BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00025831
         (1554 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006845699.1| hypothetical protein AMTR_s00019p00238660 [A...   342   3e-91
ref|XP_006473716.1| PREDICTED: pentatricopeptide repeat-containi...   335   2e-89
ref|XP_006435257.1| hypothetical protein CICLE_v10000789mg [Citr...   335   2e-89
ref|XP_004292931.1| PREDICTED: pentatricopeptide repeat-containi...   327   7e-87
ref|XP_002523825.1| pentatricopeptide repeat-containing protein,...   325   3e-86
ref|XP_006581146.1| PREDICTED: pentatricopeptide repeat-containi...   324   7e-86
ref|XP_004500913.1| PREDICTED: pentatricopeptide repeat-containi...   323   1e-85
ref|XP_003603831.1| Pentatricopeptide repeat-containing protein ...   323   2e-85
ref|XP_002307751.2| hypothetical protein POPTR_0005s26670g [Popu...   317   1e-83
gb|EXB81505.1| hypothetical protein L484_014313 [Morus notabilis]     315   3e-83
gb|ESW08118.1| hypothetical protein PHAVU_009G019800g [Phaseolus...   315   3e-83
ref|XP_006306084.1| hypothetical protein CARUB_v10011494mg [Caps...   315   4e-83
gb|EOY15135.1| Pentatricopeptide repeat (PPR) superfamily protei...   314   7e-83
ref|NP_564110.1| pentatricopeptide repeat-containing protein [Ar...   311   6e-82
ref|XP_004238390.1| PREDICTED: pentatricopeptide repeat-containi...   310   1e-81
ref|XP_006342083.1| PREDICTED: pentatricopeptide repeat-containi...   310   1e-81
ref|XP_002890377.1| pentatricopeptide repeat-containing protein ...   309   2e-81
ref|XP_006416414.1| hypothetical protein EUTSA_v10007329mg [Eutr...   306   1e-80
ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containi...   305   3e-80
gb|EMJ23046.1| hypothetical protein PRUPE_ppa1027133mg, partial ...   305   5e-80

>ref|XP_006845699.1| hypothetical protein AMTR_s00019p00238660 [Amborella trichopoda]
            gi|548848271|gb|ERN07374.1| hypothetical protein
            AMTR_s00019p00238660 [Amborella trichopoda]
          Length = 534

 Score =  342 bits (876), Expect = 3e-91
 Identities = 164/382 (42%), Positives = 240/382 (62%)
 Frame = +3

Query: 3    TKTFNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFE 182
            T  FNE+++L  K  +FD+AW++ + MK     I  ++F +LI  YV   L  E V AF 
Sbjct: 148  TSVFNEMIDLFGKVRRFDLAWELINFMKTEKLEIGVETFSMLIRRYVRAGLAAEAVHAFN 207

Query: 183  RMEEFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHD 362
            +ME++G  P    +  ++ +LC      +AQ FF+S +D+   D+  Y  LM GW   ++
Sbjct: 208  QMEDYGPKPDSIAFTIVLSVLCKKRRAQEAQSFFSSLRDRFPPDLVTYTTLMYGWCRVYN 267

Query: 363  LLSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNA 542
            +  A  V  E+K  G +PN  +YT +I+ LC  G+V  A+++F EM+ ANC PN  T NA
Sbjct: 268  IEEAERVFKEMKENGFQPNVYTYTIVIDALCRAGQVNRAYDMFREMVNANCAPNAATFNA 327

Query: 543  FVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRG 722
             +R+ VK  E+ +  +V +Q K+ G  PDV  Y  LI+  C+       +K L++MI +G
Sbjct: 328  LMRIHVKANEIEKVSQVYNQMKRMGCDPDVIAYNFLIEAHCRDDNLDKGLKVLNQMISKG 387

Query: 723  LTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVM 902
              PN S+FN +F+  + L DV GA+RLF+RM++ GC P+T TYN+LMR+F+++KSTDMV+
Sbjct: 388  CNPNASSFNLLFQCISKLKDVNGAHRLFSRMKDLGCQPNTITYNILMRMFSESKSTDMVI 447

Query: 903  RLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLET 1082
            +L++EMD  GCEP+VNTY +LI  FC  GHWN  YK  +EM EEK + PT  +Y+M+LE 
Sbjct: 448  KLKKEMDKNGCEPNVNTYRVLISTFCGIGHWNQGYKFFKEMMEEKCLRPTLPVYKMLLEQ 507

Query: 1083 LQSASEFTKVEELVQKMDSLGF 1148
            L+ A E  K EELV+ M   GF
Sbjct: 508  LRKAGEIKKHEELVEMMTEKGF 529


>ref|XP_006473716.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like [Citrus sinensis]
          Length = 538

 Score =  335 bits (860), Expect = 2e-89
 Identities = 170/380 (44%), Positives = 237/380 (62%)
 Frame = +3

Query: 12   FNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERME 191
            ++E++NL  K  +FD+AW   D MK+R   I  D+F IL+  YV   L  E V AF RME
Sbjct: 155  YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 214

Query: 192  EFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLS 371
            E+G +P    +  ++ ILC      +AQ FF+S KDK   DV +Y NL+RGW  A ++  
Sbjct: 215  EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISE 274

Query: 372  AYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVR 551
            A  V  E+K  G++PN  +Y+ +I+ LC  G++  A +VF EML   C PN  T N  +R
Sbjct: 275  AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 334

Query: 552  VLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTP 731
            V VK     +  +V +Q K+ G   D  TY  LI   CK GK +DA+K L+ M+ +G  P
Sbjct: 335  VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 394

Query: 732  NPSAFNHIFEVTAHLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLR 911
            N S FN IF   + L DV GA+R++ +M++  C+P+T TYN+LM++FA +KSTDMV++L+
Sbjct: 395  NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 454

Query: 912  QEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLETLQS 1091
            +EM+    EP+VNTY ILI M+C  GHWN AYK IREM EEK + P   +Y MVL+ L+ 
Sbjct: 455  KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 514

Query: 1092 ASEFTKVEELVQKMDSLGFS 1151
            A +  K EELV+KM   GF+
Sbjct: 515  AGQLQKHEELVEKMVDRGFT 534



 Score = 64.7 bits (156), Expect = 1e-07
 Identities = 50/244 (20%), Positives = 97/244 (39%), Gaps = 1/244 (0%)
 Frame = +3

Query: 9   TFNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERM 188
           TFN L+ +  K  + +   QV+++MK  G   +  ++  LI+ +  D   ++ ++    M
Sbjct: 328 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 387

Query: 189 EEFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKD-KVVLDVSIYNNLMRGWINAHDL 365
              G +P  + +  +   +     V  A + +   KD K   +   YN LM+ +  +   
Sbjct: 388 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 447

Query: 366 LSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAF 545
               ++  E++   + PN  +Y  LI   CG G   +A+    EM+   C          
Sbjct: 448 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC---------- 497

Query: 546 VRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGL 725
                                   L P  + YE+++Q   + G+ Q   + +++M+ RG 
Sbjct: 498 ------------------------LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 533

Query: 726 TPNP 737
           T  P
Sbjct: 534 TARP 537


>ref|XP_006435257.1| hypothetical protein CICLE_v10000789mg [Citrus clementina]
            gi|557537379|gb|ESR48497.1| hypothetical protein
            CICLE_v10000789mg [Citrus clementina]
          Length = 541

 Score =  335 bits (860), Expect = 2e-89
 Identities = 170/380 (44%), Positives = 237/380 (62%)
 Frame = +3

Query: 12   FNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERME 191
            ++E++NL  K  +FD+AW   D MK+R   I  D+F IL+  YV   L  E V AF RME
Sbjct: 158  YHEMINLAGKVRQFDLAWHFIDLMKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRME 217

Query: 192  EFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLS 371
            E+G +P    +  ++ ILC      +AQ FF+S KDK   DV +Y NL+RGW  A ++  
Sbjct: 218  EYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNISE 277

