BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00025703
         (560 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40240.3| unnamed protein product [Vitis vinifera]              150   3e-34
emb|CAN77122.1| hypothetical protein VITISV_013624 [Vitis vinifera]   150   3e-34
gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsi...   148   8e-34
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   147   2e-33
emb|CAN68235.1| hypothetical protein VITISV_037104 [Vitis vinifera]   146   3e-33
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]   146   3e-33
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   146   4e-33
emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]        145   5e-33
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]   145   9e-33
gb|EFA05312.1| hypothetical protein TcasGA2_TC015470 [Tribolium ...   143   2e-32
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         140   2e-31
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   140   2e-31
ref|XP_006603607.1| PREDICTED: uncharacterized protein LOC100791...   139   4e-31
dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsi...   139   4e-31
gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s...   139   4e-31
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   139   5e-31
gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ...   139   6e-31
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   138   8e-31
ref|XP_002064813.1| GK15001 [Drosophila willistoni] gi|194160898...   138   1e-30
gb|ACI62137.1| polyprotein [Drosophila melanogaster]                  137   1e-30

>emb|CBI40240.3| unnamed protein product [Vitis vinifera]
          Length = 2196

 Score =  150 bits (378), Expect = 3e-34
 Identities = 75/187 (40%), Positives = 108/187 (57%), Gaps = 3/187 (1%)
 Frame = -1

Query: 560  GHINSKYLRRIKK---YSNLKELKFFDEKCEYCCKEKSHKLPFPKTVSNKTSRPLQLIHS 390
            GH N K LR +++     ++ E+    + CE C   K  + PFP+ +S K +  L+LI+S
Sbjct: 470  GHFNLKSLRFMQEAGMVEDMPEISVNAQTCESCELGKQQRQPFPQNMSKKATHKLELINS 529

Query: 389  DLCGPMETMKRKRQRYFQCFIDDYTKMNWVYLMHSKDQFFGILKSFHKEIQNKLNMKIVT 210
            D+CGPM T       YF  FIDD ++M WVY + +K Q   + KSF K ++ +    +  
Sbjct: 530  DICGPMSTASLSNNVYFALFIDDLSRMTWVYFLKTKSQVLSVFKSFKKMVETQSGQNVKV 589

Query: 209  LRTD*GAELISKGMEEFYKQKGIIRELTSPYNPQQNRVVERRNRTIVEMIHAMLN*SGLS 30
            LRTD G E ISK +  F ++ GI+ +L +PY+PQQN V ER+NRT++EM   ML    L 
Sbjct: 590  LRTDNGGEYISKELNVFCQEAGIVHQLIAPYSPQQNGVFERKNRTVMEMARCMLFEKKLP 649

Query: 29   KSRWGYA 9
            K  W  A
Sbjct: 650  KLLWAEA 656


>emb|CAN77122.1| hypothetical protein VITISV_013624 [Vitis vinifera]
          Length = 1269

 Score =  150 bits (378), Expect = 3e-34
 Identities = 74/187 (39%), Positives = 108/187 (57%), Gaps = 3/187 (1%)
 Frame = -1

Query: 560  GHINSKYLRRIKK---YSNLKELKFFDEKCEYCCKEKSHKLPFPKTVSNKTSRPLQLIHS 390
            GH N K LR +++     ++ E+    + CE C   K  + PFP+ +S + +  L+LIHS
Sbjct: 451  GHFNLKSLRFMQEAGMVEDMPEISVNAQTCESCELGKQQRQPFPQNMSKRATHKLELIHS 510

Query: 389  DLCGPMETMKRKRQRYFQCFIDDYTKMNWVYLMHSKDQFFGILKSFHKEIQNKLNMKIVT 210
            D+CGPM T       YF  FIDD+++M WVY + +K Q   + KSF K ++ +    +  
Sbjct: 511  DICGPMSTTSLSNNVYFALFIDDFSRMTWVYFLKTKSQVLSMFKSFKKMVETQSGQNVKV 570

