BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00025644
         (614 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006340302.1| PREDICTED: putative pentatricopeptide repeat...   158   1e-36
ref|XP_002515231.1| pentatricopeptide repeat-containing protein,...   157   3e-36
ref|XP_003591356.1| Pentatricopeptide repeat-containing protein ...   155   6e-36
ref|XP_004251431.1| PREDICTED: putative pentatricopeptide repeat...   155   8e-36
ref|XP_004495883.1| PREDICTED: putative pentatricopeptide repeat...   154   2e-35
ref|XP_006492377.1| PREDICTED: putative pentatricopeptide repeat...   152   5e-35
ref|XP_006444562.1| hypothetical protein CICLE_v10019795mg [Citr...   152   9e-35
ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat...   151   1e-34
gb|EXB55995.1| hypothetical protein L484_018781 [Morus notabilis]     151   2e-34
ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat...   150   2e-34
ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat...   150   2e-34
ref|XP_006303227.1| hypothetical protein CARUB_v10012086mg [Caps...   150   3e-34
gb|AAG00894.1|AC064879_12 Hypothetical protein [Arabidopsis thal...   150   3e-34
ref|NP_171744.1| pentatricopeptide repeat-containing protein [Ar...   150   3e-34
ref|XP_002310039.2| hypothetical protein POPTR_0007s06780g [Popu...   150   4e-34
ref|XP_006841601.1| hypothetical protein AMTR_s00003p00209480 [A...   150   4e-34
ref|XP_004295891.1| PREDICTED: putative pentatricopeptide repeat...   150   4e-34
ref|XP_006651155.1| PREDICTED: putative pentatricopeptide repeat...   149   5e-34
gb|EMJ24201.1| hypothetical protein PRUPE_ppa006785mg [Prunus pe...   149   5e-34
ref|XP_003558534.1| PREDICTED: putative pentatricopeptide repeat...   149   8e-34

>ref|XP_006340302.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Solanum tuberosum]
          Length = 505

 Score =  158 bits (399), Expect = 1e-36
 Identities = 80/203 (39%), Positives = 124/203 (61%), Gaps = 3/203 (1%)
 Frame = -3

Query: 612 KEAFHLAQDMRNKGQCPDTACYNMLMGALSRAGRLNDALEILEKMKKGDYCAPDVVTYNA 433
           ++AF + ++MR K   PD   Y  L+G L  AG+ + A  IL++M++   C PDV  YNA
Sbjct: 260 EKAFTVVEEMREKDITPDVITYTSLIGGLGLAGQPDKARHILKEMREYG-CYPDVAAYNA 318

Query: 432 LIWSFCVAGRFNEACTIMDEMKNSGIQPNPHTYNAFIRFYYLDSNWKDAWNVYVSMS--- 262
            I +FC+A R  +A ++MDEM  +G+ PN  TYN F+R ++  ++ K +W +Y  M    
Sbjct: 319 AIRNFCIAKRIGDAYSLMDEMVRNGLSPNATTYNVFLRSFFWINDLKSSWTLYQRMKETG 378

Query: 261 CHPVAESCKLLMKLLCFHGRLLKARQLWDEMIDHGYGCYPQVLDILIAALCDNGKLDDAE 82
           C P  +SC  L++L   H ++  A +LWD+M++ G+G Y  V D+L   LCD GKL +AE
Sbjct: 379 CLPSTQSCMFLIRLSRRHEKVEMALELWDDMMERGFGSYILVSDVLFDLLCDLGKLAEAE 438

Query: 81  SCFLDCLDKGHLPNAHSWDRQRI 13
            CFL  ++KG  P+  S+ R ++
Sbjct: 439 RCFLQMVNKGQKPSNVSFRRIKV 461


>ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545711|gb|EEF47215.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 505

 Score =  157 bits (396), Expect = 3e-36
 Identities = 76/203 (37%), Positives = 123/203 (60%), Gaps = 3/203 (1%)
 Frame = -3

Query: 612 KEAFHLAQDMRNKGQCPDTACYNMLMGALSRAGRLNDALEILEKMKKGDYCAPDVVTYNA 433
           ++A+ + + MR +   PD   Y  ++G L   G+ + A +IL +MK+   C PDV  YNA
Sbjct: 259 EKAYKVVEKMREEDISPDVITYTSIIGGLGLVGQPDKARDILNEMKEYG-CYPDVAAYNA 317

Query: 432 LIWSFCVAGRFNEACTIMDEMKNSGIQPNPHTYNAFIRFYYLDSNWKDAWNVYVSM---S 262
           +I ++C+A R  +A  +MDEM + G+ PN  TYN F R +Y  ++ +++W++Y  M    
Sbjct: 318 VIRNYCIAKRLGDASNLMDEMASKGLSPNATTYNLFFRVFYWSNDLRNSWSLYRRMMESG 377

Query: 261 CHPVAESCKLLMKLLCFHGRLLKARQLWDEMIDHGYGCYPQVLDILIAALCDNGKLDDAE 82
           C P  +SC  L++L   H ++  A  LW++M++ G+G Y  V D+L   LCD GKL +AE
Sbjct: 378 CLPNTQSCMFLIRLFRKHEKVEMALTLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 437

Query: 81  SCFLDCLDKGHLPNAHSWDRQRI 13
            CFL  ++KGH P+  S+ R ++
Sbjct: 438 KCFLQMIEKGHKPSNVSFRRIKV 460



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 5/184 (2%)
 Frame = -3

Query: 561 DTACYNMLMGALSRAGRLNDALEILEKMKKGDYCAPDVVTYNALIWSFCVAGRFNEACTI 382
           DT C+N L+  L +   + DA  +  ++KK     P++ T+N L+  +    +  EA   
Sbjct: 175 DTTCFNALLRTLCQEKSMTDARNVYHRLKK--EFKPNLQTFNILLSGW---KQSEEAELF 229