Query: 372  AYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVR 551
            A  V  E+K  G++PN  +Y+ +I+ LC  G++  A +VF EML   C PN  T N  +R
Sbjct: 278  AERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHDVFAEMLEVGCEPNSITFNNLMR 337

Query: 552  VLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTP 731
            V VK     +  +V +Q K+ G   D  TY  LI   CK GK +DA+K L+ M+ +G  P
Sbjct: 338  VHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKGCNP 397

Query: 732  NPSAFNHIFEVTAHLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLR 911
            N S FN IF   + L DV GA+R++ +M++  C+P+T TYN+LM++FA +KSTDMV++L+
Sbjct: 398  NASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVLKLK 457

Query: 912  QEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLETLQS 1091
            +EM+    EP+VNTY ILI M+C  GHWN AYK IREM EEK + P   +Y MVL+ L+ 
Sbjct: 458  KEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQLRR 517

Query: 1092 ASEFTKVEELVQKMDSLGFS 1151
            A +  K EELV+KM   GF+
Sbjct: 518  AGQLQKHEELVEKMVDRGFT 537



 Score = 64.7 bits (156), Expect = 1e-07
 Identities = 50/244 (20%), Positives = 97/244 (39%), Gaps = 1/244 (0%)
 Frame = +3

Query: 9   TFNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERM 188
           TFN L+ +  K  + +   QV+++MK  G   +  ++  LI+ +  D   ++ ++    M
Sbjct: 331 TFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSM 390

Query: 189 EEFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKD-KVVLDVSIYNNLMRGWINAHDL 365
              G +P  + +  +   +     V  A + +   KD K   +   YN LM+ +  +   
Sbjct: 391 VRKGCNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKST 450

Query: 366 LSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAF 545
               ++  E++   + PN  +Y  LI   CG G   +A+    EM+   C          
Sbjct: 451 DMVLKLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKC---------- 500

Query: 546 VRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGL 725
                                   L P  + YE+++Q   + G+ Q   + +++M+ RG 
Sbjct: 501 ------------------------LKPGSSVYEMVLQQLRRAGQLQKHEELVEKMVDRGF 536

Query: 726 TPNP 737
           T  P
Sbjct: 537 TARP 540


>ref|XP_004292931.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 529

 Score =  327 bits (839), Expect = 7e-87
 Identities = 169/379 (44%), Positives = 236/379 (62%)
 Frame = +3

Query: 12   FNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERME 191
            +NE+++L  K  +FD+AW V D MK R   I  ++F IL+  YV   L  E V AF RME
Sbjct: 144  YNEMVDLAGKVRQFDLAWHVIDLMKARNVEITVETFSILVRRYVRAGLAAEAVHAFNRME 203

Query: 192  EFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLS 371
            E+G SP    +  ++GILC      +AQ FF+S K K   DV +Y +L+ GW  A ++  
Sbjct: 204  EYGVSPDRIAFSVVIGILCKKRRASEAQAFFDSLKHKFEADVILYTSLVNGWCRAGNIAE 263

Query: 372  AYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVR 551
            A  V  E+KA G+ PN  SY+ +I+ LC  G++  A +VF EM+ A C PN  T N  +R
Sbjct: 264  AERVFNEMKAAGIEPNVYSYSIVIDALCRCGQITRAHDVFAEMIDAGCNPNSITFNNLMR 323

Query: 552  VLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTP 731
            V VK     +  +V +Q K+ G   DV TY  LI+  CK    ++A K L+ M+ +G +P
Sbjct: 324  VHVKAGRTEKVLQVYNQMKRLGCNADVITYNFLIECHCKDENVEEAAKVLNLMVKKGCSP 383

Query: 732  NPSAFNHIFEVTAHLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLR 911
            N S FN IF   A L DV GA+R++ +M++  C  +T TYNVLM++FA++KSTDMV++L+
Sbjct: 384  NASTFNPIFRCIAKLKDVNGAHRMYTKMKDLDCKANTVTYNVLMQMFAESKSTDMVLKLK 443

Query: 912  QEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLETLQS 1091
            +EMD    EP+VNTY +LI M+C  GHWN AYK  REM EEK + P+  +Y MVL+ L++
Sbjct: 444  KEMDENEVEPNVNTYKVLISMYCAMGHWNNAYKFFREMIEEKCLKPSMPVYEMVLKQLRN 503

Query: 1092 ASEFTKVEELVQKMDSLGF 1148
            A +  K EELV+KM   GF
Sbjct: 504  AGQLKKHEELVEKMVDRGF 522



 Score = 62.0 bits (149), Expect = 7e-07
 Identities = 44/207 (21%), Positives = 89/207 (42%), Gaps = 2/207 (0%)
 Frame = +3

Query: 9   TFNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERM 188
           TFN L+ +  K  + +   QV+++MK  G   +  ++  LI  +  D   +E  +    M
Sbjct: 317 TFNNLMRVHVKAGRTEKVLQVYNQMKRLGCNADVITYNFLIECHCKDENVEEAAKVLNLM 376

Query: 189 EEFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKD-KVVLDVSIYNNLMRGWINAHDL 365
            + G SP  + +  +   +     V  A + +   KD     +   YN LM+ +  +   
Sbjct: 377 VKKGCSPNASTFNPIFRCIAKLKDVNGAHRMYTKMKDLDCKANTVTYNVLMQMFAESKST 436

Query: 366 LSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCI-PNVDTVNA 542
               ++  E+    + PN  +Y  LI   C  G   +A+  F EM+   C+ P++     
Sbjct: 437 DMVLKLKKEMDENEVEPNVNTYKVLISMYCAMGHWNNAYKFFREMIEEKCLKPSMPVYEM 496

Query: 543 FVRVLVKNEEVREAFKVVSQFKQRGLM 623
            ++ L    ++++  ++V +   RG +
Sbjct: 497 VLKQLRNAGQLKKHEELVEKMVDRGFV 523


>ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223536913|gb|EEF38551.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 528

 Score =  325 bits (833), Expect = 3e-86
 Identities = 167/380 (43%), Positives = 225/380 (59%)
 Frame = +3

Query: 12   FNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERME 191
            +NE+++L  K   FD+ WQV D MK R   I  ++F ILI  YV   L  E V AF RME
Sbjct: 145  YNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILIRRYVRAGLASEAVHAFNRME 204

Query: 192  EFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLS 371
            ++   P    +  L+ ILC      +AQ FF+S KDK   DV +Y NL+RGW  A ++  
Sbjct: 205  DYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIPE 264

Query: 372  AYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVR 551
            A  V  E+K  G  PN  +YT +I+ LC  G++  A +VF EML   C PN  T N  +R
Sbjct: 265  AERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLR 324

Query: 552  VLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTP 731
            V VK     +  +V +Q K+ G  PD  TY  LI+  CK G   +A+K L+ M+ +G +P
Sbjct: 325  VHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSP 384

Query: 732  NPSAFNHIFEVTAHLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLR 911
            N S FN +F   A L DV GA+RL+ +M+   C  +T TYN+LMR+F   KSTDMV++L+
Sbjct: 385  NASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLKLK 444

Query: 912  QEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLETLQS 1091
            +EMD    EP+VNTY +LI M+C  GHWN AYK  REM EEK + P+  +Y  VL+ L+ 
Sbjct: 445  KEMDEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFFREMVEEKCLKPSLPVYEKVLQQLRK 504

Query: 1092 ASEFTKVEELVQKMDSLGFS 1151
            A +  K EELV  M   GF+
Sbjct: 505  AGQLKKHEELVAVMVDRGFA 524



 Score = 73.2 bits (178), Expect = 3e-10
 Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 2/205 (0%)
 Frame = +3

Query: 9   TFNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERM 188
           TFN LL +  K  + +   QV+++MK  G   +  ++  LI  +  D   DE ++    M
Sbjct: 318 TFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSM 377

