BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00025384
         (378 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547002.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   105   8e-21
gb|ESW22392.1| hypothetical protein PHAVU_005G150000g [Phaseolus...   104   1e-20
ref|XP_002527133.1| ATP-dependent RNA helicase, putative [Ricinu...   104   1e-20
ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-depe...   103   2e-20
ref|XP_006595050.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   103   2e-20
ref|XP_003542053.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   103   2e-20
ref|XP_004487236.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   103   3e-20
ref|XP_002316148.2| hypothetical protein POPTR_0010s17940g [Popu...   100   3e-19
ref|XP_004310060.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    99   6e-19
gb|EMJ28270.1| hypothetical protein PRUPE_ppa000450mg [Prunus pe...    98   1e-18
ref|XP_004167772.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    97   3e-18
ref|XP_004148974.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    97   3e-18
gb|EXC06141.1| Pre-mRNA-splicing factor ATP-dependent RNA helica...    91   1e-16
gb|EOY13966.1| Pre-mRNA-splicing factor ATP-dependent RNA helica...    89   5e-16
ref|XP_003597474.1| Pre-mRNA-splicing factor ATP-dependent RNA h...    88   1e-15
gb|EEC82118.1| hypothetical protein OsI_26143 [Oryza sativa Indi...    88   1e-15
ref|NP_001059742.1| Os07g0508000 [Oryza sativa Japonica Group] g...    87   2e-15
gb|EEE67241.1| hypothetical protein OsJ_24387 [Oryza sativa Japo...    87   2e-15
ref|XP_006849874.1| hypothetical protein AMTR_s00022p00074370 [A...    87   2e-15
gb|EOY17381.1| Pre-mRNA-splicing factor ATP-dependent RNA helica...    86   4e-15

>ref|XP_003547002.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like isoform X1 [Glycine max]
          Length = 1272

 Score =  105 bits (261), Expect = 8e-21
 Identities = 53/95 (55%), Positives = 68/95 (71%)
 Frame = -1

Query: 378 SPMFVGSSPDSRLVSPWLGGDTPYISGSSYSPWDSVAPSPVPIRAGGASAKESTPRPRSR 199
           SPMFVG+SPD+RLVSPWLGG TP+ S +S SPWD V+PSPVPIRA G+SAK S  R   R
Sbjct: 248 SPMFVGASPDARLVSPWLGGHTPHSSFTSPSPWDHVSPSPVPIRASGSSAKSSVSRHNGR 307

Query: 198 SHQLNFRSQNSHSSQMDNMTEDKVSYGMDNNKAIS 94
           SHQL+F S+   S++ ++   DK   G ++   I+
Sbjct: 308 SHQLSFSSET--SNRYEDEMADKSDLGEEHKYDIT 340


>gb|ESW22392.1| hypothetical protein PHAVU_005G150000g [Phaseolus vulgaris]
          Length = 1272

 Score =  104 bits (259), Expect = 1e-20
 Identities = 54/96 (56%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
 Frame = -1

Query: 378 SPMFVGSSPDSRLVSPWLGGDTPYISGSSYSPWDSVAPSPVPIRAGGASAKEST-PRPRS 202
           SPMF+G+SPD+RLVSPWLGG+TP+ S +S SPWD V+PSP+PIRA G SAK S+  R   
Sbjct: 245 SPMFLGASPDARLVSPWLGGNTPHSSFNSSSPWDHVSPSPIPIRASGYSAKSSSVSRHSG 304

Query: 201 RSHQLNFRSQNSHSSQMDNMTEDKVSYGMDNNKAIS 94
           RSHQLNF S++S++ Q  +   DK   G D+   I+
Sbjct: 305 RSHQLNFSSESSNTFQ--DEVADKSDLGEDHKYEIT 338


>ref|XP_002527133.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223533556|gb|EEF35296.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1269

 Score =  104 bits (259), Expect = 1e-20
 Identities = 52/83 (62%), Positives = 61/83 (73%)
 Frame = -1

