BLASTX nr result

ID: Ephedra28_contig00025653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00025653
         (435 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004238189.1| PREDICTED: probable disease resistance prote...    61   1e-07
ref|NP_001274865.1| uncharacterized protein LOC102584097 [Solanu...    60   3e-07
gb|AEL30361.1| NBS-LRR type disease resistance protein [Arachis ...    57   3e-06
gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac...    56   4e-06
ref|NP_851172.1| TIR-NBS-LRR class disease resistance protein [A...    56   6e-06
ref|NP_199976.2| TIR-NBS-LRR class disease resistance protein [A...    56   6e-06
dbj|BAB08679.1| disease resistance protein; strong similarity to...    56   6e-06
ref|NP_001190516.1| TIR-NBS-LRR class disease resistance protein...    56   6e-06
ref|XP_003551059.1| PREDICTED: probable disease resistance prote...    55   1e-05

>ref|XP_004238189.1| PREDICTED: probable disease resistance protein At4g33300-like
           [Solanum lycopersicum]
          Length = 829

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 31/166 (18%)
 Frame = -1

Query: 432 ELFNRFC--SFHAQSIPEGFLD-IVEEITAKCNGLPLALKIIGSSLKGKPFQMWIRMFNF 262
           E  + FC  +F   S P GF   +V+EI  +C GLPLALK+IGSSLKGKP  +W    N 
Sbjct: 339 EAMSLFCHFAFGHNSFPRGFSQKLVKEIVDECEGLPLALKVIGSSLKGKPEMLWTSAKNR 398

Query: 261 LTIFHTAMEQKALNIL---SLSYDYGEGWLVSCWMSEGS------------------LYR 145
           L+      E   L +L    LS D     +  C++  G+                  L+ 
Sbjct: 399 LSRCQPVCESHELQLLERMKLSIDCLPEKVRECFLDLGAFPEDKRIPLDVLINMWVELHD 458

Query: 144 QDE------LYQVGLKNMQEKLSLAEINEKYTDVYKLLVI-HRVVR 28
            DE      L ++  KN+   +  A   + YT  Y++ V  H V+R
Sbjct: 459 IDEEEAFHILVELSDKNLLNLVKDARAGDMYTSYYEISVFQHDVLR 504


>ref|NP_001274865.1| uncharacterized protein LOC102584097 [Solanum tuberosum]
           gi|323370547|gb|ADX43928.1| ADR1 [Solanum tuberosum]
          Length = 832

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 51/157 (32%), Positives = 71/157 (45%), Gaps = 29/157 (18%)
 Frame = -1

Query: 411 SFHAQSIPEGFLD-IVEEITAKCNGLPLALKIIGSSLKGKPFQMWIRMFNFLTIFHTAME 235
           +F   S P GF   +V+EI  +C GLPLALK+IGSSLKGKP   WI   N L+      E
Sbjct: 351 AFGHNSFPRGFSQKLVKEIVDECEGLPLALKVIGSSLKGKPEMFWISAKNRLSRCQPVCE 410

Query: 234 QKALNIL---SLSYDYGEGWLVSCWMSEGS------------------LYRQDE------ 136
              L +L    LS D     +  C++  G+                  L+  DE      
Sbjct: 411 SHELQLLERMKLSIDCLPVKVRECFLDLGAFPEDKRIPLDVLINMWVELHDIDEEEAFHI 470

Query: 135 LYQVGLKNMQEKLSLAEINEKYTDVYKLLVI-HRVVR 28
           L ++  KN+   +  A   + YT  Y++ V  H V+R
Sbjct: 471 LVELSDKNLLNLVKDARAGDMYTSYYEISVFQHDVLR 507


>gb|AEL30361.1| NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1119

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 10/88 (11%)
 Frame = -1

Query: 432 ELFNRFC--SFHAQSIP-EGFLDIVEEITAKCNGLPLALKIIGSSLKGKPFQMWIRMFNF 262
           E FN FC  +F   + P EGFLD+ EE+     GLPLALK++GS L G+P  +W      
Sbjct: 231 EAFNLFCLKAFKQAAEPTEGFLDLSEEVVKYSGGLPLALKVLGSYLNGRPIAVW------ 284

Query: 261 LTIFHTAMEQ-------KALNILSLSYD 199
               H+A+E+       + +++L +SYD
Sbjct: 285 ----HSAIEKIKKSSHSEIIDVLKISYD 308


>gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1939

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 9/87 (10%)
 Frame = -1

Query: 432 ELFNRFC--SFHAQSIPEGFLDIVEEITAKCNGLPLALKIIGSSLKGKPFQMWIRMFNFL 259
           E FN FC  +F      EGFLD+ +E+     GLPLALK++GS L G+P  +W       
Sbjct: 249 EAFNLFCLKAFKQPEPAEGFLDLFQEVIKYSGGLPLALKVLGSYLNGRPIAVW------- 301

Query: 258 TIFHTAMEQ-------KALNILSLSYD 199
              H+A+E+         +++L +SYD
Sbjct: 302 ---HSAIEKIKKSSHSDIIDVLKISYD 325


>ref|NP_851172.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
           gi|110737797|dbj|BAF00837.1| hypothetical protein
           [Arabidopsis thaliana] gi|332008724|gb|AED96107.1|
           TIR-NBS-LRR class disease resistance protein
           [Arabidopsis thaliana]
          Length = 1229