Query: 209  LRTD*GAELISKGMEEFYKQKGIIRELTSPYNPQQNRVVERRNRTIVEMIHAMLN*SGLS 30
            LRTD G E  SK    F ++ GI+ +LT+PY+PQQN V +R+NRT++EM   ML    L 
Sbjct: 571  LRTDNGGEYTSKEFSVFCQEAGIVHQLTAPYSPQQNGVSKRKNRTVMEMARCMLFEKKLP 630

Query: 29   KSRWGYA 9
            K  W  A
Sbjct: 631  KLLWAEA 637


>gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 822

 Score =  148 bits (374), Expect = 8e-34
 Identities = 76/184 (41%), Positives = 101/184 (54%)
 Frame = -1

Query: 560 GHINSKYLRRIKKYSNLKELKFFDEKCEYCCKEKSHKLPFPKTVSNKTSRPLQLIHSDLC 381
           GH N K L+  +  + L +    + KCE C   K  + PFPK    +    L+LIHSD+C
Sbjct: 168 GHSNLKILQSKEMVTGLPKFNVEEGKCESCILSKHSRDPFPKESETRAKHKLELIHSDVC 227

Query: 380 GPMETMKRKRQRYFQCFIDDYTKMNWVYLMHSKDQFFGILKSFHKEIQNKLNMKIVTLRT 201
           GPM+       RY   FIDD T+M WVY + +K + F   K F   ++N  N +I  LR 
Sbjct: 228 GPMQNSSINGSRYILTFIDDATRMVWVYFLKAKSEVFQTFKKFKNLVENNANCRIKKLRI 287

Query: 200 D*GAELISKGMEEFYKQKGIIRELTSPYNPQQNRVVERRNRTIVEMIHAMLN*SGLSKSR 21
           D G E +SK   EF +  GI R+LT+ Y+PQQN V ERRNR++VEM  AM+    L    
Sbjct: 288 DRGTEYLSKEFSEFLEGNGIERQLTAAYSPQQNEVSERRNRSLVEMARAMIKAKDLPLKL 347

Query: 20  WGYA 9
           W  A
Sbjct: 348 WAEA 351


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  147 bits (370), Expect = 2e-33
 Identities = 76/183 (41%), Positives = 107/183 (58%), Gaps = 2/183 (1%)
 Frame = -1

Query: 560 GHINSKYLRRIKKYSNLKELKFFDEK--CEYCCKEKSHKLPFPKTVSNKTSRPLQLIHSD 387
           GH+N K L+ + K   +  L   D    CE C   K  K PFPK  S + S  L++IH+D
Sbjct: 445 GHLNVKGLKLLSKKEMVFGLPKIDSVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHAD 504

Query: 386 LCGPMETMKRKRQRYFQCFIDDYTKMNWVYLMHSKDQFFGILKSFHKEIQNKLNMKIVTL 207
           LCGPM+T      RYF  F DD+++M+WVY + SK + F   K F   ++ +    I  L
Sbjct: 505 LCGPMQTASFGGSRYFLLFTDDHSRMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVL 564

Query: 206 RTD*GAELISKGMEEFYKQKGIIRELTSPYNPQQNRVVERRNRTIVEMIHAMLN*SGLSK 27
           RTD G E +S   + F +++G+ RELT+PY+P+QN V ER+NRT+VEM  +M+    LS 
Sbjct: 565 RTDRGGEFLSNDFKVFCEEEGLHRELTTPYSPEQNGVAERKNRTVVEMARSMMKAKNLSN 624

Query: 26  SRW 18
             W
Sbjct: 625 HFW 627


>emb|CAN68235.1| hypothetical protein VITISV_037104 [Vitis vinifera]
          Length = 2041

 Score =  146 bits (369), Expect = 3e-33
 Identities = 73/186 (39%), Positives = 106/186 (56%), Gaps = 3/186 (1%)
 Frame = -1

Query: 557  HINSKYLRRIKK---YSNLKELKFFDEKCEYCCKEKSHKLPFPKTVSNKTSRPLQLIHSD 387
            H N K LR +++     ++ E+    + CE C   K  + PFP+ +S + +  L+LIHSD
Sbjct: 1185 HFNLKSLRFMQEAXMVEDMPEISVNAQTCESCELGKQQRQPFPQNMSKRATHKLELIHSD 1244

