BLASTX nr result
ID: Ephedra28_contig00025713
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00025713
(948 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006840364.1| hypothetical protein AMTR_s00045p00120010 [A... 141 3e-31
ref|XP_004958450.1| PREDICTED: DNA annealing helicase and endonu... 63 1e-07
gb|EPS71202.1| hypothetical protein M569_03554, partial [Genlise... 62 4e-07
ref|XP_006488975.1| PREDICTED: uncharacterized protein LOC102607... 59 4e-06
ref|XP_006488715.1| PREDICTED: SWI/SNF-related matrix-associated... 59 4e-06
ref|XP_006419207.1| hypothetical protein CICLE_v10004488mg [Citr... 59 4e-06
ref|XP_006393444.1| hypothetical protein EUTSA_v10011287mg [Eutr... 59 4e-06
gb|AAD49766.2|AC007932_14 Contains similarity to HARP gene from ... 58 6e-06
ref|NP_175265.3| chromatin remodeling factor18 [Arabidopsis thal... 58 6e-06
>ref|XP_006840364.1| hypothetical protein AMTR_s00045p00120010 [Amborella trichopoda]
gi|548842082|gb|ERN02039.1| hypothetical protein
AMTR_s00045p00120010 [Amborella trichopoda]
Length = 908
Score = 141 bits (356), Expect = 3e-31
Identities = 86/239 (35%), Positives = 131/239 (54%), Gaps = 3/239 (1%)
Frame = -3
Query: 709 DDEWNLSVEELENLEQEAKRKMAERQKXXXXXXXXXXXXXXTGTARAIPFSVMQSPSKRT 530
+D+W S EEL+++E+EA +++A + FS QSPSK
Sbjct: 2 EDDWGFSAEELDSMEKEALKRVAVKNT----------------------FSSSQSPSKSP 39
Query: 529 PGMVSVKIFKESVNKVGVETQYNKDLVLHLKTIPGHEWDQNQRIWKFPEEQAPNICRLLK 350
V++KIF++S ++ ++TQYN +L+ LK++ GHEWDQ++RIW +PE Q N+ L
Sbjct: 40 SQKVTIKIFRDSPGRIALQTQYNTELLHVLKSVVGHEWDQSRRIWTYPESQLENLEVALS 99
Query: 349 ALPAVVENINAVPPL--NLTSILESHDSSGSTCSLKIGSQNAQSMQLHECS-KSSPYKAI 179
+L ++ +I+ V P+ +L S+ +G T I + +Q C SP
Sbjct: 100 SLKDIISSISMVSPIRSHLRSV-----QAGCTLEQSI-LRELPPVQGSGCGIPCSP---- 149
Query: 178 ETVNSIIRSSPQTQKTSFIVQIYEISPDRIAAKSIYNEKVKAACQSVPGRQWNAEHKVW 2
+ + SPQ K V +Y I DR+AA+S YNE++K ACQSV GRQWNAE +VW
Sbjct: 150 DLGSKGKGLSPQNMKGQIRVVLYLIGQDRVAAQSPYNERIKEACQSVKGRQWNAEERVW 208
>ref|XP_004958450.1| PREDICTED: DNA annealing helicase and endonuclease ZRANB3-like
isoform X2 [Setaria italica]
Length = 674
Score = 63.2 bits (152), Expect = 1e-07
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Frame = -3
Query: 712 DDDEWNLSVEELENLEQEAKRKMAERQKXXXXXXXXXXXXXXTGTARAI-----PFSVMQ 548
DDD+W+LS E+L+ +E++A R++AER+ G + F++
Sbjct: 14 DDDDWDLSAEQLDQIERDAIRQLAERKASSSAASTAPVPAPALGAVSPLFILFFSFAIQV 73
Query: 547 SPSKRTPGMVSVKIFKESVNKVGVETQYNKDLVLHLKTIPGHEWDQNQRIWKFPEEQAPN 368
+ S+ + VSV +F S + + Y++ LV + IP W+ +RIW FP
Sbjct: 74 NNSQGSAPKVSVHLFLHSSGVIAAKFPYHQLLVDACRKIPKASWNAKERIWMFPPSSLSI 133
Query: 367 ICRLLKALPAVVENINAVPPL---NLTSILESHDSSG 266