Query: 381 MDEMKNSGIQPNPHTYNAFIRFYYLDSNWKDAWNVYVSM---SCHPVAESCKLLMKLLCF 211
            +EM+  GI+P+  +YN+ I  Y  D   + A+ V   M      P   +   ++  L  
Sbjct: 230 FEEMRELGIKPDVVSYNSLIDVYCKDREMEKAYKVVEKMREEDISPDVITYTSIIGGLGL 289

Query: 210 HGRLLKARQLWDEMIDHGYGCYPQV--LDILIAALCDNGKLDDAESCFLDCLDKGHLPNA 37
            G+  KAR + +EM +  YGCYP V   + +I   C   +L DA +   +   KG  PNA
Sbjct: 290 VGQPDKARDILNEMKE--YGCYPDVAAYNAVIRNYCIAKRLGDASNLMDEMASKGLSPNA 347

Query: 36  HSWD 25
            +++
Sbjct: 348 TTYN 351


>ref|XP_003591356.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355480404|gb|AES61607.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 518

 Score =  155 bits (393), Expect = 6e-36
 Identities = 79/204 (38%), Positives = 122/204 (59%), Gaps = 4/204 (1%)
 Frame = -3

Query: 612 KEAFHLAQDMRNKGQCPDTACYNMLMGALSRAGRLNDALEILEKMKK-GDYCAPDVVTYN 436
           ++A+ +  +MR K   PD   Y  ++G L   G+ + A ++L++MK+ G Y  PDV  YN
Sbjct: 248 EKAYKVFDEMREKDLSPDVITYTSVIGGLGLVGQPDKARDVLKEMKEYGVY--PDVPAYN 305

Query: 435 ALIWSFCVAGRFNEACTIMDEMKNSGIQPNPHTYNAFIRFYYLDSNWKDAWNVYVSM--- 265
           A I ++C+A R   A  ++DEM N G+ PN  TYN F R +Y  ++ + +WN+Y  M   
Sbjct: 306 AAIRNYCIAKRLGIAFELVDEMVNKGLSPNATTYNLFFRVFYWSNDLQSSWNLYKRMMGE 365

Query: 264 SCHPVAESCKLLMKLLCFHGRLLKARQLWDEMIDHGYGCYPQVLDILIAALCDNGKLDDA 85
            C P  +SC  L++L   H ++  A QLW EM++ G+G Y  V D+L   LCD GKL +A
Sbjct: 366 GCLPYTQSCMFLIRLFKRHEKMEMALQLWGEMVEKGFGSYTLVSDVLFDMLCDMGKLMEA 425

Query: 84  ESCFLDCLDKGHLPNAHSWDRQRI 13
           E CFL+ ++KG  P+  S+ R ++
Sbjct: 426 EKCFLEMIEKGQRPSNVSFKRIKV 449


>ref|XP_004251431.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Solanum lycopersicum]
          Length = 500

 Score =  155 bits (392), Expect = 8e-36
 Identities = 77/203 (37%), Positives = 122/203 (60%), Gaps = 3/203 (1%)
 Frame = -3

Query: 612 KEAFHLAQDMRNKGQCPDTACYNMLMGALSRAGRLNDALEILEKMKKGDYCAPDVVTYNA 433
           ++AF + ++MR K   PD   Y  L+G L   G+ + A  IL++M++   C PD   YNA
Sbjct: 260 EKAFRVVEEMREKDITPDVITYTSLIGGLGLVGQPDKARHILKEMREYG-CYPDAAAYNA 318

Query: 432 LIWSFCVAGRFNEACTIMDEMKNSGIQPNPHTYNAFIRFYYLDSNWKDAWNVYVSMS--- 262
            + +FC+A R  +A ++MDEM  +G+ PN  TYN F+R ++  ++ K +W +Y  M    
Sbjct: 319 AVRNFCIAKRIGDAYSLMDEMVRNGLSPNATTYNVFLRSFFWINDLKSSWTLYQRMKETG 378

Query: 261 CHPVAESCKLLMKLLCFHGRLLKARQLWDEMIDHGYGCYPQVLDILIAALCDNGKLDDAE 82
           C P  +SC  L++L   H ++  A +LWD+M++ G+G Y  V D+L   LCD GKL +AE
Sbjct: 379 CLPSTQSCMFLIRLSRRHEKVEMALELWDDMMERGFGSYILVSDVLFDLLCDLGKLAEAE 438

Query: 81  SCFLDCLDKGHLPNAHSWDRQRI 13
            CFL  ++KG  P+  S+ R ++
Sbjct: 439 RCFLQMVNKGQKPSNVSFRRIKV 461


>ref|XP_004495883.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Cicer arietinum]
          Length = 502

 Score =  154 bits (389), Expect = 2e-35
 Identities = 79/203 (38%), Positives = 121/203 (59%), Gaps = 4/203 (1%)
 Frame = -3

Query: 609 EAFHLAQDMRNKGQCPDTACYNMLMGALSRAGRLNDALEILEKMKK-GDYCAPDVVTYNA 433
           +A+ +  +MR +   PD   Y  ++G L   G+ + A ++L++MK+ G Y  PDV  YNA
Sbjct: 255 KAYKVFDEMRERDLSPDVITYTCIIGGLGLIGQPDKARDVLKEMKEFGIY--PDVPAYNA 312