Query: 386  LCGPMETMKRKRQRYFQCFIDDYTKMNWVYLMHSKDQFFGILKSFHKEIQNKLNMKIVTL 207
            +CGPM T       YF  FIDD+++M WVY + +K Q   + KSF K ++ +    +  L
Sbjct: 1245 ICGPMSTTSLSNNVYFALFIDDFSRMTWVYFLKTKSQVLSMFKSFKKMVETQSGQXVKVL 1304

Query: 206  RTD*GAELISKGMEEFYKQKGIIRELTSPYNPQQNRVVERRNRTIVEMIHAMLN*SGLSK 27
            RTD G E  SK    F ++ GI+ +LT+PY+PQ N V ER+NRT++EM   ML    L K
Sbjct: 1305 RTDNGGEYTSKEFSVFCQEAGIVHQLTAPYSPQXNGVSERKNRTVMEMARCMLFEKKLPK 1364

Query: 26   SRWGYA 9
              W  A
Sbjct: 1365 LLWAEA 1370


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score =  146 bits (369), Expect = 3e-33
 Identities = 76/183 (41%), Positives = 107/183 (58%), Gaps = 2/183 (1%)
 Frame = -1

Query: 560  GHINSKYLRRIKKYSNLKELKFFDEK--CEYCCKEKSHKLPFPKTVSNKTSRPLQLIHSD 387
            GH+N K L+ + K   + EL   D    CE C   K  K PFPK  S + S  L++IH+D
Sbjct: 556  GHLNVKGLKLLSKKEMVFELPKIDSVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHAD 615

Query: 386  LCGPMETMKRKRQRYFQCFIDDYTKMNWVYLMHSKDQFFGILKSFHKEIQNKLNMKIVTL 207
            LCGPM+T      RYF  F DD+++M+WVY + SK + F   K F   ++ +    I  L
Sbjct: 616  LCGPMQTASFGGSRYFLLFTDDHSRMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVL 675

Query: 206  RTD*GAELISKGMEEFYKQKGIIRELTSPYNPQQNRVVERRNRTIVEMIHAMLN*SGLSK 27
            RTD   E +S   + F +++G+ RELT+PY+P+QN V ER+NRT+VEM  +M+    LS 
Sbjct: 676  RTDRXGEFLSNDFKVFCEEEGLHRELTTPYSPEQNGVAERKNRTVVEMARSMMXAKNLSN 735

Query: 26   SRW 18
              W
Sbjct: 736  HFW 738


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  146 bits (368), Expect = 4e-33
 Identities = 76/183 (41%), Positives = 106/183 (57%), Gaps = 2/183 (1%)
 Frame = -1

Query: 560 GHINSKYLRRIKKYSNLKELKFFDEK--CEYCCKEKSHKLPFPKTVSNKTSRPLQLIHSD 387
           GH+N K L+ + K   +  L   D    CE C   K  K PFPK  S + S  L++IH+D
Sbjct: 430 GHLNVKGLKLLSKKEMVFGLPKIDSVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHAD 489

Query: 386 LCGPMETMKRKRQRYFQCFIDDYTKMNWVYLMHSKDQFFGILKSFHKEIQNKLNMKIVTL 207
           LCGPM+T      RYF  F DD+++M+WVY + SK + F   K F   ++ +    I  L
Sbjct: 490 LCGPMQTASFGGSRYFLLFTDDHSRMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVL 549

Query: 206 RTD*GAELISKGMEEFYKQKGIIRELTSPYNPQQNRVVERRNRTIVEMIHAMLN*SGLSK 27
           RTD G E +S   + F +++G+ RELT+PY+P QN V ER+NRT+VEM  +M+    LS 
Sbjct: 550 RTDRGGEFLSNDFKVFXEEEGLHRELTTPYSPXQNGVAERKNRTVVEMARSMMKAKNLSN 609

