BLASTX nr result

ID: Ephedra28_contig00025331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00025331
         (514 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_640552.1| guanylate-binding protein [Dictyostelium discoi...    57   3e-06

>ref|XP_640552.1| guanylate-binding protein [Dictyostelium discoideum AX4]
           gi|60468578|gb|EAL66581.1| guanylate-binding protein
           [Dictyostelium discoideum AX4]
          Length = 796

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 12/180 (6%)
 Frame = -2

Query: 507 LSKHAQIFNLENWLHTADLEDGGSLSVDMDTSLLLKTLDFPPLTWVVQGFDLDLQASEKP 328
           LS+  Q+F L++ + + ++        + +   L   L+FP LTWVVQ F  D+   E P
Sbjct: 178 LSRRTQLFALKSQIKSNEM--------NQEILGLNNILNFPSLTWVVQDFFQDI-GDETP 228

Query: 327 IDFLRRYITAQAQTGDYTLD------TLFSHGISCYTLRTPA-DLNDLREKYGGKGLAAE 169
             +L   + A ++  D  +D      T     I C+TL  P+ D N LR     K     
Sbjct: 229 TQWLNNLLKAHSR--DKGVDSSLISITDIFPSIECHTLFLPSGDRNILRHLNKAKS---- 282

Query: 168 KDLFNNLHPKYRKDVESLRLAVFGNLTAKGSG----NLTAKKVASLLPLLVHYVNEN-FP 4
               N+L+P Y K++  L+  +F N    G G     LT   +++LL LL+   N N FP
Sbjct: 283 ----NDLNPIYIKELNELKSTLFKNDNDNGGGGGKSKLTGPSISTLLRLLIEVANGNKFP 338


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