Query: 189 EEFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKD-KVVLDVSIYNNLMRGWINAHDL 365
            + G SP  + +  L G +     V  A + +   K+ K   +   YN LMR +++    
Sbjct: 378 VKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKST 437

Query: 366 LSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCI-PNVDTVNA 542
               ++  E+    + PN  +Y  LI   CG G   +A+  F EM+   C+ P++     
Sbjct: 438 DMVLKLKKEMDEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFFREMVEEKCLKPSLPVYEK 497

Query: 543 FVRVLVKNEEVREAFKVVSQFKQRG 617
            ++ L K  ++++  ++V+    RG
Sbjct: 498 VLQQLRKAGQLKKHEELVAVMVDRG 522


>ref|XP_006581146.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like isoform X1 [Glycine max]
            gi|571458531|ref|XP_006581147.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like isoform X2 [Glycine max]
          Length = 564

 Score =  324 bits (830), Expect = 7e-86
 Identities = 162/379 (42%), Positives = 236/379 (62%)
 Frame = +3

Query: 12   FNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERME 191
            +NE+L+L  K  +FD+AW V D MK+RG  I   +F  L+  YV   L  E V AF RME
Sbjct: 181  YNEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTFSALVRRYVRAGLAAEAVHAFNRME 240

Query: 192  EFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLS 371
            ++G +P +  +  ++  LC      +AQ FF+S K +   DV +Y +L+ GW  A D+  
Sbjct: 241  DYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKHRFEPDVVVYTSLVHGWCRAGDISK 300

Query: 372  AYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVR 551
            A EV +++K  G++PN  +Y+ +I+ LC  G++  A +VF EM+ A C PN  T N+ +R
Sbjct: 301  AEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMR 360

Query: 552  VLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTP 731
            V VK     +  KV +Q K+ G   D  +Y  +I+  C+    ++A K L+ M+ +G+ P
Sbjct: 361  VHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAP 420

Query: 732  NPSAFNHIFEVTAHLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLR 911
            N S FN IF   A L+DV GA+R++ RM+   C P+T TYN+LMR+FA+++STDMV++++
Sbjct: 421  NASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVLKMK 480

Query: 912  QEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLETLQS 1091
            +EMD    EP+VNTY ILI MFCD  HWN AYK++ EM EEK + P   +Y  VLE L+ 
Sbjct: 481  KEMDESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMVEEKCLRPNLSVYETVLELLRK 540

Query: 1092 ASEFTKVEELVQKMDSLGF 1148
            A +  K EELV KM + GF
Sbjct: 541  AGQLKKHEELVDKMVARGF 559



 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 51/245 (20%), Positives = 110/245 (44%), Gaps = 2/245 (0%)
 Frame = +3

Query: 9    TFNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERM 188
            T++ +++ LC+  +   A  VF EM + G      +F  L+  +V     ++ ++ + +M
Sbjct: 319  TYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQM 378

Query: 189  EEFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKDK-VVLDVSIYNNLMRGWINAHDL 365
            +  G       Y  ++   C +  + +A K  N    K V  + S +N +       HD+
Sbjct: 379  KRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHDV 438

Query: 366  LSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAF 545
              A+ + A +K    +PN+ +Y  L+              +  EM  +   PNV+T    
Sbjct: 439  NGAHRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQVEPNVNTYRIL 498

Query: 546  VRVLVKNEEVREAFKVVSQF-KQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRG 722
            + +    +    A+K++ +  +++ L P+++ YE +++   K G+ +   + +D+M+ RG
Sbjct: 499  ISMFCDMKHWNNAYKLMMEMVEEKCLRPNLSVYETVLELLRKAGQLKKHEELVDKMVARG 558

Query: 723  LTPNP 737
                P
Sbjct: 559  FVTRP 563


>ref|XP_004500913.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like [Cicer arietinum]
          Length = 530

 Score =  323 bits (828), Expect = 1e-85
 Identities = 160/379 (42%), Positives = 236/379 (62%)
 Frame = +3

Query: 12   FNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERME 191
            +NE+++L  K   F++AW + D MK+RG  I   +F +L+  YV   L  E V AF RME
Sbjct: 147  YNEMIDLAGKLRHFELAWNLIDLMKSRGVKITVGTFAVLVRRYVRAGLAAEAVHAFNRME 206

Query: 192  EFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLS 371
            E+G +P    +  ++  LC      +AQ FF+S K +   DV +Y +L+ GW  A ++  
Sbjct: 207  EYGCTPDKVAFSIVISSLCKKRRASEAQLFFDSLKHRFEPDVIVYTSLVHGWCRAGNISK 266

Query: 372  AYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVR 551
            A EV +++K  G++PN  +Y+ +I+ LC  G++  A +VF EM+ A C PN  T N+ +R
Sbjct: 267  AEEVFSDMKVAGIKPNVYTYSIVIDSLCRSGQITRAHDVFSEMIDAGCDPNAVTFNSLMR 326

Query: 552  VLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTP 731
            V VK     +  +V +Q K+ G   D  +Y  +I+  CK     +A+K LD M+ +G+ P
Sbjct: 327  VHVKAGRTEKVLQVYNQMKRLGCAADTISYNFIIESHCKDENLDEAVKVLDTMVKKGVDP 386

Query: 732  NPSAFNHIFEVTAHLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLR 911
            N S FN IF   A L+DV GA+R++ +M+   C P+T TYN+LMR+F  +KS DMV++L+
Sbjct: 387  NASTFNSIFGCIAELHDVNGAHRMYAKMKELKCRPNTLTYNILMRMFVDSKSIDMVLKLK 446

Query: 912  QEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLETLQS 1091
            +EMD    EP+VNTY ILI MFC+ GHWN AYK+++EM EEK + P   +Y MVLE L+ 
Sbjct: 447  KEMDESQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKCLKPNLSIYEMVLEQLRK 506

Query: 1092 ASEFTKVEELVQKMDSLGF 1148
            A +  K EELV+KM + GF
Sbjct: 507  AGQLKKHEELVEKMVARGF 525



 Score = 73.6 bits (179), Expect = 2e-10
 Identities = 48/207 (23%), Positives = 97/207 (46%), Gaps = 2/207 (0%)
 Frame = +3

Query: 9   TFNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERM 188
           TFN L+ +  K  + +   QV+++MK  G   +  S+  +I  +  D   DE V+  + M
Sbjct: 320 TFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFIIESHCKDENLDEAVKVLDTM 379

Query: 189 EEFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKD-KVVLDVSIYNNLMRGWINAHDL 365
            + G  P  + +  + G +   + V  A + +   K+ K   +   YN LMR ++++  +
Sbjct: 380 VKKGVDPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCRPNTLTYNILMRMFVDSKSI 439

Query: 366 LSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCI-PNVDTVNA 542
               ++  E+    + PN  +Y  LI   C +G   +A+ +  EM+   C+ PN+     
Sbjct: 440 DMVLKLKKEMDESQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKCLKPNLSIYEM 499

Query: 543 FVRVLVKNEEVREAFKVVSQFKQRGLM 623
            +  L K  ++++  ++V +   RG +
Sbjct: 500 VLEQLRKAGQLKKHEELVEKMVARGFV 526


>ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355492879|gb|AES74082.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 530

 Score =  323 bits (827), Expect = 2e-85
 Identities = 161/379 (42%), Positives = 235/379 (62%)
 Frame = +3

Query: 12   FNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERME 191
            +NE+++L  K   FD+AW + D MK+RG  I   +F +L+  YV   L  E V AF RME
Sbjct: 146  YNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFNRME 205

Query: 192  EFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLS 371
            ++G  P    +  ++  LC      +A+ FF+S K K   DV +Y +L+ GW  A D+  
Sbjct: 206  DYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKHKFEPDVIVYTSLVHGWCRAGDIAK 265

