BLASTX nr result

ID: Ephedra28_contig00025567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00025567
         (1050 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ91386.1| predicted protein [Hordeum vulgare subsp. vulgare]     60   2e-06
ref|XP_006656967.1| PREDICTED: uncharacterized protein LOC102700...    57   9e-06

>dbj|BAJ91386.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 408

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 7/147 (4%)
 Frame = -3

Query: 988 WKVHFSRYVPRPFALSSFEGNRVSRCNKRS-----GTWXXXXXXXXXXXXXXSNKDCK-- 830
           W+V F+RY   P   +S       RC   +     G+W              S+      
Sbjct: 30  WEVEFARYAAPPLRDTSTPPPPGVRCATSATDCHPGSWLPVATPAAVRVSRSSHPSAAPV 89

Query: 829 ISVNIHGKLYEEHLASRVKFTWTQERFYADCICLATPILFVSFCQKSAHNGCERGKFAMR 650
           ++V++ G ++EEH  S + F+W Q      C    + ++FVSF  KS     +  KFA+R
Sbjct: 90  LTVSVVGVVFEEHFVSILNFSWPQFTCGGQCPGSGSRVVFVSFVDKSK----QIQKFALR 145

Query: 649 FHSTHDVSAFLSQTQECMAGTYGVASS 569
           F    DV +FL+  +EC+  T  + SS
Sbjct: 146 FPQLSDVESFLNCVKECLGDTMDIKSS 172


>ref|XP_006656967.1| PREDICTED: uncharacterized protein LOC102700350, partial [Oryza
           brachyantha]
          Length = 399

 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 30/87 (34%), Positives = 45/87 (51%)
 Frame = -3

Query: 829 ISVNIHGKLYEEHLASRVKFTWTQERFYADCICLATPILFVSFCQKSAHNGCERGKFAMR 650
           ++V+I   ++EEH  S + F+W Q      C    + ++FVSFC KS     E  KFA+R
Sbjct: 73  LTVSIGNVVFEEHFVSILNFSWPQVTCVTQCPISGSRVVFVSFCDKSK----EIHKFALR 128

Query: 649 FHSTHDVSAFLSQTQECMAGTYGVASS 569
           F    D  +FL+  +EC   T  +  S
Sbjct: 129 FPQLSDAESFLNCVKECSTNTMDIIPS 155


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