Query: 432 LIWSFCVAGRFNEACTIMDEMKNSGIQPNPHTYNAFIRFYYLDSNWKDAWNVYVSM---S 262
            I +FC+A R  +A  ++DEM N G+ PN  TYN F R YY  ++   +W++Y  M    
Sbjct: 313 AIRNFCIAKRLGDAYDLVDEMTNKGLSPNATTYNLFFRIYYWSNDLPSSWSLYKRMMVEG 372

Query: 261 CHPVAESCKLLMKLLCFHGRLLKARQLWDEMIDHGYGCYPQVLDILIAALCDNGKLDDAE 82
           C P  +SC  L++LL  H +   A QLW +M++ G+G Y  V D+L   LCD GKL +AE
Sbjct: 373 CLPNTQSCMFLIRLLKKHEKAEMALQLWGDMVEKGFGSYTLVSDVLFDLLCDMGKLLEAE 432

Query: 81  SCFLDCLDKGHLPNAHSWDRQRI 13
            CFL+ ++KG  P+  S+ R ++
Sbjct: 433 KCFLEMVEKGQKPSNVSFRRIKV 455


>ref|XP_006492377.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Citrus sinensis]
          Length = 506

 Score =  152 bits (385), Expect = 5e-35
 Identities = 75/203 (36%), Positives = 121/203 (59%), Gaps = 3/203 (1%)
 Frame = -3

Query: 612 KEAFHLAQDMRNKGQCPDTACYNMLMGALSRAGRLNDALEILEKMKKGDYCAPDVVTYNA 433
           ++A+ + + MR++   PD   Y  ++G L   G+ + A ++L++MK+   C PD   YNA
Sbjct: 261 EKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG-CYPDAAAYNA 319

Query: 432 LIWSFCVAGRFNEACTIMDEMKNSGIQPNPHTYNAFIRFYYLDSNWKDAWNVYVSM---S 262
            I ++C+A R  +A  +MDEM   G+ PN  TYN F R +Y  ++ + +WN+Y  M    
Sbjct: 320 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 379

Query: 261 CHPVAESCKLLMKLLCFHGRLLKARQLWDEMIDHGYGCYPQVLDILIAALCDNGKLDDAE 82
           C P  +SC  L+KL     ++  A QLW++M++ G+G Y  V D+L   LCD GKL +AE
Sbjct: 380 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 439

Query: 81  SCFLDCLDKGHLPNAHSWDRQRI 13
             FL+ ++KGH P+  S+ R ++
Sbjct: 440 KSFLEMIEKGHKPSQVSFRRIKV 462


>ref|XP_006444562.1| hypothetical protein CICLE_v10019795mg [Citrus clementina]
           gi|557546824|gb|ESR57802.1| hypothetical protein
           CICLE_v10019795mg [Citrus clementina]
          Length = 506

 Score =  152 bits (383), Expect = 9e-35
 Identities = 75/200 (37%), Positives = 119/200 (59%), Gaps = 3/200 (1%)
 Frame = -3

Query: 612 KEAFHLAQDMRNKGQCPDTACYNMLMGALSRAGRLNDALEILEKMKKGDYCAPDVVTYNA 433
           ++A+ + + MR++   PD   Y  ++G L   G+ + A ++L++MK+   C PD   YNA
Sbjct: 261 EKAYKIVEKMRDEDISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYG-CYPDAAAYNA 319

Query: 432 LIWSFCVAGRFNEACTIMDEMKNSGIQPNPHTYNAFIRFYYLDSNWKDAWNVYVSM---S 262
            I ++C+A R  +A  +MDEM   G+ PN  TYN F R +Y  ++ + +WN+Y  M    
Sbjct: 320 AIRNYCIAKRLRDASGLMDEMVEKGLSPNATTYNLFFRVFYWSNDLRSSWNLYCRMMGTG 379

Query: 261 CHPVAESCKLLMKLLCFHGRLLKARQLWDEMIDHGYGCYPQVLDILIAALCDNGKLDDAE 82
           C P  +SC  L+KL     ++  A QLW++M++ G+G Y  V D+L   LCD GKL +AE
Sbjct: 380 CLPNTQSCMFLVKLCKRQEKVEIALQLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAE 439

Query: 81  SCFLDCLDKGHLPNAHSWDR 22
             FL+ ++KGH P+  S+ R
Sbjct: 440 KSFLEMIEKGHKPSQVSFRR 459


>ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Glycine max]
          Length = 500

 Score =  151 bits (382), Expect = 1e-34
 Identities = 73/203 (35%), Positives = 120/203 (59%), Gaps = 3/203 (1%)
 Frame = -3

Query: 612 KEAFHLAQDMRNKGQCPDTACYNMLMGALSRAGRLNDALEILEKMKKGDYCAPDVVTYNA 433
           ++A+ +  +MR++   PD   Y  ++G L   G+ + A  +L++MK+   C PD   YNA
Sbjct: 254 EKAYKMLDEMRDQDFSPDVITYTCIIGGLGLIGQPDKARNVLKEMKEYG-CYPDAAAYNA 312

Query: 432 LIWSFCVAGRFNEACTIMDEMKNSGIQPNPHTYNAFIRFYYLDSNWKDAWNVYVSM---S 262
            I +FC+A R  +A  +++EM   G+ PN  TYN F R +Y  ++ + +WN+Y  M    
Sbjct: 313 AIRNFCIAKRLGDAHGLVEEMVTKGLSPNATTYNLFFRVFYWSNDLQSSWNMYQRMMVEG 372

