BLASTX nr result
ID: Ephedra28_contig00025606
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra28_contig00025606 (429 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004154025.1| PREDICTED: uncharacterized protein LOC101211... 45 4e-06 gb|ABM55240.1| retrotransposon protein [Beta vulgaris] 42 4e-06 >ref|XP_004154025.1| PREDICTED: uncharacterized protein LOC101211634 [Cucumis sativus] Length = 207 Score = 44.7 bits (104), Expect(2) = 4e-06 Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Frame = -3 Query: 340 HRTYLIRSARITAQWIKHLSN*DIKEVLMSWSHHK--EQTWEGETSMKKTFPELFQN 176 H +Y+ + A I A+ +K L N I V + W +H+ E TWE E M+ +PELFQ+ Sbjct: 151 HLSYVEQPAEILAREVKMLRNRSIPLVKVLWRNHRIEEATWEREEEMRTRYPELFQD 207 Score = 31.6 bits (70), Expect(2) = 4e-06 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = -1 Query: 408 QLELPEQWKKVHPVFHISMLKSYIEPT 328 +L LP VH VFH+SML+ Y+ T Sbjct: 111 RLALPPSLSAVHNVFHVSMLRKYVADT 137 >gb|ABM55240.1| retrotransposon protein [Beta vulgaris] Length = 1501 Score = 42.4 bits (98), Expect(2) = 4e-06 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%) Frame = -3 Query: 334 TYLIRSARITAQWIKHLSN*DIKEVLMSWSHHK--EQTWEGETSMKKTFPELF 182 TY R +I + ++ N D+ V + WS+H+ E TWE E MKK +P+LF Sbjct: 1437 TYEERPVKILDRKVRSTRNKDVHIVKVLWSNHESEEATWEAEEDMKKKYPDLF 1489 Score = 33.5 bits (75), Expect(2) = 4e-06 Identities = 14/24 (58%), Positives = 19/24 (79%) Frame = -1 Query: 408 QLELPEQWKKVHPVFHISMLKSYI 337 +L LP +++K+H VFHIS LK YI Sbjct: 1395 RLALPMEFEKMHDVFHISQLKRYI 1418