BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00025623
         (432 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006481319.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g...    56   6e-06
ref|XP_006429723.1| hypothetical protein CICLE_v10011865mg [Citr...    56   6e-06
ref|XP_002887520.1| predicted protein [Arabidopsis lyrata subsp....    55   7e-06

>ref|XP_006481319.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g22660-like [Citrus
           sinensis]
          Length = 465

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 15/158 (9%)
 Frame = -3

Query: 430 RLSSLPDDVLALILSKTQSYKLAVKCSTISKRLGNLYTLLPS-LTFSFSETRNHSK---- 266
           RLS L D VL  +LS   + + A + S +S R   L+      L F  S T    K    
Sbjct: 35  RLSELSDHVLVNVLS-CLTIQEAARTSILSSRWRYLWKWFTGCLNFHNSLTTAAHKFELR 93

Query: 265 -DDLFEYEDIVSTALMRHHRDGLQS-------IALDVLSPDSLNTWLRFLSMSEVSKIHL 110
            D +F+ E     + +      LQS       I  DV S D ++ W++F    +V ++ L
Sbjct: 94  DDKVFDVERRKFVSWVNQVLRSLQSRTMEELRIRFDVTSDDDIHNWIKFAVEKKVGRLEL 153

Query: 109 NFNTWACDKWGNG-YEFPSEFLSWSVNC-LTEFSMSNL 2
           NF  +   +W  G Y FP  F+S+S  C LTE S+ N+
Sbjct: 154 NFRRFLAGRWEVGQYNFPPHFVSYSSFCSLTELSLINV 191


>ref|XP_006429723.1| hypothetical protein CICLE_v10011865mg [Citrus clementina]
           gi|557531780|gb|ESR42963.1| hypothetical protein
           CICLE_v10011865mg [Citrus clementina]
          Length = 410

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 15/158 (9%)
 Frame = -3

Query: 430 RLSSLPDDVLALILSKTQSYKLAVKCSTISKRLGNLYTLLPS-LTFSFSETRNHSK---- 266
           RLS L D VL  +LS   + + A + S +S R   L+      L F  S T    K    
Sbjct: 35  RLSELSDHVLVNVLS-CLTIQEAARTSILSSRWRYLWKWFTGCLNFHNSLTTAAHKFELR 93

Query: 265 -DDLFEYEDIVSTALMRHHRDGLQS-------IALDVLSPDSLNTWLRFLSMSEVSKIHL 110
            D +F+ E     + +      LQS       I  DV S D ++ W++F    +V ++ L
Sbjct: 94  DDKVFDVERRKFVSWVNQVLRSLQSRTMEELRIRFDVTSDDDIHNWIKFAVEKKVGRLEL 153

Query: 109 NFNTWACDKWGNG-YEFPSEFLSWSVNC-LTEFSMSNL 2
           NF  +   +W  G Y FP  F+S+S  C LTE S+ N+
Sbjct: 154 NFRRFLAGRWEVGQYNFPPHFVSYSSFCSLTELSLINV 191


>ref|XP_002887520.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333361|gb|EFH63779.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 447

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
 Frame = -3

Query: 427 LSSLPDDVLALILSKTQSYKLAVKCSTISKRLGNLYTLLPSLTFSFSETRNHSKDDLFEY 248
           +S LP DVL +I+S+  + + AV+ S +SKR  +L+  +  L     +   +S + L  +
Sbjct: 20  ISKLPSDVLLMIISRLSTEE-AVRTSLVSKRWEHLWKHMSHLVLDIRKKITNSNNTLHVW 78

Query: 247 EDIVS--TALMRHHRDGLQSIALDVLSPDSLNTWLRFLSMSEVSKIHLNFNTWACDKWGN 74
             + +  T ++ +HR  L+S  +   S   LNTW++ L++ + +K     +      +G 
Sbjct: 79  NRVATLMTKIINNHRGHLESCVIHHYSNGMLNTWIQSLTVVKQTKHLTLIHHVGLRNFGE 138

Query: 73  GYEFPSEFLSWSVNCLTEFSMSNL 2
             EFP    S+S   LT  S+S L
Sbjct: 139 FIEFPPN--SFSYPGLTSLSLSTL 160