Query: 261 CHPVAESCKLLMKLLCFHGRLLKARQLWDEMIDHGYGCYPQVLDILIAALCDNGKLDDAE 82
           C P  +SC  L++L   H ++  A Q W +M++ G+G Y  V D+L   LCD GKL++AE
Sbjct: 373 CLPNTQSCMFLIRLFRRHEKVEMALQFWGDMVEKGFGSYTLVSDVLFDLLCDMGKLEEAE 432

Query: 81  SCFLDCLDKGHLPNAHSWDRQRI 13
            CFL+ ++KG  P+  S+ R ++
Sbjct: 433 KCFLEMVEKGQKPSHVSFRRIKV 455



 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 49/210 (23%), Positives = 78/210 (37%), Gaps = 33/210 (15%)
 Frame = -3

Query: 561 DTACYNMLMGALSRAGRLNDALEILEKMK------------------------------K 472
           DT C+N L+  L +   + DA  +   +K                              K
Sbjct: 170 DTNCFNALLRTLCQEKSMADARNVYHSLKHRFRPNLQTFNILLSGWKTPEDADLFFKEMK 229

Query: 471 GDYCAPDVVTYNALIWSFCVAGRFNEACTIMDEMKNSGIQPNPHTYNAFIRFYYLDSNWK 292
                PDVVTYN+L+  +C      +A  ++DEM++    P+  TY   I    L     
Sbjct: 230 EMGVTPDVVTYNSLMDVYCKGREIEKAYKMLDEMRDQDFSPDVITYTCIIGGLGLIGQPD 289

Query: 291 DAWNVYVSM---SCHPVAESCKLLMKLLCFHGRLLKARQLWDEMIDHGYGCYPQVLDILI 121
            A NV   M    C+P A +    ++  C   RL  A  L +EM+  G        ++  
Sbjct: 290 KARNVLKEMKEYGCYPDAAAYNAAIRNFCIAKRLGDAHGLVEEMVTKGLSPNATTYNLFF 349

Query: 120 AALCDNGKLDDAESCFLDCLDKGHLPNAHS 31
                +  L  + + +   + +G LPN  S
Sbjct: 350 RVFYWSNDLQSSWNMYQRMMVEGCLPNTQS 379


>gb|EXB55995.1| hypothetical protein L484_018781 [Morus notabilis]
          Length = 486

 Score =  151 bits (381), Expect = 2e-34
 Identities = 77/203 (37%), Positives = 120/203 (59%), Gaps = 3/203 (1%)
 Frame = -3

Query: 612 KEAFHLAQDMRNKGQCPDTACYNMLMGALSRAGRLNDALEILEKMKKGDYCAPDVVTYNA 433
           ++AF +   MR++   PD   Y  ++G L   G+ + A ++L++MK+ D C PDV  YNA
Sbjct: 258 EKAFKVVAKMRDEDIQPDVITYTSIIGGLGLVGQPDKARDVLKEMKE-DGCYPDVAAYNA 316

Query: 432 LIWSFCVAGRFNEACTIMDEMKNSGIQPNPHTYNAFIRFYYLDSNWKDAWNVYVSM---S 262
            I +FC+A R   A ++MDEM + G+  N  TYN F R +Y  ++   +WN+Y  M    
Sbjct: 317 AIRNFCIAKRLGVAYSLMDEMVSKGLNANATTYNLFFRVFYWSNDLTSSWNLYGRMMETG 376

Query: 261 CHPVAESCKLLMKLLCFHGRLLKARQLWDEMIDHGYGCYPQVLDILIAALCDNGKLDDAE 82
           C P  +SC  L++L     ++  A QLW++M++ G+G Y  V D+L   LCD GKL +AE
Sbjct: 377 CLPNTQSCMFLIRLFRRQEKVEMALQLWNDMVEKGFGSYVLVSDVLFDLLCDAGKLMEAE 436

Query: 81  SCFLDCLDKGHLPNAHSWDRQRI 13
            CFL  ++KG  P+  S+ R ++
Sbjct: 437 RCFLQMVEKGQKPSNVSYRRIKV 459


>ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Cucumis sativus]
          Length = 495

 Score =  150 bits (380), Expect = 2e-34
 Identities = 80/202 (39%), Positives = 119/202 (58%), Gaps = 3/202 (1%)
 Frame = -3

Query: 609 EAFHLAQDMRNKGQCPDTACYNMLMGALSRAGRLNDALEILEKMKKGDYCAPDVVTYNAL 430
           +AF +   MR++    D   Y  ++G L   G+ + A  IL++MK+   C PDV  YNA 
Sbjct: 263 KAFKVVGKMRDEDIPADVITYTSIIGGLGLVGQPDKARNILKEMKEYG-CYPDVAAYNAT 321

Query: 429 IWSFCVAGRFNEACTIMDEMKNSGIQPNPHTYNAFIRFYYLDSNWKDAWNVYVSM---SC 259
           I +FC+A R +EA  ++DEM N G+ PN  TYN F R ++  ++ + AWN+Y  M    C
Sbjct: 322 IRNFCIAKRLHEAFDLLDEMVNKGLSPNATTYNLFFRIFFWSNDLQSAWNLYRRMMDTGC 381

Query: 258 HPVAESCKLLMKLLCFHGRLLKARQLWDEMIDHGYGCYPQVLDILIAALCDNGKLDDAES 79
            P  +SC  L++L   + +   A +LW++MI  G+G Y  V + L   LCD GKL +AES
Sbjct: 382 LPNTQSCLFLVRLFKKYEKEEMALELWNDMIQKGFGSYILVSEELFDLLCDLGKLIEAES 441