Query: 372  AYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVR 551
            A EV +++K  G++PN  +Y+ +I+ LC  G++  A +VF EM+ A C PN  T N+ +R
Sbjct: 266  AEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMR 325

Query: 552  VLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTP 731
            V VK     +  +V +Q K+ G   D  +Y  LI+  CK     +A+K LD M+ +G+ P
Sbjct: 326  VHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAP 385

Query: 732  NPSAFNHIFEVTAHLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLR 911
            N S FN IF   A L+DV GA+R++ +M+   C P+T TYN+LMR+FA +KS DMV++L+
Sbjct: 386  NASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSIDMVLKLK 445

Query: 912  QEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLETLQS 1091
            +EMD    EP+VNTY ILI MFC+ GHWN AY +++EM EEK + P   +Y  VLE L++
Sbjct: 446  KEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLMKEMVEEKCLKPNLSIYETVLELLRN 505

Query: 1092 ASEFTKVEELVQKMDSLGF 1148
            A +  K EELV+KM + GF
Sbjct: 506  AGQLKKHEELVEKMVARGF 524



 Score = 76.6 bits (187), Expect = 3e-11
 Identities = 49/207 (23%), Positives = 99/207 (47%), Gaps = 2/207 (0%)
 Frame = +3

Query: 9   TFNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERM 188
           TFN L+ +  K  + +   QV+++MK  G   +  S+  LI  +  D   DE V+  + M
Sbjct: 319 TFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTM 378

Query: 189 EEFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKD-KVVLDVSIYNNLMRGWINAHDL 365
            + G +P  + +  + G +   + V  A + +   K+ K + +   YN LMR + ++  +
Sbjct: 379 VKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSI 438

Query: 366 LSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCI-PNVDTVNA 542
               ++  E+    + PN  +Y  LI   C +G   +A+N+  EM+   C+ PN+     
Sbjct: 439 DMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLMKEMVEEKCLKPNLSIYET 498

Query: 543 FVRVLVKNEEVREAFKVVSQFKQRGLM 623
            + +L    ++++  ++V +   RG +
Sbjct: 499 VLELLRNAGQLKKHEELVEKMVARGFV 525


>ref|XP_002307751.2| hypothetical protein POPTR_0005s26670g [Populus trichocarpa]
            gi|550339796|gb|EEE94747.2| hypothetical protein
            POPTR_0005s26670g [Populus trichocarpa]
          Length = 533

 Score =  317 bits (811), Expect = 1e-83
 Identities = 160/381 (41%), Positives = 228/381 (59%)
 Frame = +3

Query: 6    KTFNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFER 185
            + FNE+++   K   FD+AW V D MK R   I  ++F IL+  YV   L  E + AF R
Sbjct: 148  EAFNEMVDFAGKVRMFDLAWHVIDLMKARDVEITVETFSILMRRYVRAGLAAEAIHAFNR 207

Query: 186  MEEFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDL 365
            ME++   P    +  L+ ILC      +AQ+FF+S KDK   DV +Y NL+RGW  A ++
Sbjct: 208  MEDYNCKPDKIAFSILISILCRKRRASEAQEFFDSLKDKFEPDVIVYTNLVRGWCRAGNI 267

Query: 366  LSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAF 545
              A  V  E+K  G++PN  +Y+ +I+ LC  G++  A ++F EML A C PN  T N+ 
Sbjct: 268  SEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNSL 327

Query: 546  VRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGL 725
            +R+ VK     +  +V +Q K+ G  PD  TY  LI+  CK    +DA+K +  M  +G 
Sbjct: 328  MRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDENLEDAIKVIGLMAKKGC 387

Query: 726  TPNPSAFNHIFEVTAHLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMR 905
             PN S FN +F   A L DV  A+R++ +M+   C+ +T TYN LM++F  +KSTDMV++
Sbjct: 388  APNASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTLMKMFVASKSTDMVLK 447

Query: 906  LRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLETL 1085
            L+ EMD    EP+VNTY +LI M+C  GHWN AYK  REM +EK + P+  +Y MVL+ L
Sbjct: 448  LKTEMDENKIEPNVNTYKVLITMYCGMGHWNNAYKFFREMIDEKCLRPSLPVYDMVLQQL 507

Query: 1086 QSASEFTKVEELVQKMDSLGF 1148
            + A +  K EELV+KM   GF
Sbjct: 508  RKAGQLKKHEELVEKMVDRGF 528


>gb|EXB81505.1| hypothetical protein L484_014313 [Morus notabilis]
          Length = 535

 Score =  315 bits (808), Expect = 3e-83
 Identities = 161/379 (42%), Positives = 227/379 (59%)
 Frame = +3

Query: 12   FNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERME 191
            +NEL++L  K  +FD+AW V D MK R   I  ++F IL+  YV      E V AF RM+
Sbjct: 152  YNELVDLAGKVRQFDLAWHVLDLMKTRNVEITIETFSILVRRYVRAGFAAEAVHAFNRMD 211

Query: 192  EFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLS 371
            ++G  P    +  ++  LC      +AQ FF+  KDK   DV +Y NL+ GW  A ++  
Sbjct: 212  DYGCKPDKIAFSVVISNLCKKRRATEAQSFFDGLKDKFEPDVVLYTNLIHGWCRAGNISE 271

Query: 372  AYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVR 551
            A  V +E+K  G++PN  +YT +I+ LC  G++    +VF EM+   C PN  T N  +R
Sbjct: 272  AESVFSEMKKAGIKPNVYTYTIVIDALCRCGQITRGHDVFSEMIDVGCQPNAVTFNNLMR 331

Query: 552  VLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTP 731
            V VK    ++  +V +Q K+     DV TY  L+   CK     DA K L+ M+ +G  P
Sbjct: 332  VHVKAGRTQKVLQVFNQMKRLKCEADVITYNFLVDCHCKDENLDDAAKVLNLMVKKGCNP 391

Query: 732  NPSAFNHIFEVTAHLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLR 911
            N S FN IF + A L DV  A+R++ +M+   C P+T TYNVLM++FA++KS DMV++L+
Sbjct: 392  NSSTFNPIFRLVAKLKDVNAAHRMYAKMKELKCKPNTVTYNVLMQMFAESKSMDMVLKLK 451

Query: 912  QEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLETLQS 1091
            +EMD    EP+VNTY +LI MFC  GHWN AY+  REM EEK + P+  +Y MVLE L+ 
Sbjct: 452  EEMDESEVEPNVNTYRVLIVMFCGMGHWNNAYRFFREMIEEKCLKPSFPVYEMVLEQLRK 511

Query: 1092 ASEFTKVEELVQKMDSLGF 1148
            A +  K EELV+KM + GF
Sbjct: 512  AGQLKKHEELVEKMVARGF 530



 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 44/207 (21%), Positives = 91/207 (43%), Gaps = 2/207 (0%)
 Frame = +3

Query: 9   TFNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERM 188
           TFN L+ +  K  +     QVF++MK      +  ++  L++ +  D   D+  +    M
Sbjct: 325 TFNNLMRVHVKAGRTQKVLQVFNQMKRLKCEADVITYNFLVDCHCKDENLDDAAKVLNLM 384

Query: 189 EEFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKD-KVVLDVSIYNNLMRGWINAHDL 365
            + G +P  + +  +  ++     V  A + +   K+ K   +   YN LM+ +  +  +
Sbjct: 385 VKKGCNPNSSTFNPIFRLVAKLKDVNAAHRMYAKMKELKCKPNTVTYNVLMQMFAESKSM 444

Query: 366 LSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCI-PNVDTVNA 542
               ++  E+    + PN  +Y  LI   CG G   +A+  F EM+   C+ P+      
Sbjct: 445 DMVLKLKEEMDESEVEPNVNTYRVLIVMFCGMGHWNNAYRFFREMIEEKCLKPSFPVYEM 504