Query: 378 SPMFVGSSPDSRLVSPWLGGDTPYISGSSYSPWDSVAPSPVPIRAGGASAKESTPRPRSR 199
           SPMFVG+SPD+RLVSPWLGG TP  +GS+ SPWD +APSPVPIRA G+SAK S  R   R
Sbjct: 244 SPMFVGASPDARLVSPWLGGHTPSSTGSAASPWDHIAPSPVPIRASGSSAKSSGSRHGER 303

Query: 198 SHQLNFRSQNSHSSQMDNMTEDK 130
           SHQL F S +S    ++   EDK
Sbjct: 304 SHQLTFSSTSSR--PLEGEREDK 324


>ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like [Vitis vinifera]
          Length = 1289

 Score =  103 bits (258), Expect = 2e-20
 Identities = 48/83 (57%), Positives = 62/83 (74%)
 Frame = -1

Query: 378 SPMFVGSSPDSRLVSPWLGGDTPYISGSSYSPWDSVAPSPVPIRAGGASAKESTPRPRSR 199
           SPM VGSSPD+RLVSPW GG TP+ +GS+ SPWD+++PSPVPIRA GAS + S+ +   R
Sbjct: 267 SPMLVGSSPDARLVSPWFGGQTPHTTGSAASPWDTISPSPVPIRASGASVRSSSSKHSGR 326

Query: 198 SHQLNFRSQNSHSSQMDNMTEDK 130
           SHQLNF  +N  S   ++  +DK
Sbjct: 327 SHQLNFSVENLQS--FEDKEDDK 347


>ref|XP_006595050.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like isoform X2 [Glycine max]
           gi|571503064|ref|XP_006595051.1| PREDICTED:
           pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like isoform X3 [Glycine max]
          Length = 1271

 Score =  103 bits (257), Expect = 2e-20
 Identities = 51/95 (53%), Positives = 67/95 (70%)
 Frame = -1

Query: 378 SPMFVGSSPDSRLVSPWLGGDTPYISGSSYSPWDSVAPSPVPIRAGGASAKESTPRPRSR 199
           SPMFVG+SPD+RLVSPWLGG TP+ S +S SPWD V+PSPVPIRA G+S K S  +   R
Sbjct: 247 SPMFVGASPDARLVSPWLGGHTPHSSFTSSSPWDHVSPSPVPIRASGSSTKSSVSKHNGR 306

Query: 198 SHQLNFRSQNSHSSQMDNMTEDKVSYGMDNNKAIS 94
           SHQL+F S+   S++ ++   DK   G ++   I+
Sbjct: 307 SHQLSFSSET--SNRYEDEVADKSDLGEEHKYEIT 339


>ref|XP_003542053.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like isoform X1 [Glycine max]
          Length = 1270

 Score =  103 bits (257), Expect = 2e-20
 Identities = 51/95 (53%), Positives = 67/95 (70%)
 Frame = -1

Query: 378 SPMFVGSSPDSRLVSPWLGGDTPYISGSSYSPWDSVAPSPVPIRAGGASAKESTPRPRSR 199
           SPMFVG+SPD+RLVSPWLGG TP+ S +S SPWD V+PSPVPIRA G+S K S  +   R
Sbjct: 246 SPMFVGASPDARLVSPWLGGHTPHSSFTSSSPWDHVSPSPVPIRASGSSTKSSVSKHNGR 305

Query: 198 SHQLNFRSQNSHSSQMDNMTEDKVSYGMDNNKAIS 94
           SHQL+F S+   S++ ++   DK   G ++   I+
Sbjct: 306 SHQLSFSSET--SNRYEDEVADKSDLGEEHKYEIT 338


>ref|XP_004487236.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like [Cicer arietinum]
          Length = 1254

 Score =  103 bits (256), Expect = 3e-20
 Identities = 52/95 (54%), Positives = 66/95 (69%)
 Frame = -1

Query: 378 SPMFVGSSPDSRLVSPWLGGDTPYISGSSYSPWDSVAPSPVPIRAGGASAKESTPRPRSR 199
           SPMFVG+SPD+RLVSPWLGG TP+ S +S SPWD V+PSPVPIRA G+S K S      R
Sbjct: 246 SPMFVGASPDARLVSPWLGGHTPHSSFTSSSPWDHVSPSPVPIRASGSSVKSSVSGYNRR 305