Query: 78  CFLDCLDKGHLPNAHSWDRQRI 13
           CFL  +DKGH P+  S+ R ++
Sbjct: 442 CFLQMVDKGHKPSYTSFKRIKV 463


>ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Cucumis sativus]
          Length = 495

 Score =  150 bits (380), Expect = 2e-34
 Identities = 80/202 (39%), Positives = 119/202 (58%), Gaps = 3/202 (1%)
 Frame = -3

Query: 609 EAFHLAQDMRNKGQCPDTACYNMLMGALSRAGRLNDALEILEKMKKGDYCAPDVVTYNAL 430
           +AF +   MR++    D   Y  ++G L   G+ + A  IL++MK+   C PDV  YNA 
Sbjct: 263 KAFKVVGKMRDEDIPADVITYTSIIGGLGLVGQPDKARNILKEMKEYG-CYPDVAAYNAT 321

Query: 429 IWSFCVAGRFNEACTIMDEMKNSGIQPNPHTYNAFIRFYYLDSNWKDAWNVYVSM---SC 259
           I +FC+A R +EA  ++DEM N G+ PN  TYN F R ++  ++ + AWN+Y  M    C
Sbjct: 322 IRNFCIAKRLHEAFDLLDEMVNKGLSPNATTYNLFFRIFFWSNDLQSAWNLYRRMMDTGC 381

Query: 258 HPVAESCKLLMKLLCFHGRLLKARQLWDEMIDHGYGCYPQVLDILIAALCDNGKLDDAES 79
            P  +SC  L++L   + +   A +LW++MI  G+G Y  V + L   LCD GKL +AES
Sbjct: 382 LPNTQSCLFLVRLFKKYEKEEMALELWNDMIQKGFGSYILVSEELFDLLCDLGKLIEAES 441

Query: 78  CFLDCLDKGHLPNAHSWDRQRI 13
           CFL  +DKGH P+  S+ R ++
Sbjct: 442 CFLQMVDKGHKPSYTSFKRIKV 463


>ref|XP_006303227.1| hypothetical protein CARUB_v10012086mg [Capsella rubella]
           gi|482571938|gb|EOA36125.1| hypothetical protein
           CARUB_v10012086mg [Capsella rubella]
          Length = 494

 Score =  150 bits (379), Expect = 3e-34
 Identities = 78/206 (37%), Positives = 123/206 (59%), Gaps = 3/206 (1%)
 Frame = -3

Query: 612 KEAFHLAQDMRNKGQCPDTACYNMLMGALSRAGRLNDALEILEKMKKGDYCAPDVVTYNA 433
           ++A+ L   MR + + PD   Y  ++G L   G+ + A E+L++MK+   C PDV  YNA
Sbjct: 266 EKAYKLIDKMREEDETPDVITYTTIIGGLGLIGQPDKAREVLKEMKEYG-CYPDVAAYNA 324

Query: 432 LIWSFCVAGRFNEACTIMDEMKNSGIQPNPHTYNAFIRFYYLDSNWKDAWNVYVSM---S 262
            I +FC+A R  +A  ++DEM  +G+ PN  TYN F R   L ++   +W +Y  M    
Sbjct: 325 AIRNFCIARRLGDADMLVDEMVRNGLSPNATTYNLFFRVLSLANDLGRSWELYERMLGNG 384

Query: 261 CHPVAESCKLLMKLLCFHGRLLKARQLWDEMIDHGYGCYPQVLDILIAALCDNGKLDDAE 82
           C P  +SC  L+K+   H ++  A QLW++M+  G+G Y  V D+L+  LCD  K+++AE
Sbjct: 385 CLPNTQSCMFLIKMFKRHEKVDMALQLWEDMVIKGFGSYSLVSDVLLDLLCDLAKVEEAE 444

Query: 81  SCFLDCLDKGHLPNAHSWDRQRIKLI 4
            C L+ ++KGH P+  S+  +RIKL+
Sbjct: 445 KCLLEMVEKGHRPSNVSF--KRIKLL 468



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 5/184 (2%)
 Frame = -3

Query: 561 DTACYNMLMGALSRAGRLNDALEILEKMKKGDYCAPDVVTYNALIWSFCVAGRFNEACTI 382
           DTAC+N L+  L +   + DA  +   +K  D   PD+ T+N L+  +  +    EA   
Sbjct: 182 DTACFNALLRTLCQEKSMTDARNVYHSLK--DQFQPDLQTFNILLSGWKSS---EEADAF 236

Query: 381 MDEMKNSGIQPNPHTYNAFIRFYYLDSNWKDAWNVYVSMSCH---PVAESCKLLMKLLCF 211
             EMK  G++P+  TYN+ I  Y  D   + A+ +   M      P   +   ++  L  
Sbjct: 237 FKEMKEKGLKPDVVTYNSLIDVYCKDREMEKAYKLIDKMREEDETPDVITYTTIIGGLGL 296

Query: 210 HGRLLKARQLWDEMIDHGYGCYPQV--LDILIAALCDNGKLDDAESCFLDCLDKGHLPNA 37
            G+  KAR++  EM +  YGCYP V   +  I   C   +L DA+    + +  G  PNA
Sbjct: 297 IGQPDKAREVLKEMKE--YGCYPDVAAYNAAIRNFCIARRLGDADMLVDEMVRNGLSPNA 354

Query: 36  HSWD 25
            +++
Sbjct: 355 TTYN 358


>gb|AAG00894.1|AC064879_12 Hypothetical protein [Arabidopsis thaliana]
          Length = 490