Query: 543 FVRVLVKNEEVREAFKVVSQFKQRGLM 623
            +  L K  ++++  ++V +   RG +
Sbjct: 505 VLEQLRKAGQLKKHEELVEKMVARGFV 531


>gb|ESW08118.1| hypothetical protein PHAVU_009G019800g [Phaseolus vulgaris]
          Length = 530

 Score =  315 bits (807), Expect = 3e-83
 Identities = 158/379 (41%), Positives = 234/379 (61%)
 Frame = +3

Query: 12   FNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERME 191
            ++E+L+L  K   FD+AW V D MK RG  I   +F  L+  YV   L  E V AF RME
Sbjct: 147  YDEMLDLAGKLRHFDLAWHVIDLMKTRGVEISVHTFSALVRRYVRAGLAAEAVHAFNRME 206

Query: 192  EFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLS 371
            ++G +P    +  ++  LC      +AQ FF S K K   DV +Y +L+ GW  A ++  
Sbjct: 207  DYGCTPDKVAFSIVISSLCKKRRANEAQSFFESLKHKFEPDVLVYTSLVYGWCRAGNISK 266

Query: 372  AYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVR 551
            A EV +++K  G++PN  +Y+ +I+ LC  G++  A +VF EM+ + C PN  T N+ +R
Sbjct: 267  AEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFAEMIDSGCDPNAVTFNSLMR 326

Query: 552  VLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTP 731
            V VK     +  +V +Q K+ G   D  +Y  +I+  C+     +A+K L+ M+ +G+ P
Sbjct: 327  VHVKAGRTEKVLQVHNQMKRLGCPADTISYNFIIESHCRDENLDEAVKILNLMVKKGVAP 386

Query: 732  NPSAFNHIFEVTAHLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLR 911
            N S FN +F   A L+DV GA+R++ RM+   C P+T TYN+LMR+FA++KSTDMV++++
Sbjct: 387  NASTFNCVFGCIAKLHDVNGAHRMYARMKELKCQPNTLTYNILMRMFAESKSTDMVLKMK 446

Query: 912  QEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLETLQS 1091
            +EMD    EP+VNTY ILI MFC+  HWN AYK+++EM EEK + P   +Y  VLE L++
Sbjct: 447  KEMDENQVEPNVNTYRILISMFCEMKHWNNAYKLVKEMVEEKCLRPNLSVYETVLELLRN 506

Query: 1092 ASEFTKVEELVQKMDSLGF 1148
            A +  K EELV KM + GF
Sbjct: 507  AGQLKKHEELVDKMVARGF 525



 Score = 65.9 bits (159), Expect = 5e-08
 Identities = 53/246 (21%), Positives = 113/246 (45%), Gaps = 3/246 (1%)
 Frame = +3

Query: 9    TFNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERM 188
            T++ +++ LC+  +   A  VF EM + G      +F  L+  +V     ++ ++   +M
Sbjct: 285  TYSIVIDSLCRCGQITRAHDVFAEMIDSGCDPNAVTFNSLMRVHVKAGRTEKVLQVHNQM 344

Query: 189  EEFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKDK-VVLDVSIYNNLMRGWINAHDL 365
            +  G       Y  ++   C +  + +A K  N    K V  + S +N +       HD+
Sbjct: 345  KRLGCPADTISYNFIIESHCRDENLDEAVKILNLMVKKGVAPNASTFNCVFGCIAKLHDV 404

Query: 366  LSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCI-PNVDTVNA 542
              A+ + A +K    +PN+ +Y  L+  +  E K  D      + +  N + PNV+T   
Sbjct: 405  NGAHRMYARMKELKCQPNTLTYNILMR-MFAESKSTDMVLKMKKEMDENQVEPNVNTYRI 463

Query: 543  FVRVLVKNEEVREAFKVVSQF-KQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGR 719
             + +  + +    A+K+V +  +++ L P+++ YE +++     G+ +   + +D+M+ R
Sbjct: 464  LISMFCEMKHWNNAYKLVKEMVEEKCLRPNLSVYETVLELLRNAGQLKKHEELVDKMVAR 523

Query: 720  GLTPNP 737
            G    P
Sbjct: 524  GFVTRP 529



 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 42/177 (23%), Positives = 79/177 (44%)
 Frame = +3

Query: 615  GLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTPNPSAFNHIFEVTAHLNDVKGA 794
            G  P    Y+ ++    KL  +  A   +D M  RG+  +   F+ +            A
Sbjct: 139  GFPPSPEPYDEMLDLAGKLRHFDLAWHVIDLMKTRGVEISVHTFSALVRRYVRAGLAAEA 198

Query: 795  YRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLRQEMDAKGCEPDVNTYTILIKM 974
               FNRME+ GC PD   +++++    + +  +      + +  K  EPDV  YT L+  
Sbjct: 199  VHAFNRMEDYGCTPDKVAFSIVISSLCKKRRANEAQSFFESLKHK-FEPDVLVYTSLVYG 257

Query: 975  FCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLETLQSASEFTKVEELVQKMDSLG 1145
            +C  G+ + A ++  +M +  GI P    Y +V+++L    + T+  ++  +M   G
Sbjct: 258  WCRAGNISKAEEVFSDM-KMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFAEMIDSG 313


>ref|XP_006306084.1| hypothetical protein CARUB_v10011494mg [Capsella rubella]
            gi|482574795|gb|EOA38982.1| hypothetical protein
            CARUB_v10011494mg [Capsella rubella]
          Length = 532

 Score =  315 bits (806), Expect = 4e-83
 Identities = 158/378 (41%), Positives = 230/378 (60%)
 Frame = +3

Query: 12   FNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERME 191
            +NE+++L  K  +FD+AW + D MK+R   I  ++F ILI  YV   L  E V  F RME
Sbjct: 149  YNEMIDLAGKVRQFDLAWHLIDLMKSRNVEISIETFTILIKRYVRAGLASEAVHCFNRME 208

Query: 192  EFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLS 371
            ++G  P    +  ++ IL       +AQ FF+S KD+   DV +Y NL+RGW  A ++  
Sbjct: 209  DYGCVPDKIAFSIVISILSRKRRATEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISE 268

Query: 372  AYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVR 551
            A  V  E+K  G+ PN  +Y+ +I+ LC  G++  A +VF +ML + C PN  T N  +R
Sbjct: 269  AERVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMR 328

Query: 552  VLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTP 731
            V VK     +  +V +Q K+ G  PD  TY  LI+  C+    ++A+K L+ MI +    
Sbjct: 329  VHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKNCDV 388

Query: 732  NPSAFNHIFEVTAHLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLR 911
            N S FN IF       DV GA+R++++M  + C+P+T TYN+LMR+FA +KSTDMV++++
Sbjct: 389  NASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVLKMK 448

Query: 912  QEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLETLQS 1091
            +EM+ K  EP+VNTY +L+ MFC  GHWN AYK+ +EM EEK + P+  LY MVL  L+ 
Sbjct: 449  KEMEDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLSQLRK 508

Query: 1092 ASEFTKVEELVQKMDSLG 1145
            A +  K EELV+KM   G
Sbjct: 509  AGQLKKHEELVEKMIQKG 526



 Score = 69.7 bits (169), Expect = 3e-09
 Identities = 51/245 (20%), Positives = 110/245 (44%), Gaps = 2/245 (0%)
 Frame = +3

Query: 9    TFNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERM 188
            T++ +++ LC+  +   A  VF +M + G      +F  L+  +V     ++ ++ + +M
Sbjct: 287  TYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQM 346

Query: 189  EEFGYSPTVADYVELMGILCNNNFVIDAQKFFNSF-KDKVVLDVSIYNNLMRGWINAHDL 365
            ++ G  P    Y  L+   C +  + +A K  N+  K    ++ S +N + R      D+
Sbjct: 347  KKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKNCDVNASTFNTIFRYIEKKRDV 406

