BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00025312
         (434 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001744043.1| hypothetical protein [Monosiga brevicollis M...    75   9e-12
ref|XP_827237.1| polyadenylate-binding protein 1 [Trypanosoma br...    68   1e-09
ref|XP_002172476.1| polyadenylate-binding protein [Schizosacchar...    67   2e-09
ref|XP_002961040.1| hypothetical protein SELMODRAFT_74731 [Selag...    66   6e-09
ref|XP_002966972.1| hypothetical protein SELMODRAFT_168822 [Sela...    66   6e-09
ref|XP_002175535.1| polyadenylate-binding protein [Schizosacchar...    66   6e-09
ref|NP_188259.1| poly(A) binding protein 6 [Arabidopsis thaliana...    65   7e-09
emb|CCC92940.1| putative polyadenylate-binding protein 1 [Trypan...    65   9e-09
emb|CDK24264.1| unnamed protein product [Kuraishia capsulata CBS...    65   1e-08
ref|XP_006482368.1| PREDICTED: polyadenylate-binding protein 7-l...    64   2e-08
ref|XP_006430351.1| hypothetical protein CICLE_v10011287mg [Citr...    64   2e-08
ref|XP_006409548.1| hypothetical protein EUTSA_v10022589mg [Eutr...    64   2e-08
gb|EPY50998.1| mRNA export shuttling protein [Schizosaccharomyce...    64   2e-08
ref|XP_004978120.1| PREDICTED: polyadenylate-binding protein 2-l...    64   2e-08
ref|XP_002645756.1| C. briggsae CBR-PAB-2 protein [Caenorhabditi...    64   2e-08
emb|CCH46236.1| Polyadenylate-binding protein, cytoplasmic and n...    64   2e-08
ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula...    64   2e-08
emb|CCC50573.1| putative polyadenylate-binding protein 1 [Trypan...    64   2e-08
gb|ESW98469.1| Polyadenylate-binding protein, cytoplasmic and nu...    64   2e-08
ref|XP_002673420.1| polyadenylate binding protein [Naegleria gru...    64   2e-08

>ref|XP_001744043.1| hypothetical protein [Monosiga brevicollis MX1]
           gi|163778005|gb|EDQ91621.1| predicted protein [Monosiga
           brevicollis MX1]
          Length = 563

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 38/96 (39%), Positives = 61/96 (63%)
 Frame = -1

Query: 425 VHNFILQEHERKHSGNNCFRRNLKRSVRKYC*SLKFGSYGTMTSLKVMCDENGISRGFGC 246
           +H+ I QE + K+  +N + ++L   V +     KF  +GT+TSLK+M D NG SRGFG 
Sbjct: 276 IHDKIRQERDEKNKNSNLYIKHLPEDVTEDALRDKFSKFGTITSLKIMTDNNGDSRGFGF 335

Query: 245 ICFSNLEATSAAMRELLAGHMLEGKLLYVNIAANKI 138
           + F + +  +AA++E + G M++GK LYV +A  K+
Sbjct: 336 VNFDSADEAAAAIQE-MHGSMIDGKPLYVALALRKV 370


>ref|XP_827237.1| polyadenylate-binding protein 1 [Trypanosoma brucei brucei strain
           927/4 GUTat10.1] gi|70831402|gb|EAN76907.1|
           polyadenylate-binding protein 1, putative [Trypanosoma
           brucei brucei strain 927/4 GUTat10.1]
           gi|261331451|emb|CBH14445.1| PABP1 [Trypanosoma brucei
           gambiense DAL972]
          Length = 566

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 44/122 (36%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
 Frame = -1

Query: 383 GNNCFRRNLKRSVRKYC*SLKFGSYGTMTSLKVMCDENGISRGFGCICFSNLEATSAAMR 204
           GNN + RN      +   +  F  YG + S +VM D NGISRGFG + F N +  +AA+R
Sbjct: 302 GNNLYVRNFDAEFTEKDLNELFKEYGVIRSCRVMTDANGISRGFGFVSFENADQANAALR 361

Query: 203 ELLAGHMLEGKLLYVNIAANKICTCTFYKWRI-YCTQGIMHLIIFSTFIEPGNVVSKNDC 27
           E + G ML GK L VNIA  +    T  K ++    Q +MH +    F  PG+ + + + 
Sbjct: 362 E-MNGRMLNGKPLVVNIAQRRDQRLTMLKLQLQQRLQMMMHHMHPPPFGMPGHPLQRRNA 420

Query: 26  KT 21
           ++
Sbjct: 421 RS 422


>ref|XP_002172476.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
           yFS275] gi|212000523|gb|EEB06183.1|
           polyadenylate-binding protein [Schizosaccharomyces
           japonicus yFS275]
          Length = 662