 Score =  150 bits (379), Expect = 3e-34
 Identities = 78/206 (37%), Positives = 123/206 (59%), Gaps = 3/206 (1%)
 Frame = -3

Query: 612 KEAFHLAQDMRNKGQCPDTACYNMLMGALSRAGRLNDALEILEKMKKGDYCAPDVVTYNA 433
           ++A+ L   MR + + PD   Y  ++G L   G+ + A E+L++MK+   C PDV  YNA
Sbjct: 262 EKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYG-CYPDVAAYNA 320

Query: 432 LIWSFCVAGRFNEACTIMDEMKNSGIQPNPHTYNAFIRFYYLDSNWKDAWNVYVSM---S 262
            I +FC+A R  +A  ++DEM   G+ PN  TYN F R   L ++   +W +YV M    
Sbjct: 321 AIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNE 380

Query: 261 CHPVAESCKLLMKLLCFHGRLLKARQLWDEMIDHGYGCYPQVLDILIAALCDNGKLDDAE 82
           C P  +SC  L+K+   H ++  A +LW++M+  G+G Y  V D+L+  LCD  K+++AE
Sbjct: 381 CLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAE 440

Query: 81  SCFLDCLDKGHLPNAHSWDRQRIKLI 4
            C L+ ++KGH P+  S+  +RIKL+
Sbjct: 441 KCLLEMVEKGHRPSNVSF--KRIKLL 464



 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 5/184 (2%)
 Frame = -3

Query: 561 DTACYNMLMGALSRAGRLNDALEILEKMKKGDYCAPDVVTYNALIWSFCVAGRFNEACTI 382
           DTAC+N L+  L +   + DA  +   +K      PD+ T+N L+  +  +    EA   
Sbjct: 178 DTACFNALLRTLCQEKSMTDARNVYHSLK--HQFQPDLQTFNILLSGWKSS---EEAEAF 232

Query: 381 MDEMKNSGIQPNPHTYNAFIRFYYLDSNWKDAWNVYVSMSCH---PVAESCKLLMKLLCF 211
            +EMK  G++P+  TYN+ I  Y  D   + A+ +   M      P   +   ++  L  
Sbjct: 233 FEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGL 292

Query: 210 HGRLLKARQLWDEMIDHGYGCYPQV--LDILIAALCDNGKLDDAESCFLDCLDKGHLPNA 37
            G+  KAR++  EM +  YGCYP V   +  I   C   +L DA+    + + KG  PNA
Sbjct: 293 IGQPDKAREVLKEMKE--YGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNA 350

Query: 36  HSWD 25
            +++
Sbjct: 351 TTYN 354


>ref|NP_171744.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806504|sp|Q9FZ19.2|PPR5_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At1g02420 gi|332189307|gb|AEE27428.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 491

 Score =  150 bits (379), Expect = 3e-34
 Identities = 78/206 (37%), Positives = 123/206 (59%), Gaps = 3/206 (1%)
 Frame = -3

Query: 612 KEAFHLAQDMRNKGQCPDTACYNMLMGALSRAGRLNDALEILEKMKKGDYCAPDVVTYNA 433
           ++A+ L   MR + + PD   Y  ++G L   G+ + A E+L++MK+   C PDV  YNA
Sbjct: 263 EKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYG-CYPDVAAYNA 321

Query: 432 LIWSFCVAGRFNEACTIMDEMKNSGIQPNPHTYNAFIRFYYLDSNWKDAWNVYVSM---S 262
            I +FC+A R  +A  ++DEM   G+ PN  TYN F R   L ++   +W +YV M    
Sbjct: 322 AIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNE 381

Query: 261 CHPVAESCKLLMKLLCFHGRLLKARQLWDEMIDHGYGCYPQVLDILIAALCDNGKLDDAE 82
           C P  +SC  L+K+   H ++  A +LW++M+  G+G Y  V D+L+  LCD  K+++AE
Sbjct: 382 CLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAE 441

Query: 81  SCFLDCLDKGHLPNAHSWDRQRIKLI 4
            C L+ ++KGH P+  S+  +RIKL+
Sbjct: 442 KCLLEMVEKGHRPSNVSF--KRIKLL 465



 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 5/184 (2%)
 Frame = -3

Query: 561 DTACYNMLMGALSRAGRLNDALEILEKMKKGDYCAPDVVTYNALIWSFCVAGRFNEACTI 382
           DTAC+N L+  L +   + DA  +   +K      PD+ T+N L+  +  +    EA   
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSLK--HQFQPDLQTFNILLSGWKSS---EEAEAF 233

Query: 381 MDEMKNSGIQPNPHTYNAFIRFYYLDSNWKDAWNVYVSMSCH---PVAESCKLLMKLLCF 211
            +EMK  G++P+  TYN+ I  Y  D   + A+ +   M      P   +   ++  L  
Sbjct: 234 FEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGL 293

Query: 210 HGRLLKARQLWDEMIDHGYGCYPQV--LDILIAALCDNGKLDDAESCFLDCLDKGHLPNA 37
            G+  KAR++  EM +  YGCYP V   +  I   C   +L DA+    + + KG  PNA
Sbjct: 294 IGQPDKAREVLKEMKE--YGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNA 351

Query: 36  HSWD 25
            +++
Sbjct: 352 TTYN 355


>ref|XP_002310039.2| hypothetical protein POPTR_0007s06780g [Populus trichocarpa]
           gi|550334290|gb|EEE90489.2| hypothetical protein
           POPTR_0007s06780g [Populus trichocarpa]
          Length = 509