+L ++ + + + PL L + L S D G
Sbjct: 134 AEEVLDSVHGLAVEVRKLDPLVQRALVAALASKDLRG 170
>gb|EPS71202.1| hypothetical protein M569_03554, partial [Genlisea aurea]
Length = 643
Score = 61.6 bits (148), Expect = 4e-07
Identities = 48/148 (32%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Frame = -3
Query: 706 DEWNLSVEELENLEQEAKRKMAERQKXXXXXXXXXXXXXXTGTAR-----AIPFSVMQSP 542
D+W LS EEL++LE+EA +++AER + TAR P S S
Sbjct: 3 DDWELSAEELDSLEREALKQLAERN---CSGVSATSSSVTSSTARPHESATAPPSPFFSG 59
Query: 541 SKRTPGMVSV-KIFKESVNKVGVETQYNKDLVLHLKTIPGHEWDQNQRIWKFPEEQAPNI 365
K T + SV K F + + + QY K LV IPG W+ +R+W FP P
Sbjct: 60 MKMTDHLKSVVKFFLHASGNIAAKFQYEKLLVGAFHNIPGAIWNAKERVWMFPLASLPCA 119
Query: 364 CRLLKALPAVVENINAVPPLNLTSILES 281
+L LP I + PL +I S
Sbjct: 120 ETVLLDLPGYNVEIENLDPLVRRAITAS 147
>ref|XP_006488975.1| PREDICTED: uncharacterized protein LOC102607681 [Citrus sinensis]
Length = 156
Score = 58.5 bits (140), Expect = 4e-06
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 7/142 (4%)
Frame = -3
Query: 709 DDEWNLSVEELENLEQEAKRKMAERQKXXXXXXXXXXXXXXTGTARAIPFSVMQSP---- 542
DDEW S EEL+ LE+EA +++A+R +R +P SV P
Sbjct: 4 DDEWEFSAEELDFLEREALQQIAQRHSKPFSDSPSYKVEALPQGSRTLPLSVAPPPKGSL 63
Query: 541 ---SKRTPGMVSVKIFKESVNKVGVETQYNKDLVLHLKTIPGHEWDQNQRIWKFPEEQAP 371
SK +SVK + + + + Y+ LV + IP W+ +R+W FP
Sbjct: 64 GDFSKEQVPKLSVKFYFHTSGNIAAKFTYDPVLVGAFRKIPKATWNAKERLWTFPVPFLS 123
Query: 370 NICRLLKALPAVVENINAVPPL 305
+ ++L + I + PL
Sbjct: 124 SAEKVLSEISGYNVEIENLHPL 145
>ref|XP_006488715.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1-like
[Citrus sinensis]
Length = 666
Score = 58.5 bits (140), Expect = 4e-06
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 7/142 (4%)
Frame = -3
Query: 709 DDEWNLSVEELENLEQEAKRKMAERQKXXXXXXXXXXXXXXTGTARAIPFSVMQSP---- 542
DDEW S EEL+ LE+EA +++A+R +R +P SV P
Sbjct: 4 DDEWEFSAEELDFLEREALQQIAQRHSKPFSDSPSYKVEALPQGSRTLPLSVAPPPKGSL 63
Query: 541 ---SKRTPGMVSVKIFKESVNKVGVETQYNKDLVLHLKTIPGHEWDQNQRIWKFPEEQAP 371
SK +SVK + + + + Y+ LV + IP W+ +R+W FP
Sbjct: 64 GDFSKEQVPKLSVKFYFHTSGNIAAKFTYDPVLVGAFRKIPKATWNAKERLWTFPVPFLS 123
Query: 370 NICRLLKALPAVVENINAVPPL 305
+ ++L + I + PL
Sbjct: 124 SAEKVLSEISGYNVEIENLHPL 145
>ref|XP_006419207.1| hypothetical protein CICLE_v10004488mg [Citrus clementina]
gi|557521080|gb|ESR32447.1| hypothetical protein
CICLE_v10004488mg [Citrus clementina]
Length = 666
Score = 58.5 bits (140), Expect = 4e-06
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 7/142 (4%)
Frame = -3
Query: 709 DDEWNLSVEELENLEQEAKRKMAERQKXXXXXXXXXXXXXXTGTARAIPFSVMQSP---- 542
DDEW S EEL+ LE+EA +++A+R +R +P SV P
Sbjct: 4 DDEWEFSAEELDFLEREALQQIAQRHSKPFSDSPSYKVEALPQGSRTLPLSVAPPPKGSL 63