Query: 26  SRW 18
             W
Sbjct: 610 HFW 612


>emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]
          Length = 1358

 Score =  145 bits (367), Expect = 5e-33
 Identities = 78/185 (42%), Positives = 110/185 (59%)
 Frame = -1

Query: 557  HINSKYLRRIKKYSNLKELKFFDEKCEYCCKEKSHKLPFPKTVSNKTSRPLQLIHSDLCG 378
            H N K + +++    LK      EKCE C K K  K PFP      TS  L+LIHSD+C 
Sbjct: 501  HTNIKNIEKMQTKGLLKLNDKDFEKCETCVKSKFTKKPFPSVPKRNTSL-LELIHSDICE 559

Query: 377  PMETMKRKRQRYFQCFIDDYTKMNWVYLMHSKDQFFGILKSFHKEIQNKLNMKIVTLRTD 198
                + R  +RYF  F DD ++  +VYL+HSKD+ F   K +  E++ +   +I  LR+D
Sbjct: 560  LNGVLTRGGKRYFISFCDDSSRYLYVYLLHSKDEAFEAFKIYKAEVEKQKEKRIKILRSD 619

Query: 197  *GAELISKGMEEFYKQKGIIRELTSPYNPQQNRVVERRNRTIVEMIHAMLN*SGLSKSRW 18
             G E  ++  + F +++GII E T+PY PQQN + ER+NRT+VEM + MLN SGL ++ W
Sbjct: 620  RGGEYFNRRFDAFCEEEGIIHERTAPYTPQQNGLAERKNRTLVEMANCMLNQSGLPRNMW 679

Query: 17   GYACL 3
            G A L
Sbjct: 680  GEAVL 684


>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score =  145 bits (365), Expect = 9e-33
 Identities = 75/183 (40%), Positives = 107/183 (58%), Gaps = 2/183 (1%)
 Frame = -1

Query: 560 GHINSKYLRRIKKYSNLKELKFFDEK--CEYCCKEKSHKLPFPKTVSNKTSRPLQLIHSD 387
           GH+N K L+ + K   +  L   D    CE C   K  K PFPK  S + S  L++IH+D
Sbjct: 379 GHLNVKGLKLLSKKEMVFGLPKIDSVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHAD 438

Query: 386 LCGPMETMKRKRQRYFQCFIDDYTKMNWVYLMHSKDQFFGILKSFHKEIQNKLNMKIVTL 207
           LCGPM+T      RYF  F +D+++M+WVY + SK + F   K F   ++ +    I  L
Sbjct: 439 LCGPMQTASFGGSRYFLLFTNDHSRMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVL 498

Query: 206 RTD*GAELISKGMEEFYKQKGIIRELTSPYNPQQNRVVERRNRTIVEMIHAMLN*SGLSK 27
           RTD G E +S   + F +++G+ RELT+PY+P+QN V ER+NRT+VEM  +M+    LS 
Sbjct: 499 RTDRGGEFLSNDFKVFCEEEGLHRELTTPYSPEQNGVAERKNRTVVEMARSMMKAKNLSN 558

Query: 26  SRW 18
             W
Sbjct: 559 HFW 561


>gb|EFA05312.1| hypothetical protein TcasGA2_TC015470 [Tribolium castaneum]
          Length = 2375

 Score =  143 bits (361), Expect = 2e-32
 Identities = 81/192 (42%), Positives = 104/192 (54%), Gaps = 6/192 (3%)
 Frame = -1

Query: 560 GHINSKYLRRIKKYSNLKELKFFDEKC------EYCCKEKSHKLPFPKTVSNKTSRPLQL 399
           GH+++K L  + K + +  L   +  C      E C K K  KLPF K   NKT+R L+L
Sbjct: 413 GHLSNKNLVTLSKNNMVSGLNIRNSNCNESQICEVCVKSKITKLPFGKRSDNKTTRVLEL 472

