BLASTX nr result

ID: Ephedra28_contig00025795 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00025795
         (478 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17758.1| unknown [Picea sitchensis]                              59   5e-07

>gb|ABR17758.1| unknown [Picea sitchensis]
          Length = 890

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
 Frame = -3

Query: 476 MDDFSWDKFPSSEDHMVPDSSDIEDEWGVKRRHWKLMYSEGYPTMPI----QEQHRTGDH 309
           +DD  WD F  S+DH+VPD  D ++        W + Y     ++ +     EQ   G+ 
Sbjct: 9   IDDVVWDGFEQSDDHIVPDPEDTQE------GTWMVKYDNRKKSLNVLSKSTEQKPVGNK 62

Query: 308 KLFXXXXXXXXXXXSCEREPSSLPVGMDMWNSLDDMDMSKAEYNTICFEADMEIDESKGI 129
            +            + + EPS+  + MD W   D  D  +A YN +  ++ M I   +G+
Sbjct: 63  NVLHREKEEVMACSNGKEEPSTQLLDMDTW--CDAQDEKQATYNLMHTDSGMGIKSGQGV 120

Query: 128 PNEGFNKDVKMEHENANILLGNCR-------GDVLLGENSIDLDSSS 9
             + +  D+K+     ++++G C+       GD +LG+    + S+S
Sbjct: 121 GGDCYT-DIKLGSAENDLIIGICKEDSILENGDSVLGDRDATIMSNS 166


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