Query: 198 SHQLNFRSQNSHSSQMDNMTEDKVSYGMDNNKAIS 94
           SH+L F S+NS+  + + +  DK   G +N   I+
Sbjct: 306 SHKLTFSSENSNKYEEEIL--DKSDLGEENKYEIT 338


>ref|XP_002316148.2| hypothetical protein POPTR_0010s17940g [Populus trichocarpa]
           gi|550330040|gb|EEF02319.2| hypothetical protein
           POPTR_0010s17940g [Populus trichocarpa]
          Length = 1284

 Score =  100 bits (248), Expect = 3e-19
 Identities = 49/95 (51%), Positives = 67/95 (70%)
 Frame = -1

Query: 378 SPMFVGSSPDSRLVSPWLGGDTPYISGSSYSPWDSVAPSPVPIRAGGASAKESTPRPRSR 199
           SPMFVG+SPD+RLVSPW+GG TP  SGS+ SPWD ++PSPVPIRA G+S + ST +   R
Sbjct: 259 SPMFVGASPDARLVSPWMGGQTPRSSGSAASPWDHISPSPVPIRASGSSFRSSTSKYGGR 318

Query: 198 SHQLNFRSQNSHSSQMDNMTEDKVSYGMDNNKAIS 94
           SHQL F + ++ S  +++   DK     ++N  I+
Sbjct: 319 SHQLTFSTTSAPS--LEDGEGDKTYSSEEHNHEIT 351


>ref|XP_004310060.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like [Fragaria vesca subsp. vesca]
          Length = 1307

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 47/75 (62%), Positives = 58/75 (77%)
 Frame = -1

Query: 378 SPMFVGSSPDSRLVSPWLGGDTPYISGSSYSPWDSVAPSPVPIRAGGASAKESTPRPRSR 199
           SPM +G+SPD+RLVSPWLGG TP  SGS  SPWD ++PSPVPIRA G S++ S+ +P +R
Sbjct: 282 SPMLLGASPDARLVSPWLGGTTPR-SGSGASPWDHISPSPVPIRASGYSSRSSSLKPGAR 340

Query: 198 SHQLNFRSQNSHSSQ 154
           SH L F S+NS S Q
Sbjct: 341 SHHLTFTSENSQSFQ 355


>gb|EMJ28270.1| hypothetical protein PRUPE_ppa000450mg [Prunus persica]
          Length = 1168

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 44/73 (60%), Positives = 57/73 (78%)
 Frame = -1

Query: 378 SPMFVGSSPDSRLVSPWLGGDTPYISGSSYSPWDSVAPSPVPIRAGGASAKESTPRPRSR 199
           SPM +G+SPD+RLVSPWLGG TP+ SGS+ SPWD ++PSP PIRA G S K S+ +  +R
Sbjct: 142 SPMLLGASPDARLVSPWLGGYTPHSSGSAASPWDHISPSPAPIRASGYSVKSSSSKHGAR 201

Query: 198 SHQLNFRSQNSHS 160
           SH+L F S++S S
Sbjct: 202 SHELTFSSESSQS 214


>ref|XP_004167772.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like, partial [Cucumis sativus]
          Length = 1178

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 44/84 (52%), Positives = 61/84 (72%), Gaps = 3/84 (3%)
 Frame = -1

Query: 378 SPMFVGSSPDSRLVSPWLGGDTPYISGSSYSPWDSVAPSPVPIRAGGASAKESTPRPRSR 199
           SPM+VG+SPD+RLVSPW GG+TP  +GSS SPWD ++PSPVP+RA G+S + S+    S+
Sbjct: 150 SPMYVGASPDARLVSPWFGGNTPNSTGSSASPWDQISPSPVPVRASGSSVRSSSTSYLSK 209

Query: 198 SHQLNFRSQNS---HSSQMDNMTE 136
           +H L F S++S     SQ D+  +
Sbjct: 210 THHLKFSSRSSPLAEDSQQDSQAD 233


>ref|XP_004148974.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like [Cucumis sativus]
          Length = 1298

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 44/84 (52%), Positives = 61/84 (72%), Gaps = 3/84 (3%)
 Frame = -1