Query: 398 IHSDLCGPMETMKRKRQRYFQCFIDDYTKMNWVYLMHSKDQFFGILKSFHKEIQNKLNMK 219
           IHSDLCGP+       +RYF  F+DDYT    VYL+ SK + F   K F   +      K
Sbjct: 473 IHSDLCGPITPETHDGKRYFLTFLDDYTHFCVVYLLKSKSEVFEYFKCFESMVSAMFGTK 532

Query: 218 IVTLRTD*GAELISKGMEEFYKQKGIIRELTSPYNPQQNRVVERRNRTIVEMIHAMLN*S 39
           I TL+ D G E +   +  F K KGII + T PY P+QN   ER NRT++E   AM+  S
Sbjct: 533 IATLKCDNGREYLPNDLVSFCKGKGIIIKTTIPYTPEQNGKAERLNRTLLEKARAMILES 592

Query: 38  GLSKSRWGYACL 3
            LSK  WG A L
Sbjct: 593 ELSKDLWGEAIL 604


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  140 bits (354), Expect = 2e-31
 Identities = 71/187 (37%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
 Frame = -1

Query: 560  GHINSKYLRRIKKYSNLKELKFFD---EKCEYCCKEKSHKLPFPKTVSNKTSRPLQLIHS 390
            GH+N   L  + +   ++ L   +   + CE C   K  K+ FPK  S++  +PL+LIH+
Sbjct: 473  GHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHT 532

Query: 389  DLCGPMETMKRKRQRYFQCFIDDYTKMNWVYLMHSKDQFFGILKSFHKEIQNKLNMKIVT 210
            D+CGP++     +  YF  FIDD+++  WVY +  K + F I K F   ++ +  + I T
Sbjct: 533  DVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKT 592

Query: 209  LRTD*GAELISKGMEEFYKQKGIIRELTSPYNPQQNRVVERRNRTIVEMIHAMLN*SGLS 30
            +R+D G E  SK   ++ +  GI R+LT P +PQQN VVER+NRTI+EM  +ML    L 
Sbjct: 593  MRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLP 652

Query: 29   KSRWGYA 9
            K  W  A
Sbjct: 653  KELWAEA 659


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  140 bits (354), Expect = 2e-31
 Identities = 71/187 (37%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
 Frame = -1

Query: 560  GHINSKYLRRIKKYSNLKELKFFD---EKCEYCCKEKSHKLPFPKTVSNKTSRPLQLIHS 390
            GH+N   L  + +   ++ L   +   + CE C   K  K+ FPK  S++  +PL+LIH+
Sbjct: 473  GHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHT 532

Query: 389  DLCGPMETMKRKRQRYFQCFIDDYTKMNWVYLMHSKDQFFGILKSFHKEIQNKLNMKIVT 210
            D+CGP++     +  YF  FIDD+++  WVY +  K + F I K F   ++ +  + I T
Sbjct: 533  DVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKT 592

Query: 209  LRTD*GAELISKGMEEFYKQKGIIRELTSPYNPQQNRVVERRNRTIVEMIHAMLN*SGLS 30
            +R+D G E  SK   ++ +  GI R+LT P +PQQN VVER+NRTI+EM  +ML    L 
Sbjct: 593  MRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLP 652

Query: 29   KSRWGYA 9
            K  W  A
Sbjct: 653  KELWAEA 659


>ref|XP_006603607.1| PREDICTED: uncharacterized protein LOC100791776 [Glycine max]
          Length = 1976

 Score =  139 bits (351), Expect = 4e-31
 Identities = 69/187 (36%), Positives = 100/187 (53%), Gaps = 3/187 (1%)
 Frame = -1

Query: 560  GHINSKYLRRIKKYSNLKELKFFDEK---CEYCCKEKSHKLPFPKTVSNKTSRPLQLIHS 390
            GH+N   L+ ++K + +  L   +E    C  CC+ K  +  +   +  + ++ L +IHS
Sbjct: 660  GHLNFNSLKMLQKKNMVVGLPQIEEPKKICGKCCEGKQPRKSYKSAIPTRATKKLAIIHS 719