 Score =  150 bits (378), Expect = 4e-34
 Identities = 74/203 (36%), Positives = 124/203 (61%), Gaps = 3/203 (1%)
 Frame = -3

Query: 612 KEAFHLAQDMRNKGQCPDTACYNMLMGALSRAGRLNDALEILEKMKKGDYCAPDVVTYNA 433
           ++A+ +   MR +   PD   Y  ++G L   G+ + A ++L++MK+   C PDV  YNA
Sbjct: 265 EKAYGVVARMREEDILPDVITYTSIIGGLGLVGQPDKARDMLKEMKEHG-CYPDVAAYNA 323

Query: 432 LIWSFCVAGRFNEACTIMDEMKNSGIQPNPHTYNAFIRFYYLDSNWKDAWNVYVSM---S 262
           +I ++C+A R + A ++M EM++ G+ PN  +YN F R +   ++ +++W+ Y  M    
Sbjct: 324 VIRNYCIAKRLDAAYSLMAEMESKGMSPNATSYNLFFRVFSWSNDLRNSWDFYGRMMDAG 383

Query: 261 CHPVAESCKLLMKLLCFHGRLLKARQLWDEMIDHGYGCYPQVLDILIAALCDNGKLDDAE 82
           C P  +SC  L+KL   H ++  A QLW++M++ G+G Y  V D+L+  LCD GKL +AE
Sbjct: 384 CLPNTQSCMFLIKLFKRHEKVEMALQLWNDMVEKGFGSYILVSDVLLGMLCDMGKLVEAE 443

Query: 81  SCFLDCLDKGHLPNAHSWDRQRI 13
            CFL  ++KGH P+  S+ R ++
Sbjct: 444 KCFLQMVEKGHKPSNVSFRRIKV 466


>ref|XP_006841601.1| hypothetical protein AMTR_s00003p00209480 [Amborella trichopoda]
           gi|548843622|gb|ERN03276.1| hypothetical protein
           AMTR_s00003p00209480 [Amborella trichopoda]
          Length = 436

 Score =  150 bits (378), Expect = 4e-34
 Identities = 77/202 (38%), Positives = 115/202 (56%), Gaps = 3/202 (1%)
 Frame = -3

Query: 609 EAFHLAQDMRNKGQCPDTACYNMLMGALSRAGRLNDALEILEKMKKGDYCAPDVVTYNAL 430
           +A  + Q MR K   PD   Y  ++G L   G+ + A E+L++M++   C PD   YNA 
Sbjct: 207 KALKIVQMMREKEIYPDVMTYTSIIGGLGLMGQPDKACEVLKEMREHG-CYPDTPAYNAA 265

Query: 429 IWSFCVAGRFNEACTIMDEMKNSGIQPNPHTYNAFIRFYYLDSNWKDAWNVYVSM---SC 259
           I +FC+A R  +A   MDEM   G+ PNP TYN F R +Y  ++   AW++Y  M    C
Sbjct: 266 IRNFCIARRLGDAYRSMDEMVMKGLSPNPTTYNLFFRCFYQSNDLSSAWSMYQRMMETGC 325

Query: 258 HPVAESCKLLMKLLCFHGRLLKARQLWDEMIDHGYGCYPQVLDILIAALCDNGKLDDAES 79
            P  ++C  L+KL     +L  + +LW++M++ G+G Y  V DIL   LCD GKL + E 
Sbjct: 326 LPNTQTCMFLIKLFKRQEKLEMSLRLWNDMVERGFGSYTLVSDILFDMLCDLGKLIEVEK 385

Query: 78  CFLDCLDKGHLPNAHSWDRQRI 13
           CFL  +DKG  P+  ++ R ++
Sbjct: 386 CFLQMIDKGQKPSNAAFKRIKV 407


>ref|XP_004295891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Fragaria vesca subsp. vesca]
          Length = 504

 Score =  150 bits (378), Expect = 4e-34
 Identities = 75/203 (36%), Positives = 125/203 (61%), Gaps = 3/203 (1%)
 Frame = -3

Query: 612 KEAFHLAQDMRNKGQCPDTACYNMLMGALSRAGRLNDALEILEKMKKGDYCAPDVVTYNA 433
           ++ F + + MR++   PD   Y  ++G     G+ + A ++L++MK+   C PDV  YNA
Sbjct: 259 EKVFKVMEKMRDEEIWPDKITYTCVIGGFGLVGQPDKARDVLKEMKELG-CYPDVAAYNA 317

Query: 432 LIWSFCVAGRFNEACTIMDEMKNSGIQPNPHTYNAFIRFYYLDSNWKDAWNVY---VSMS 262
            I +FC+A R  +A  +M+EM ++G+ PN  TYN F R ++  S+ +++W++Y   + M 
Sbjct: 318 AIRNFCIAKRLGDANGLMEEMMSNGLSPNATTYNLFFRVFFWSSDLQNSWSLYGRMMYMG 377

Query: 261 CHPVAESCKLLMKLLCFHGRLLKARQLWDEMIDHGYGCYPQVLDILIAALCDNGKLDDAE 82
           C P  +SC  L++L     ++  A QLW++MI+ G+G Y  V D+L   LCD GKL +AE
Sbjct: 378 CLPNTQSCMFLIRLFRKLEKVDLALQLWNDMIERGFGSYILVSDVLFDLLCDMGKLTEAE 437