Query: 366  LSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAF 545
              A+ + +++      PN+ +Y  L+    G         +  EM      PNV+T    
Sbjct: 407  NGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVLKMKKEMEDKEVEPNVNTYRLL 466

Query: 546  VRVLVKNEEVREAFKVVSQF-KQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRG 722
            V +         A+K+  +  +++ L P ++ YE+++    K G+ +   + +++MI +G
Sbjct: 467  VTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLSQLRKAGQLKKHEELVEKMIQKG 526

Query: 723  LTPNP 737
            L   P
Sbjct: 527  LVARP 531


>gb|EOY15135.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 532

 Score =  314 bits (804), Expect = 7e-83
 Identities = 162/379 (42%), Positives = 226/379 (59%)
 Frame = +3

Query: 12   FNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERME 191
            +NE+++L  K   FD+AW + D MK +   +  ++F ILI  YV   L  E V AF RME
Sbjct: 149  YNEMIDLAGKLRHFDLAWHLIDLMKAKNVDVSIETFSILIRRYVRAGLAAEAVHAFNRME 208

Query: 192  EFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLS 371
            ++G  P    +  ++  LC      +AQ FF+  KD    DV +Y +L+ GW  A ++  
Sbjct: 209  DYGCVPDKIAFSIVISSLCKKRRAEEAQTFFDKLKDNFEPDVILYTSLINGWCRARNISE 268

Query: 372  AYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVR 551
            A  V  E+K  G++PN  SYT +I+ LC  G++  A +VF EM+   C PN  T N  +R
Sbjct: 269  AERVFKEMKMAGIKPNVYSYTIVIDALCRCGQITRAHDVFAEMIDVGCEPNSITFNNLMR 328

Query: 552  VLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTP 731
            V VK     +  +V +Q K+ G   D  TY  LI+  C+     +A+K L+ MI +   P
Sbjct: 329  VHVKAGRTEKVLQVYNQMKRCGCPADTITYNFLIESHCRDDNLDEAIKVLNLMIKKECIP 388

Query: 732  NPSAFNHIFEVTAHLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLR 911
            NPS FN IF+    L DV  A+R++ +M++  C P+T TYN+LMR+FA  KSTDMV++L+
Sbjct: 389  NPSTFNTIFKCIEKLQDVNAAHRMYAKMKDLNCRPNTVTYNILMRMFAGAKSTDMVLKLK 448

Query: 912  QEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLETLQS 1091
            +EMD    EP+VNTY ILI M+C  GHWN AYK   EM EEKG+ P+  LY+MVLE L+ 
Sbjct: 449  KEMDENEVEPNVNTYRILITMYCGKGHWNNAYKFFNEMIEEKGLKPSMSLYQMVLEQLRK 508

Query: 1092 ASEFTKVEELVQKMDSLGF 1148
            A +  K EELV+KM   GF
Sbjct: 509  AEQLKKHEELVEKMVDRGF 527



 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 47/207 (22%), Positives = 91/207 (43%), Gaps = 2/207 (0%)
 Frame = +3

Query: 9   TFNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERM 188
           TFN L+ +  K  + +   QV+++MK  G   +  ++  LI  +  D   DE ++    M
Sbjct: 322 TFNNLMRVHVKAGRTEKVLQVYNQMKRCGCPADTITYNFLIESHCRDDNLDEAIKVLNLM 381

Query: 189 EEFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSI-YNNLMRGWINAHDL 365
            +    P  + +  +   +     V  A + +   KD      ++ YN LMR +  A   
Sbjct: 382 IKKECIPNPSTFNTIFKCIEKLQDVNAAHRMYAKMKDLNCRPNTVTYNILMRMFAGAKST 441

Query: 366 LSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCI-PNVDTVNA 542
               ++  E+    + PN  +Y  LI   CG+G   +A+  F EM+    + P++     
Sbjct: 442 DMVLKLKKEMDENEVEPNVNTYRILITMYCGKGHWNNAYKFFNEMIEEKGLKPSMSLYQM 501

Query: 543 FVRVLVKNEEVREAFKVVSQFKQRGLM 623
            +  L K E++++  ++V +   RG +
Sbjct: 502 VLEQLRKAEQLKKHEELVEKMVDRGFV 528


>ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g20300, mitochondrial; Flags: Precursor
            gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity
            to a hypothetical protein T3P18.15 gi|5454201 from
            Arabidopsis thaliana BAC T3P18 gb|AC005698 and contains
            multiple PPR PF|01535 repeats [Arabidopsis thaliana]
            gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8
            [Arabidopsis thaliana] gi|15450347|gb|AAK96467.1|
            At1g20300/F14O10_8 [Arabidopsis thaliana]
            gi|332191838|gb|AEE29959.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 537

 Score =  311 bits (796), Expect = 6e-82
 Identities = 157/378 (41%), Positives = 229/378 (60%)
 Frame = +3

Query: 12   FNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERME 191
            +NE+++L  K  +FD+AW + D MK+R   I  ++F ILI  YV   L  E V  F RME
Sbjct: 154  YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213

Query: 192  EFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLS 371
            ++G  P    +  ++  L       +AQ FF+S KD+   DV +Y NL+RGW  A ++  
Sbjct: 214  DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISE 273

Query: 372  AYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVR 551
            A +V  E+K  G+ PN  +Y+ +I+ LC  G++  A +VF +ML + C PN  T N  +R
Sbjct: 274  AEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMR 333

Query: 552  VLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTP 731
            V VK     +  +V +Q K+ G  PD  TY  LI+  C+    ++A+K L+ MI +    
Sbjct: 334  VHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEV 393

Query: 732  NPSAFNHIFEVTAHLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLR 911
            N S FN IF       DV GA+R++++M  + C+P+T TYN+LMR+F  +KSTDMV++++
Sbjct: 394  NASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMK 453

Query: 912  QEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLETLQS 1091
            +EMD K  EP+VNTY +L+ MFC  GHWN AYK+ +EM EEK + P+  LY MVL  L+ 
Sbjct: 454  KEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRR 513

Query: 1092 ASEFTKVEELVQKMDSLG 1145
            A +  K EELV+KM   G
Sbjct: 514  AGQLKKHEELVEKMIQKG 531



 Score = 69.7 bits (169), Expect = 3e-09
 Identities = 51/245 (20%), Positives = 111/245 (45%), Gaps = 2/245 (0%)
 Frame = +3

Query: 9    TFNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERM 188
            T++ +++ LC+  +   A  VF +M + G      +F  L+  +V     ++ ++ + +M
Sbjct: 292  TYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQM 351

Query: 189  EEFGYSPTVADYVELMGILCNNNFVIDAQKFFNSF-KDKVVLDVSIYNNLMRGWINAHDL 365
            ++ G  P    Y  L+   C +  + +A K  N+  K K  ++ S +N + R      D+
Sbjct: 352  KKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDV 411

Query: 366  LSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAF 545
              A+ + +++      PN+ +Y  L+    G         +  EM      PNV+T    
Sbjct: 412  NGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLL 471

Query: 546  VRVLVKNEEVREAFKVVSQF-KQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRG 722
            V +         A+K+  +  +++ L P ++ YE+++    + G+ +   + +++MI +G
Sbjct: 472  VTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKG 531

Query: 723  LTPNP 737
            L   P
Sbjct: 532  LVARP 536


>ref|XP_004238390.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like [Solanum lycopersicum]
          Length = 543

 Score =  310 bits (794), Expect = 1e-81
 Identities = 155/380 (40%), Positives = 226/380 (59%)
 Frame = +3

Query: 12   FNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERME 191
            +NE+++L  K  +FD+AW + D MK +   I  ++F ILI  YV   L  E V  F RME
Sbjct: 160  YNEMIDLAGKVRQFDVAWHLIDSMKLKNIKIPIETFSILIRRYVRAGLASEAVHTFNRME 219