Query: 389  DLCGPMETMKRKRQRYFQCFIDDYTKMNWVYLMHSKDQFFGILKSFHKEIQNKLNMKIVT 210
            D+CGP E        YF  FIDDYTK  W+YL+  K + F I K F   ++ + +  I  
Sbjct: 720  DVCGPFEAKSIGGNSYFVSFIDDYTKKMWIYLIQKKSEVFSIFKQFKLLVEKQYDSSIKL 779

Query: 209  LRTD*GAELISKGMEEFYKQKGIIRELTSPYNPQQNRVVERRNRTIVEMIHAMLN*SGLS 30
            LRTD G E  S   E+FYK +GI  E+ +PY PQ N  +ERRNRT++ M+  ML    L 
Sbjct: 780  LRTDGGGEYTSHEFEDFYKNEGIAHEVMAPYTPQHNGTLERRNRTLLNMVRCMLREKNLP 839

Query: 29   KSRWGYA 9
               W  A
Sbjct: 840  HKFWAEA 846


>dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1499

 Score =  139 bits (351), Expect = 4e-31
 Identities = 71/187 (37%), Positives = 106/187 (56%), Gaps = 3/187 (1%)
 Frame = -1

Query: 560  GHINS---KYLRRIKKYSNLKELKFFDEKCEYCCKEKSHKLPFPKTVSNKTSRPLQLIHS 390
            GH+N    + ++ +K    L + +     C  C   K  +  FPK   + T++ L+LIHS
Sbjct: 462  GHVNYDKIETMQTLKIVEKLPKFEVIKGICAACEMGKQSRRSFPKKSQSNTNKTLELIHS 521

Query: 389  DLCGPMETMKRKRQRYFQCFIDDYTKMNWVYLMHSKDQFFGILKSFHKEIQNKLNMKIVT 210
            D+CGPM+T      RYF  FIDD+++M WVY + +K +     K F   ++N+   +I  
Sbjct: 522  DVCGPMQTESINGSRYFLTFIDDFSRMTWVYFLKNKSEVITKFKIFKPYVENQSESRIKR 581

Query: 209  LRTD*GAELISKGMEEFYKQKGIIRELTSPYNPQQNRVVERRNRTIVEMIHAMLN*SGLS 30
            LRTD G E +S+   +  ++ GI  E+T+PY+PQQN V ERRNRT+VEM  +M+    LS
Sbjct: 582  LRTDGGGEFLSREFIKLCQESGIHHEITTPYSPQQNGVAERRNRTLVEMARSMIEEKKLS 641

Query: 29   KSRWGYA 9
               W  A
Sbjct: 642  NKFWAEA 648


>gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1038

 Score =  139 bits (351), Expect = 4e-31
 Identities = 74/187 (39%), Positives = 112/187 (59%), Gaps = 1/187 (0%)
 Frame = -1

Query: 560  GHINSKYLRRIKKYSNLKELKFFDE-KCEYCCKEKSHKLPFPKTVSNKTSRPLQLIHSDL 384
            GH+N   +R++K    +   +  +  KC  C + K HK PF K V  +T+  L+LI+SDL
Sbjct: 473  GHVNFASIRKLKDMRLINTSETHETGKCPVCIESKFHKKPF-KPVEYRTTELLELIYSDL 531

Query: 383  CGPMETMKRKRQRYFQCFIDDYTKMNWVYLMHSKDQFFGILKSFHKEIQNKLNMKIVTLR 204
                 T  R  + Y+  F+DDY++   +YL+ +K++   +   F  E +N+L  +I  LR
Sbjct: 532  ADFRTTASRGGKNYYVSFVDDYSRFTKIYLIKTKNEAVSMFVKFKAESENQLGKRIKRLR 591

Query: 203  TD*GAELISKGMEEFYKQKGIIRELTSPYNPQQNRVVERRNRTIVEMIHAMLN*SGLSKS 24
            +D G E   K ++EF +  GII E T+PY+PQQN + ER+NRT+ EM++AML  SGLS +
Sbjct: 592  SDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDN 651