Query: 81  SCFLDCLDKGHLPNAHSWDRQRI 13
           +CFL  ++KGH P+  S+ R ++
Sbjct: 438 TCFLQMVEKGHKPSNVSFRRIKV 460


>ref|XP_006651155.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Oryza brachyantha]
          Length = 468

 Score =  149 bits (377), Expect = 5e-34
 Identities = 77/203 (37%), Positives = 116/203 (57%), Gaps = 3/203 (1%)
 Frame = -3

Query: 612 KEAFHLAQDMRNKGQCPDTACYNMLMGALSRAGRLNDALEILEKMKKGDYCAPDVVTYNA 433
           ++A+ L  +MR K   PD   Y  L+G L   G+ + A  +L++M +   C PDV  YNA
Sbjct: 221 EQAYKLLDEMREKDISPDVITYTSLIGGLGLIGQPDKAKHLLKEMHELG-CYPDVAAYNA 279

Query: 432 LIWSFCVAGRFNEACTIMDEMKNSGIQPNPHTYNAFIRFYYLDSNWKDAWNVYVSM---S 262
            I +F +A R  EA  +MDEM + G+ PN  TYN F R YY   +   AW +Y  M    
Sbjct: 280 AIRNFVIAKRLGEAFALMDEMASKGLMPNATTYNLFFRCYYWAYDITSAWQLYERMRSEG 339

Query: 261 CHPVAESCKLLMKLLCFHGRLLKARQLWDEMIDHGYGCYPQVLDILIAALCDNGKLDDAE 82
           C P  +SC  +++L   HGR+ +A +LW +M+++G+G +  V D+L   LCD GKL++AE
Sbjct: 340 CFPNTQSCMFIVRLCHRHGRVAQALELWSDMVNNGFGSFTLVSDVLFDLLCDEGKLEEAE 399

Query: 81  SCFLDCLDKGHLPNAHSWDRQRI 13
            CF   +  G  P+  ++ R +I
Sbjct: 400 RCFHQMIALGQKPSYVAFRRIKI 422


>gb|EMJ24201.1| hypothetical protein PRUPE_ppa006785mg [Prunus persica]
          Length = 395

 Score =  149 bits (377), Expect = 5e-34
 Identities = 74/202 (36%), Positives = 120/202 (59%), Gaps = 3/202 (1%)
 Frame = -3

Query: 609 EAFHLAQDMRNKGQCPDTACYNMLMGALSRAGRLNDALEILEKMKKGDYCAPDVVTYNAL 430
           +A+ + + MR++   PD   Y  ++G L   G+ + A ++L++MK+   C PDV  YNA 
Sbjct: 150 KAYKVVEQMRDENISPDVFTYTSIIGGLGLVGQPDKARDVLKEMKEFG-CYPDVAAYNAA 208

Query: 429 IWSFCVAGRFNEACTIMDEMKNSGIQPNPHTYNAFIRFYYLDSNWKDAWNVYVSM---SC 259
           I +FC+A R  +A  +MD M + G+ PN  TYN F R ++  ++ + +W +Y  M    C
Sbjct: 209 IRNFCIAKRLGDAYGLMDAMMSKGLSPNATTYNLFFRVFFWSNDLQSSWGLYGRMMHTGC 268

Query: 258 HPVAESCKLLMKLLCFHGRLLKARQLWDEMIDHGYGCYPQVLDILIAALCDNGKLDDAES 79
            P  +SC  L++L     ++  A QLW++M++ G+G Y  V D+L   LCD GKL +AE 
Sbjct: 269 LPNTQSCMFLIRLFKRQEKVDMALQLWNDMVEKGFGSYILVSDVLFDLLCDLGKLMEAER 328

Query: 78  CFLDCLDKGHLPNAHSWDRQRI 13
           CFL  ++KGH P+  S+ R ++
Sbjct: 329 CFLQMMEKGHKPSNVSFRRIKV 350


>ref|XP_003558534.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Brachypodium distachyon]
          Length = 520

 Score =  149 bits (375), Expect = 8e-34
 Identities = 76/203 (37%), Positives = 119/203 (58%), Gaps = 3/203 (1%)
 Frame = -3

Query: 612 KEAFHLAQDMRNKGQCPDTACYNMLMGALSRAGRLNDALEILEKMKKGDYCAPDVVTYNA 433
           ++A+ L  +MR K   PD   Y  L+G L   G+ + A  +L++M +   C PDV  YNA
Sbjct: 265 EKAYKLLDEMREKEISPDVITYTSLIGGLGLIGQPDKARHLLKEMCELG-CHPDVPAYNA 323

Query: 432 LIWSFCVAGRFNEACTIMDEMKNSGIQPNPHTYNAFIRFYYLDSNWKDAWNVYVSMS--- 262
            I +F +A R  +A  +MDEM + G+ PN  TYN F RFYY   +   AW +Y  M    
Sbjct: 324 TIRNFVIAKRLGDAFALMDEMASKGLMPNATTYNLFFRFYYWAYDIGSAWLLYERMRSER 383

Query: 261 CHPVAESCKLLMKLLCFHGRLLKARQLWDEMIDHGYGCYPQVLDILIAALCDNGKLDDAE 82
           C P  +SC  +++L   HG++++A +LW +M+ +G+G +  V D+L   LCD GKL++AE
Sbjct: 384 CFPNTQSCMFIVRLCHRHGKVMQALELWSDMVGNGFGSFTLVSDVLFDLLCDEGKLEEAE 443

Query: 81  SCFLDCLDKGHLPNAHSWDRQRI 13
            CF   ++ G  P++ ++ R +I
Sbjct: 444 RCFHQMVELGQKPSSVAFRRIKI 466