Query: 378 SPMFVGSSPDSRLVSPWLGGDTPYISGSSYSPWDSVAPSPVPIRAGGASAKESTPRPRSR 199
           SPM+VG+SPD+RLVSPW GG+TP  +GSS SPWD ++PSPVP+RA G+S + S+    S+
Sbjct: 270 SPMYVGASPDARLVSPWFGGNTPNSTGSSASPWDQISPSPVPVRASGSSVRSSSTSYLSK 329

Query: 198 SHQLNFRSQNS---HSSQMDNMTE 136
           +H L F S++S     SQ D+  +
Sbjct: 330 THHLKFSSRSSPLAEDSQQDSQAD 353


>gb|EXC06141.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase [Morus
           notabilis]
          Length = 1302

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 45/79 (56%), Positives = 58/79 (73%)
 Frame = -1

Query: 378 SPMFVGSSPDSRLVSPWLGGDTPYISGSSYSPWDSVAPSPVPIRAGGASAKESTPRPRSR 199
           SPM VG+SPD+RLVSPWLGG TP+ SGS+ S WD V+PSPVPIRA G+S + S+ R   R
Sbjct: 277 SPMLVGASPDARLVSPWLGGHTPHSSGSNASAWDHVSPSPVPIRASGSSVRTSSSRHNGR 336

Query: 198 SHQLNFRSQNSHSSQMDNM 142
           S+Q  F ++ S S + + M
Sbjct: 337 SYQ-PFSAEASQSYEDEGM 354


>gb|EOY13966.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform 1
           [Theobroma cacao] gi|508722070|gb|EOY13967.1|
           Pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16 isoform 1 [Theobroma cacao]
          Length = 1279

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 48/97 (49%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
 Frame = -1

Query: 378 SPMFVGSSPDSRLVSPWLGGDTPYISGSSY--SPWDSVAPSPVPIRAGGASAKESTPRPR 205
           SPMFVG+SPD+RLVSPW+G  TP  +G+S   SPWD  +PSPVPIRA GAS K S+ R  
Sbjct: 253 SPMFVGASPDARLVSPWMGDRTPRSAGTSSGASPWDYASPSPVPIRASGASIKSSSSRYG 312

Query: 204 SRSHQLNFRSQNSHSSQMDNMTEDKVSYGMDNNKAIS 94
             SHQ++F  ++S S + +    DK     + N  I+
Sbjct: 313 RTSHQVSFSRESSQSFEDEG---DKTGPAEEQNYEIT 346


>ref|XP_003597474.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Medicago
           truncatula] gi|355486522|gb|AES67725.1|
           Pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16 [Medicago truncatula]
          Length = 1269

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 48/95 (50%), Positives = 62/95 (65%)
 Frame = -1

Query: 378 SPMFVGSSPDSRLVSPWLGGDTPYISGSSYSPWDSVAPSPVPIRAGGASAKESTPRPRSR 199
           SPMFVG+SPD+RLVSPW    TP+ S +S SPWD V+PSPVPIRA G+S K S      R
Sbjct: 247 SPMFVGASPDARLVSPW---HTPHSSYNSPSPWDHVSPSPVPIRASGSSVKSSVSGYNRR 303

Query: 198 SHQLNFRSQNSHSSQMDNMTEDKVSYGMDNNKAIS 94
           SH+L F S+NS + + +    DK   G ++   I+
Sbjct: 304 SHKLAFSSENSDTYEEE--IADKSDLGEEHKYEIT 336


>gb|EEC82118.1| hypothetical protein OsI_26143 [Oryza sativa Indica Group]
          Length = 1287

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 47/95 (49%), Positives = 58/95 (61%)
 Frame = -1

Query: 378 SPMFVGSSPDSRLVSPWLGGDTPYISGSSYSPWDSVAPSPVPIRAGGASAKESTPRPRSR 199
           SPM   +SPD+RLVSPWLGG+TP  + S   PWD+V+PSP PIRA G+S   S PR   R
Sbjct: 268 SPMLAAASPDARLVSPWLGGNTPRYAAS---PWDNVSPSPAPIRASGSSKGSSYPRSGGR 324