Query: 23   RWGYACL 3
             WG A L
Sbjct: 652  MWGEAVL 658


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  139 bits (350), Expect = 5e-31
 Identities = 70/187 (37%), Positives = 106/187 (56%), Gaps = 3/187 (1%)
 Frame = -1

Query: 560  GHINSKYLRRIKKYSNLKELKFFD---EKCEYCCKEKSHKLPFPKTVSNKTSRPLQLIHS 390
            GH+N   L  + +   ++ L   +   + CE C   K  K+ FPK  S++  +PL+LIH+
Sbjct: 473  GHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHT 532

Query: 389  DLCGPMETMKRKRQRYFQCFIDDYTKMNWVYLMHSKDQFFGILKSFHKEIQNKLNMKIVT 210
            D+CGP++     +  YF  FIDD+++  WVY +  K + F I K F   ++ +  + I T
Sbjct: 533  DVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKT 592

Query: 209  LRTD*GAELISKGMEEFYKQKGIIRELTSPYNPQQNRVVERRNRTIVEMIHAMLN*SGLS 30
            +R+D G E  SK   ++ +  GI R+LT P +PQQN V ER+NRTI+EM  +ML    L 
Sbjct: 593  MRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLP 652

Query: 29   KSRWGYA 9
            K  W  A
Sbjct: 653  KELWAEA 659


>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
          Length = 1239

 Score =  139 bits (349), Expect = 6e-31
 Identities = 72/187 (38%), Positives = 106/187 (56%), Gaps = 3/187 (1%)
 Frame = -1

Query: 560 GHINSKYLRRIKKYSNLKELKFFDEK---CEYCCKEKSHKLPFPKTVSNKTSRPLQLIHS 390
           GHIN K ++ + K   ++ L   +E+   CE C   K  +  FP    +++S+ L+L+H+
Sbjct: 339 GHINFKTIKDMAKLEMVRGLPEINEEKKLCESCLVGKQTRNSFPSATPHRSSQVLELLHA 398

Query: 389 DLCGPMETMKRKRQRYFQCFIDDYTKMNWVYLMHSKDQFFGILKSFHKEIQNKLNMKIVT 210
           DLCGP+      + RY    IDD T+  W  L+  K + F   K+F   ++ ++N  IVT
Sbjct: 399 DLCGPISPSTLAQNRYIFVIIDDNTRYMWSILLKEKSEVFEKFKTFKALVEKEVNKVIVT 458

Query: 209 LRTD*GAELISKGMEEFYKQKGIIRELTSPYNPQQNRVVERRNRTIVEMIHAMLN*SGLS 30
           LRTD G E  S+  +++    GI R LT+PY PQQN VVERRNRT++EM  +ML    + 
Sbjct: 459 LRTDRGGEFTSRDFQDYCNNNGIRRHLTAPYTPQQNGVVERRNRTLMEMTRSMLKAMNVP 518

Query: 29  KSRWGYA 9
              WG A
Sbjct: 519 NYMWGEA 525


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  138 bits (348), Expect = 8e-31
 Identities = 75/190 (39%), Positives = 106/190 (55%), Gaps = 6/190 (3%)
 Frame = -1

Query: 560  GHINSKYLRRIKKYS------NLKELKFFDEKCEYCCKEKSHKLPFPKTVSNKTSRPLQL 399
            GH+N  +L+ + +        N+KEL    + CE C   K  +  FP   S + +  L+L
Sbjct: 450  GHLNVNWLKLLVQKDMVIGLPNIKEL----DLCEGCIYGKQTRKSFPVGKSWRATTCLEL 505

Query: 398  IHSDLCGPMETMKRKRQRYFQCFIDDYTKMNWVYLMHSKDQFFGILKSFHKEIQNKLNMK 219
            +H+DLCGPM+       RYF  F DDY++ +WVY +  K + F   K F   ++N+   K
Sbjct: 506  VHADLCGPMKMESLGGSRYFLMFTDDYSRFSWVYFLKFKSETFETFKKFKAFVENQSGNK 565