Query: 192  EFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLS 371
            ++   P    +  ++GILC      +AQ FF+S KDK   DV +Y +L+ GW  A ++  
Sbjct: 220  DYDCKPDRNAFSVVVGILCKKRRAAEAQSFFDSLKDKFEADVVLYTSLVHGWCRAGNISE 279

Query: 372  AYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVR 551
            A  +  ++K  G++PN  +Y+ +I+ LC  G+   A++VF EM+   C PN  T N  +R
Sbjct: 280  AERIFRDMKDAGVQPNVYTYSIVIDALCRSGQTTRAYDVFSEMIDVGCQPNAITFNNLMR 339

Query: 552  VLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTP 731
            V VK     +  +V +Q K+    PDV TY  LI   C+     +A+K ++ M  +G  P
Sbjct: 340  VHVKAGRTEKVLQVYNQMKRLSCDPDVITYNFLIDARCRDENRDEALKVVNVMAKKGCEP 399

Query: 732  NPSAFNHIFEVTAHLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLR 911
            N S FN IF   A   DV  A+RL+ +M+   C P+T T N+LM++FA++KSTDMV +++
Sbjct: 400  NASTFNPIFRCIAKARDVNAAHRLYAKMKELNCKPNTVTCNILMKMFAESKSTDMVFKIK 459

Query: 912  QEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLETLQS 1091
             EMD    EP+VNT+ ILI M+C  GHWN AYK  REM EE+ + P+E +Y MVL+ L+ 
Sbjct: 460  NEMDENEVEPNVNTFKILISMYCGMGHWNNAYKYFREMIEERCLRPSESVYDMVLKQLRK 519

Query: 1092 ASEFTKVEELVQKMDSLGFS 1151
            A +  K EELV+KM   GF+
Sbjct: 520  AGQLRKHEELVEKMVDRGFA 539


>ref|XP_006342083.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like [Solanum tuberosum]
          Length = 549

 Score =  310 bits (793), Expect = 1e-81
 Identities = 156/380 (41%), Positives = 226/380 (59%)
 Frame = +3

Query: 12   FNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERME 191
            +NE+++L  K  +FD+AW + D MK +   I  ++F ILI  YV   L  E V  F RME
Sbjct: 166  YNEMIDLAGKVRQFDVAWHLIDSMKLKNIKIPIETFSILIRRYVRAGLASEAVHTFNRME 225

Query: 192  EFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLS 371
            ++   P    +  ++GILC      +AQ FF+S KDK   DV +Y +L+ GW  A ++  
Sbjct: 226  DYDCKPDRNAFSIVIGILCKKRRAAEAQSFFDSLKDKFEADVVLYTSLVHGWCRAGNISE 285

Query: 372  AYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVR 551
            A  +  ++K  G++PN  +Y+ +I+ LC  G+   A++VF EM+   C PN  T N  +R
Sbjct: 286  AERIFRDMKDAGVQPNVYTYSIVIDALCRSGQTTRAYDVFSEMIDVGCQPNAITFNNLMR 345

Query: 552  VLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTP 731
            V VK     +  +V +Q K+    PDV TY  LI   C+     +A+K ++ M  +   P
Sbjct: 346  VHVKAGRTEKVLQVYNQMKRLSCSPDVITYNFLIDAHCRDENRDEALKVVNVMAKKRCEP 405

Query: 732  NPSAFNHIFEVTAHLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLR 911
            N S FN IF   A   DV  A+RL+ +M+   C P+T T N+LM++F ++KSTDMV++LR
Sbjct: 406  NASTFNPIFRCIAKARDVNAAHRLYAKMKELNCKPNTVTCNILMKMFVESKSTDMVIKLR 465

Query: 912  QEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLETLQS 1091
            +EMD    EP+VNT+ ILI M+C  GHWN AYK  REM EEK + P+E +Y MVL+ L+ 
Sbjct: 466  KEMDENEVEPNVNTFKILISMYCGMGHWNNAYKYFREMIEEKCLRPSESVYDMVLKQLRK 525

Query: 1092 ASEFTKVEELVQKMDSLGFS 1151
            A +  K EELV+KM   GF+
Sbjct: 526  AGQLRKHEELVEKMVDRGFA 545


>ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297336219|gb|EFH66636.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 537

 Score =  309 bits (791), Expect = 2e-81
 Identities = 156/378 (41%), Positives = 230/378 (60%)
 Frame = +3

Query: 12   FNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERME 191
            +NE+++L  K  +FD+AW + D MK+R   I  ++F ILI  YV   L  E V  F RME
Sbjct: 154  YNEMIDLAGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213

Query: 192  EFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLS 371
            ++G  P    +  ++  L       +AQ FF+S KD+   DV +Y NL+RGW  A ++  
Sbjct: 214  DYGCVPDQIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISE 273

Query: 372  AYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVR 551
            A +V  ++K  G+ PN  +Y+ +I+ LC  G++  A +VF +ML + C PN  T N  +R
Sbjct: 274  AEKVFKDMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMR 333

Query: 552  VLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTP 731
            V VK     +  +V +Q K+ G  PD  TY  LI+  C+    ++A+K L+ MI +    
Sbjct: 334  VHVKAGRPEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKKCEV 393

Query: 732  NPSAFNHIFEVTAHLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLR 911
            N S FN IF       DV GA+R++++M  + C+P+T TYN+LMR+FA +KSTDMV++++
Sbjct: 394  NASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVLKMK 453

Query: 912  QEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLETLQS 1091
            ++MD K  EP+VNTY +L+ MFC  GHWN AYK+ +EM EEK + P+  LY MVL  L+ 
Sbjct: 454  KDMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRR 513

Query: 1092 ASEFTKVEELVQKMDSLG 1145
            A +  K EELV+KM   G
Sbjct: 514  AGQLKKHEELVEKMIQKG 531



 Score = 72.0 bits (175), Expect = 6e-10
 Identities = 51/245 (20%), Positives = 112/245 (45%), Gaps = 2/245 (0%)
 Frame = +3

Query: 9    TFNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERM 188
            T++ +++ LC+  +   A  VF +M + G      +F  L+  +V    P++ ++ + +M
Sbjct: 292  TYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQM 351

Query: 189  EEFGYSPTVADYVELMGILCNNNFVIDAQKFFNSF-KDKVVLDVSIYNNLMRGWINAHDL 365
            ++ G  P    Y  L+   C +  + +A K  N+  K K  ++ S +N + R      D+
Sbjct: 352  KKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDV 411

Query: 366  LSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAF 545
              A+ + +++      PN+ +Y  L+    G         +  +M      PNV+T    
Sbjct: 412  NGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVLKMKKDMDDKEVEPNVNTYRLL 471

Query: 546  VRVLVKNEEVREAFKVVSQF-KQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRG 722
            V +         A+K+  +  +++ L P ++ YE+++    + G+ +   + +++MI +G
Sbjct: 472  VTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKG 531

Query: 723  LTPNP 737
            L   P
Sbjct: 532  LVTRP 536


>ref|XP_006416414.1| hypothetical protein EUTSA_v10007329mg [Eutrema salsugineum]
            gi|557094185|gb|ESQ34767.1| hypothetical protein
            EUTSA_v10007329mg [Eutrema salsugineum]
          Length = 534

 Score =  306 bits (785), Expect = 1e-80
 Identities = 154/374 (41%), Positives = 224/374 (59%)
 Frame = +3

Query: 12   FNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERME 191
            +NE+++L  K   FD+AW + D MK+R   I  ++F ILI  YV   L  E V  F RME
Sbjct: 151  YNEMIDLAGKVRHFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 210

Query: 192  EFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLS 371
            ++G  P    +  ++ IL       +AQ FF+S KDK   DV +Y NL+RGW  A ++  
Sbjct: 211  DYGCVPDKIAFSIVISILSRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGEISE 270