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 12/133 (9%)
 Frame = -1

Query: 411 SFHAQSIPEGFLDIVEEITAKCNGLPLALKIIGSSLKGKPFQMWIRMFNFLTIFHTAMEQ 232
           +F   S P+GF+ +  E+T     LPLAL I+GSSLKG+  + WI M   L   ++ ++ 
Sbjct: 353 AFDRNSPPDGFMQLANEVTELVGNLPLALNIMGSSLKGRDKEEWIEMMPSLR--NSLVDG 410

Query: 231 KALNILSLSYDYGEG----------WLVSCWMSEGSLYRQDELYQVGLKNMQEKLSLAEI 82
           + L  L +SYD   G           L++C   E  +    +   +GLK + EK SL  I
Sbjct: 411 EILKTLRVSYDRLHGNYQEIFLYIACLLNCCGVEYIISMLGDNAIIGLKILAEK-SLIHI 469

Query: 81  N--EKYTDVYKLL 49
           +  +K  +++ LL
Sbjct: 470 SPLDKTVEMHSLL 482


>ref|NP_199976.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
           gi|332008725|gb|AED96108.1| TIR-NBS-LRR class disease
           resistance protein [Arabidopsis thaliana]
          Length = 1175

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 12/133 (9%)
 Frame = -1

Query: 411 SFHAQSIPEGFLDIVEEITAKCNGLPLALKIIGSSLKGKPFQMWIRMFNFLTIFHTAMEQ 232
           +F   S P+GF+ +  E+T     LPLAL I+GSSLKG+  + WI M   L   ++ ++ 
Sbjct: 289 AFDRNSPPDGFMQLANEVTELVGNLPLALNIMGSSLKGRDKEEWIEMMPSLR--NSLVDG 346

Query: 231 KALNILSLSYDYGEG----------WLVSCWMSEGSLYRQDELYQVGLKNMQEKLSLAEI 82
           + L  L +SYD   G           L++C   E  +    +   +GLK + EK SL  I
Sbjct: 347 EILKTLRVSYDRLHGNYQEIFLYIACLLNCCGVEYIISMLGDNAIIGLKILAEK-SLIHI 405

Query: 81  N--EKYTDVYKLL 49
           +  +K  +++ LL
Sbjct: 406 SPLDKTVEMHSLL 418


>dbj|BAB08679.1| disease resistance protein; strong similarity to TMV resistance
           protein N [Arabidopsis thaliana]
          Length = 1239

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 12/133 (9%)
 Frame = -1

Query: 411 SFHAQSIPEGFLDIVEEITAKCNGLPLALKIIGSSLKGKPFQMWIRMFNFLTIFHTAMEQ 232
           +F   S P+GF+ +  E+T     LPLAL I+GSSLKG+  + WI M   L   ++ ++ 
Sbjct: 353 AFDRNSPPDGFMQLANEVTELVGNLPLALNIMGSSLKGRDKEEWIEMMPSLR--NSLVDG 410

Query: 231 KALNILSLSYDYGEG----------WLVSCWMSEGSLYRQDELYQVGLKNMQEKLSLAEI 82
           + L  L +SYD   G           L++C   E  +    +   +GLK + EK SL  I
Sbjct: 411 EILKTLRVSYDRLHGNYQEIFLYIACLLNCCGVEYIISMLGDNAIIGLKILAEK-SLIHI 469

Query: 81  N--EKYTDVYKLL 49
           +  +K  +++ LL
Sbjct: 470 SPLDKTVEMHSLL 482


>ref|NP_001190516.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
           gi|332008726|gb|AED96109.1| TIR-NBS-LRR class disease
           resistance protein [Arabidopsis thaliana]
          Length = 1181

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 12/133 (9%)
 Frame = -1

Query: 411 SFHAQSIPEGFLDIVEEITAKCNGLPLALKIIGSSLKGKPFQMWIRMFNFLTIFHTAMEQ 232
           +F   S P+GF+ +  E+T     LPLAL I+GSSLKG+  + WI M   L   ++ ++ 
Sbjct: 305 AFDRNSPPDGFMQLANEVTELVGNLPLALNIMGSSLKGRDKEEWIEMMPSLR--NSLVDG 362

Query: 231 KALNILSLSYDYGEG----------WLVSCWMSEGSLYRQDELYQVGLKNMQEKLSLAEI 82
           + L  L +SYD   G           L++C   E  +    +   +GLK + EK SL  I
Sbjct: 363 EILKTLRVSYDRLHGNYQEIFLYIACLLNCCGVEYIISMLGDNAIIGLKILAEK-SLIHI 421

Query: 81  N--EKYTDVYKLL 49
           +  +K  +++ LL
Sbjct: 422 SPLDKTVEMHSLL 434


>ref|XP_003551059.1| PREDICTED: probable disease resistance protein At5g66900-like
           [Glycine max]
          Length = 686

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/75 (30%), Positives = 44/75 (58%)
 Frame = -1

Query: 435 LELFNRFCSFHAQSIPEGFLDIVEEITAKCNGLPLALKIIGSSLKGKPFQMWIRMFNFLT 256
           + LF+ +      S+     D+V+++   C GLPLA+K+IG SL  +PF++W +M   L+
Sbjct: 175 MTLFHHYALLDCNSLNTPDEDVVQKVVKSCKGLPLAIKVIGRSLSHQPFELWQKMVEELS 234

Query: 255 IFHTAMEQKALNILS 211
             H+ ++  +  +L+
Sbjct: 235 HGHSILDSNSTELLT 249


Top