Query: 541 ---SKRTPGMVSVKIFKESVNKVGVETQYNKDLVLHLKTIPGHEWDQNQRIWKFPEEQAP 371
SK +SVK + + + + Y+ LV + IP W+ +R+W FP
Sbjct: 64 GDFSKEQVPKLSVKFYFHTSGNIAAKFTYDPVLVGAFRKIPKATWNAKERLWTFPVPFLS 123
Query: 370 NICRLLKALPAVVENINAVPPL 305
+ ++L + I + PL
Sbjct: 124 SAEKVLSEISGYNVEIENLHPL 145
>ref|XP_006393444.1| hypothetical protein EUTSA_v10011287mg [Eutrema salsugineum]
gi|557090022|gb|ESQ30730.1| hypothetical protein
EUTSA_v10011287mg [Eutrema salsugineum]
Length = 673
Score = 58.5 bits (140), Expect = 4e-06
Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 7/144 (4%)
Frame = -3
Query: 715 MDDDEWNLSVEELENLEQEAKRKMAER--QKXXXXXXXXXXXXXXTGTARAIPFSVMQSP 542
MDDD W+L++EE++ LE+EA +K+ ++ GT R +P + P
Sbjct: 1 MDDDFWDLTIEEMDALEKEAIQKINQKGNSSSSSLRTPNEVPISSQGT-RFLPSILAPKP 59
Query: 541 -----SKRTPGMVSVKIFKESVNKVGVETQYNKDLVLHLKTIPGHEWDQNQRIWKFPEEQ 377
SK VSVKI + + YN+ +V ++ IP W+ +R+W FP+
Sbjct: 60 NTGEGSKEPEQKVSVKILLHHSGDLAAKFLYNQAVVDAVRKIPKAIWNAKERLWIFPQSS 119
Query: 376 APNICRLLKALPAVVENINAVPPL 305
+ ++L+ + +V I + PL
Sbjct: 120 LSSAEKILREVSSVKVEIENLDPL 143
>gb|AAD49766.2|AC007932_14 Contains similarity to HARP gene from Homo sapiens gb|AF210842. It
contains SNF2 N-terminal PF|00176 and helicase
C-terminal PF|00271 domains [Arabidopsis thaliana]
Length = 592
Score = 57.8 bits (138), Expect = 6e-06
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 10/140 (7%)
Frame = -3
Query: 709 DDEWNLSVEELENLEQEAKRKMAERQKXXXXXXXXXXXXXXTGT--ARAIPFSVMQSP-- 542
DD W+L+VEE++ +E EA +++ +++ T + AR +P ++ P
Sbjct: 2 DDFWDLTVEEMDAIENEALQRINQQRNSSSSSSLPIPNEVHTSSQGARILPSTLAPKPNT 61
Query: 541 ---SKRTPGMVSVKIFKESVNKVGVETQYNKDLVLHLKTIPGHEWDQNQRIWKFPE---E 380
SK VSVKI S + + YN+ +V ++ IP W+ +R+W FP
Sbjct: 62 DAGSKPQEQKVSVKILLHSSGVLAAKFPYNQVVVDAVRKIPKAIWNAKERLWTFPHSSLS 121
Query: 379 QAPNICRLLKALPAVVENIN 320
A NI R + ++ +EN++
Sbjct: 122 SAENILREISSVKVEIENLD 141
>ref|NP_175265.3| chromatin remodeling factor18 [Arabidopsis thaliana]
gi|332194152|gb|AEE32273.1| chromatin remodeling
factor18 [Arabidopsis thaliana]
Length = 673
Score = 57.8 bits (138), Expect = 6e-06
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 10/140 (7%)
Frame = -3
Query: 709 DDEWNLSVEELENLEQEAKRKMAERQKXXXXXXXXXXXXXXTGT--ARAIPFSVMQSP-- 542
DD W+L+VEE++ +E EA +++ +++ T + AR +P ++ P
Sbjct: 2 DDFWDLTVEEMDAIENEALQRINQQRNSSSSSSLPIPNEVHTSSQGARILPSTLAPKPNT 61
Query: 541 ---SKRTPGMVSVKIFKESVNKVGVETQYNKDLVLHLKTIPGHEWDQNQRIWKFPE---E 380
SK VSVKI S + + YN+ +V ++ IP W+ +R+W FP
Sbjct: 62 DAGSKPQEQKVSVKILLHSSGVLAAKFPYNQVVVDAVRKIPKAIWNAKERLWTFPHSSLS 121
Query: 379 QAPNICRLLKALPAVVENIN 320
A NI R + ++ +EN++
Sbjct: 122 SAENILREISSVKVEIENLD 141