Query: 218  IVTLRTD*GAELISKGMEEFYKQKGIIRELTSPYNPQQNRVVERRNRTIVEMIHAMLN*S 39
            I +LRTD G E +S     F ++ GI RELT+PY P+QN V ER+NRT+VEM  + L   
Sbjct: 566  IKSLRTDRGGEFLSNDFNLFCEENGIRRELTAPYTPEQNGVAERKNRTVVEMARSSLKAK 625

Query: 38   GLSKSRWGYA 9
            GL    WG A
Sbjct: 626  GLPDYFWGEA 635


>ref|XP_002064813.1| GK15001 [Drosophila willistoni] gi|194160898|gb|EDW75799.1| GK15001
           [Drosophila willistoni]
          Length = 1249

 Score =  138 bits (347), Expect = 1e-30
 Identities = 71/188 (37%), Positives = 105/188 (55%), Gaps = 4/188 (2%)
 Frame = -1

Query: 560 GHINSKYLRRIKKYSNLKELKFFD----EKCEYCCKEKSHKLPFPKTVSNKTSRPLQLIH 393
           GH+N K L +I     ++ L   +      C+ C   K H  PFPK   +++S  LQL+H
Sbjct: 400 GHLNYKSLTQIASKGLVRGLSVTNFAPNTPCKTCMVSKIHVQPFPKMTESRSSELLQLVH 459

Query: 392 SDLCGPMETMKRKRQRYFQCFIDDYTKMNWVYLMHSKDQFFGILKSFHKEIQNKLNMKIV 213
           SD+CGP  T      RYF  FIDD ++  +VY +  KD+ FG    F   ++ +   K+ 
Sbjct: 460 SDVCGPFGTKSLGGSRYFLTFIDDKSRRIFVYFLKGKDEVFGKFLEFKSLVERQTGKKLK 519

Query: 212 TLRTD*GAELISKGMEEFYKQKGIIRELTSPYNPQQNRVVERRNRTIVEMIHAMLN*SGL 33
            +R+D G E ++   +++ K+ GI+R+LT  Y PQQN V ER NRT+VEM   +L  SGL
Sbjct: 520 CIRSDNGREYVNNAFDDYLKKNGILRQLTIAYTPQQNGVAERANRTLVEMSRCLLAQSGL 579

Query: 32  SKSRWGYA 9
            ++ W  A
Sbjct: 580 CEALWAEA 587


>gb|ACI62137.1| polyprotein [Drosophila melanogaster]
          Length = 1319

 Score =  137 bits (346), Expect = 1e-30
 Identities = 73/188 (38%), Positives = 105/188 (55%), Gaps = 4/188 (2%)
 Frame = -1

Query: 560 GHINSKYLRRIKKYSNLKELKF----FDEKCEYCCKEKSHKLPFPKTVSNKTSRPLQLIH 393
           GH+N + L+ IK+   +  + F     +  C+ C   K H LPFP+     T   L+L+H
Sbjct: 408 GHLNFQCLKEIKEKELVIGMDFKNMSVNINCDTCNMAKIHVLPFPQNSERATQSVLELVH 467

Query: 392 SDLCGPMETMKRKRQRYFQCFIDDYTKMNWVYLMHSKDQFFGILKSFHKEIQNKLNMKIV 213
           SD+CGPM        +YF  FIDDY++  ++Y MH+K++ F   K F   ++ +   KI 
Sbjct: 468 SDVCGPMNVSSLGGNKYFVTFIDDYSRKIFIYFMHAKNEVFDKFKLFKSYVECQTGKKIK 527

Query: 212 TLRTD*GAELISKGMEEFYKQKGIIRELTSPYNPQQNRVVERRNRTIVEMIHAMLN*SGL 33
            LR+D G E +++   E+    GI R+LT PY PQQN V ER NRTIVEM  +ML  + L
Sbjct: 528 ALRSDNGTEYVNRQFTEYLNTCGIKRQLTVPYTPQQNGVAERANRTIVEMAKSMLIHAKL 587

Query: 32  SKSRWGYA 9
            +  W  A
Sbjct: 588 EEFLWAEA 595