Query: 198 SHQLNFRSQNSHSSQMDNMTEDKVSYGMDNNKAIS 94
           SHQL F    S +S  ++   D+     D N  IS
Sbjct: 325 SHQLTF----SSTSASNDRESDRSPSAADGNYEIS 355


>ref|NP_001059742.1| Os07g0508000 [Oryza sativa Japonica Group]
           gi|33146483|dbj|BAC79592.1| putative DEAH-box RNA
           helicase [Oryza sativa Japonica Group]
           gi|113611278|dbj|BAF21656.1| Os07g0508000 [Oryza sativa
           Japonica Group]
          Length = 1280

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 47/95 (49%), Positives = 58/95 (61%)
 Frame = -1

Query: 378 SPMFVGSSPDSRLVSPWLGGDTPYISGSSYSPWDSVAPSPVPIRAGGASAKESTPRPRSR 199
           SPM   +SPD+RLVSPWLGG+TP  + S   PWD+V+PSP PIRA G+S   S PR   R
Sbjct: 261 SPMLAAASPDARLVSPWLGGNTPRYAAS---PWDNVSPSPAPIRASGSSKGSSYPRSGGR 317

Query: 198 SHQLNFRSQNSHSSQMDNMTEDKVSYGMDNNKAIS 94
           SHQL F    S +S  ++   D+     D N  IS
Sbjct: 318 SHQLTF----SSTSASNDRESDRSPSDADGNYEIS 348


>gb|EEE67241.1| hypothetical protein OsJ_24387 [Oryza sativa Japonica Group]
          Length = 1370

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 47/95 (49%), Positives = 58/95 (61%)
 Frame = -1

Query: 378 SPMFVGSSPDSRLVSPWLGGDTPYISGSSYSPWDSVAPSPVPIRAGGASAKESTPRPRSR 199
           SPM   +SPD+RLVSPWLGG+TP  + S   PWD+V+PSP PIRA G+S   S PR   R
Sbjct: 268 SPMLAAASPDARLVSPWLGGNTPRYAAS---PWDNVSPSPAPIRASGSSKGSSYPRSGGR 324

Query: 198 SHQLNFRSQNSHSSQMDNMTEDKVSYGMDNNKAIS 94
           SHQL F    S +S  ++   D+     D N  IS
Sbjct: 325 SHQLTF----SSTSASNDRESDRSPSDADGNYEIS 355


>ref|XP_006849874.1| hypothetical protein AMTR_s00022p00074370 [Amborella trichopoda]
           gi|548853472|gb|ERN11455.1| hypothetical protein
           AMTR_s00022p00074370 [Amborella trichopoda]
          Length = 1340

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 44/71 (61%), Positives = 51/71 (71%)
 Frame = -1

Query: 378 SPMFVGSSPDSRLVSPWLGGDTPYISGSSYSPWDSVAPSPVPIRAGGASAKESTPRPRSR 199
           SPM  G+SPD+RLVSPWLGG TPY S S+ SPWDSV PSP PI A G   + S  R + R
Sbjct: 312 SPMLAGASPDARLVSPWLGGHTPYTSVSA-SPWDSVTPSPAPIHASGVPTRSSMSRGQ-R 369

Query: 198 SHQLNFRSQNS 166
           SHQL+F S+ S
Sbjct: 370 SHQLSFPSEKS 380


>gb|EOY17381.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform 1
           [Theobroma cacao]
          Length = 1168

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 47/97 (48%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
 Frame = -1

Query: 378 SPMFVGSSPDSRLVSPWLGGDTPYISG--SSYSPWDSVAPSPVPIRAGGASAKESTPRPR 205
           S MFVG+SPD+RLVSPW+G  TP  +G  S  SPWD  +PSPVPIRA GAS K S+ R  
Sbjct: 14  SSMFVGASPDARLVSPWMGDRTPRSAGTASGASPWDYASPSPVPIRASGASIKSSSSRYG 73

Query: 204 SRSHQLNFRSQNSHSSQMDNMTEDKVSYGMDNNKAIS 94
             SHQ +F  ++S S + +    DK     ++N  I+
Sbjct: 74  RTSHQASFSRESSESFEDEG---DKTGLAEEHNYEIT 107