Query: 372  AYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVR 551
            A  V  E+K  G+ PN  +Y+ +I+ LC  G++  A +VF +M+   C PN  T N  +R
Sbjct: 271  AERVFKEMKVAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMIDCGCAPNAITFNNLMR 330

Query: 552  VLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTP 731
              VK     +  +V +Q K+ G   D  TY  LI+  C+ G  ++A+K L+ MI +    
Sbjct: 331  AHVKAGRTEKVLQVYNQMKKLGCEADTITYNFLIETHCRDGNLENAVKVLNSMIKKRCEV 390

Query: 732  NPSAFNHIFEVTAHLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLR 911
            N S FN IF       DV GA+R++++M  + C+ +T TYN+LMR+F ++KSTDMV++++
Sbjct: 391  NASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEANTVTYNILMRMFVESKSTDMVLKMK 450

Query: 912  QEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLETLQS 1091
            +EMD K  EP+VNTY +L+ M+C  GHW+ AYK  REM EEK + P+  LY MVL  L+ 
Sbjct: 451  KEMDEKEVEPNVNTYRLLVTMYCGMGHWSNAYKFFREMVEEKCLIPSLSLYEMVLAQLRK 510

Query: 1092 ASEFTKVEELVQKM 1133
            A +  K EELV+KM
Sbjct: 511  AGQLKKHEELVEKM 524



 Score = 60.1 bits (144), Expect = 3e-06
 Identities = 49/245 (20%), Positives = 108/245 (44%), Gaps = 2/245 (0%)
 Frame = +3

Query: 9    TFNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERM 188
            T++ +++ LC+  +   A  VF +M + G      +F  L+  +V     ++ ++ + +M
Sbjct: 289  TYSIVIDALCRCGQISRAHDVFADMIDCGCAPNAITFNNLMRAHVKAGRTEKVLQVYNQM 348

Query: 189  EEFGYSPTVADYVELMGILCNNNFVIDAQKFFNSF-KDKVVLDVSIYNNLMRGWINAHDL 365
            ++ G       Y  L+   C +  + +A K  NS  K +  ++ S +N + R      D+
Sbjct: 349  KKLGCEADTITYNFLIETHCRDGNLENAVKVLNSMIKKRCEVNASTFNTIFRYIEKKRDV 408

Query: 366  LSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAF 545
              A+ + +++       N+ +Y  L+              +  EM      PNV+T    
Sbjct: 409  NGAHRMYSKMMEAKCEANTVTYNILMRMFVESKSTDMVLKMKKEMDEKEVEPNVNTYRLL 468

Query: 546  VRVLVKNEEVREAFKVVSQF-KQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRG 722
            V +         A+K   +  +++ L+P ++ YE+++    K G+ +   + +++MI +G
Sbjct: 469  VTMYCGMGHWSNAYKFFREMVEEKCLIPSLSLYEMVLAQLRKAGQLKKHEELVEKMIHKG 528

Query: 723  LTPNP 737
            L   P
Sbjct: 529  LVARP 533


>ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like [Cucumis sativus]
            gi|449519964|ref|XP_004167004.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like [Cucumis sativus]
          Length = 534

 Score =  305 bits (781), Expect = 3e-80
 Identities = 157/380 (41%), Positives = 224/380 (58%)
 Frame = +3

Query: 12   FNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFERME 191
            +NE+++L  K  +F +AW + D MK R   I   +F +L+  YV   L  E V AF RME
Sbjct: 151  YNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRME 210

Query: 192  EFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHDLLS 371
            ++G +  +  +  ++ ILC     ++AQ FF++ K K   DV +Y +L+ GW  A D+  
Sbjct: 211  DYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHKFEPDVIVYTSLVHGWCRAGDISE 270

Query: 372  AYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNAFVR 551
            A  V  E+K  G+ PN  +Y+ +I+ LC  G++  A +VF EML A C PN  T N  +R
Sbjct: 271  AESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIR 330

Query: 552  VLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRGLTP 731
            V ++     +  +V +Q K+     D+ TY  LI+  CK     +A+K L+ M     TP
Sbjct: 331  VHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTP 390

Query: 732  NPSAFNHIFEVTAHLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVMRLR 911
            N S+FN IF   A   DV GA+R+F RM+  GC P+T TYN+LMR+FA  KS DM+ +L+
Sbjct: 391  NASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLK 450

Query: 912  QEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLETLQS 1091
            +EMD +  EP+ NTY  LI ++C  GHWN AY   REM +EK I P+  LY+MVLE L+ 
Sbjct: 451  KEMDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFREMIDEKCIKPSMPLYKMVLEELRK 510

Query: 1092 ASEFTKVEELVQKMDSLGFS 1151
            A +  K EELV KM   GF+
Sbjct: 511  AGQLKKHEELVDKMVERGFA 530


>gb|EMJ23046.1| hypothetical protein PRUPE_ppa1027133mg, partial [Prunus persica]
          Length = 536

 Score =  305 bits (780), Expect = 5e-80
 Identities = 156/382 (40%), Positives = 226/382 (59%)
 Frame = +3

Query: 3    TKTFNELLNLLCKYCKFDIAWQVFDEMKNRGFTIEFDSFRILINGYVMDSLPDEGVRAFE 182
            ++ +NE+++L  K  +FD+AW V D MK R   I  ++F  L+  YV   L  E V AF 
Sbjct: 142  SEPYNEMVDLAGKVRQFDLAWHVIDLMKARNVEITVETFSNLVRRYVRAGLAAEAVLAFN 201

Query: 183  RMEEFGYSPTVADYVELMGILCNNNFVIDAQKFFNSFKDKVVLDVSIYNNLMRGWINAHD 362
            RMEE+G  P    +  ++GILC      +AQ FF+S K K   DV +Y +L+ GW  A +
Sbjct: 202  RMEEYGCKPDKIAFSVVIGILCKKRRASEAQSFFDSLKHKYEPDVILYTSLVNGWCRAGN 261

Query: 363  LLSAYEVLAEIKAQGLRPNSESYTCLIEGLCGEGKVKDAWNVFCEMLGANCIPNVDTVNA 542
            +  A  +  +++  G+ PN  +Y+ +I+ LC  G++  A +VF EM+   C PN  T N 
Sbjct: 262  IAEAERIFRDMRTAGINPNVYTYSIVIDALCRCGQITRAHDVFAEMIDDGCQPNSVTFNN 321

Query: 543  FVRVLVKNEEVREAFKVVSQFKQRGLMPDVTTYELLIQGCCKLGKWQDAMKQLDEMIGRG 722
             +RV  K     +  +V +Q ++ G   DV TY  LI+  CK     DA K  D M+ +G
Sbjct: 322  LMRVHAKAGRTEKVLQVYNQMQRLGCNADVITYNFLIECHCKDDNLADAHKVFDSMVKKG 381

Query: 723  LTPNPSAFNHIFEVTAHLNDVKGAYRLFNRMENSGCDPDTQTYNVLMRLFAQNKSTDMVM 902
             +PN S FN IF  TA L DV GA+RL+ R++   C+ +T TYN+LM++F  +KST MV+
Sbjct: 382  FSPNASTFNPIFRCTAKLKDVNGAHRLYARVKELKCELNTVTYNILMQMFVVSKSTHMVL 441

Query: 903  RLRQEMDAKGCEPDVNTYTILIKMFCDFGHWNMAYKIIREMTEEKGIPPTEELYRMVLET 1082
            +++ EM+    EP+VNTY ILI M+C  GHWN AY   REM EEK + P+ ++Y  VL+ 
Sbjct: 442  KMKMEMEENEVEPNVNTYNILISMYCAMGHWNKAYSFFREMIEEKCLKPSLQVYETVLKQ 501

Query: 1083 LQSASEFTKVEELVQKMDSLGF 1148
            L+ A +  K EELV+KM   GF
Sbjct: 502  LREAGQLKKHEELVEKMVDRGF 523