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 38/88 (43%), Positives = 52/88 (59%)
 Frame = -1

Query: 404 EHERKHSGNNCFRRNLKRSVRKYC*SLKFGSYGTMTSLKVMCDENGISRGFGCICFSNLE 225
           E   K+ G N F +NL   V       +F ++GT+TS KVM DENG S+GFG +C+S+ E
Sbjct: 355 EKMSKYQGVNLFIKNLSDEVDDNLLKTEFSAFGTITSAKVMTDENGKSKGFGFVCYSSPE 414

Query: 224 ATSAAMRELLAGHMLEGKLLYVNIAANK 141
             + A+ E +   ML GK LYV +A  K
Sbjct: 415 EATKAIAE-MNQRMLAGKPLYVALAQRK 441


>ref|XP_002961040.1| hypothetical protein SELMODRAFT_74731 [Selaginella moellendorffii]
           gi|300171979|gb|EFJ38579.1| hypothetical protein
           SELMODRAFT_74731 [Selaginella moellendorffii]
          Length = 625

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 37/88 (42%), Positives = 51/88 (57%)
 Frame = -1

Query: 404 EHERKHSGNNCFRRNLKRSVRKYC*SLKFGSYGTMTSLKVMCDENGISRGFGCICFSNLE 225
           E  +K+ G N + +NL  S+       +F  YG +TS KVM DE GIS+GFG +CF++ E
Sbjct: 310 EQFQKYQGANLYVKNLDDSIDDETLKQEFSRYGNITSAKVMRDEKGISKGFGFVCFTSPE 369

Query: 224 ATSAAMRELLAGHMLEGKLLYVNIAANK 141
             S A  E   G M+ GK +YV +A  K
Sbjct: 370 EASRAATE-TNGLMINGKPIYVAMAQRK 396


>ref|XP_002966972.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
           gi|300164963|gb|EFJ31571.1| hypothetical protein
           SELMODRAFT_168822 [Selaginella moellendorffii]
          Length = 654

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 37/88 (42%), Positives = 51/88 (57%)
 Frame = -1

Query: 404 EHERKHSGNNCFRRNLKRSVRKYC*SLKFGSYGTMTSLKVMCDENGISRGFGCICFSNLE 225
           E  +K+ G N + +NL  S+       +F  YG +TS KVM DE GIS+GFG +CF++ E
Sbjct: 311 EQFQKYQGANLYVKNLDDSIDDETLKQEFSRYGNITSAKVMRDEKGISKGFGFVCFTSPE 370

Query: 224 ATSAAMRELLAGHMLEGKLLYVNIAANK 141
             S A  E   G M+ GK +YV +A  K
Sbjct: 371 EASRAATE-TNGLMINGKPIYVAMAQRK 397


>ref|XP_002175535.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
           yFS275] gi|212003582|gb|EEB09242.1| mRNA export
           shuttling protein [Schizosaccharomyces japonicus yFS275]
          Length = 621

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 37/88 (42%), Positives = 52/88 (59%)
 Frame = -1

Query: 404 EHERKHSGNNCFRRNLKRSVRKYC*SLKFGSYGTMTSLKVMCDENGISRGFGCICFSNLE 225
           E   K+ G N F +NL+  +       +F ++GT+TS KVM DEN  S+GFG +C+SN E
Sbjct: 345 EKINKYQGVNLFVKNLQDEIDDERLKSEFSAFGTITSAKVMTDENNKSKGFGFVCYSNPE 404

Query: 224 ATSAAMRELLAGHMLEGKLLYVNIAANK 141
             + A+ E +   ML GK LYV +A  K
Sbjct: 405 EATKAIAE-MNQRMLAGKPLYVALAQRK 431


>ref|NP_188259.1| poly(A) binding protein 6 [Arabidopsis thaliana]
           gi|75317805|sp|O04319.1|PABP6_ARATH RecName:
           Full=Polyadenylate-binding protein 6; Short=PABP-6;
           Short=Poly(A)-binding protein 6
           gi|2062166|gb|AAB63640.1| poly(A)-binding protein isolog
           [Arabidopsis thaliana] gi|9279720|dbj|BAB01277.1|
           poly(A) binding protein-like [Arabidopsis thaliana]
           gi|332642284|gb|AEE75805.1| poly(A) binding protein 6
           [Arabidopsis thaliana]
          Length = 537

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 38/93 (40%), Positives = 54/93 (58%)
 Frame = -1

Query: 419 NFILQEHERKHSGNNCFRRNLKRSVRKYC*SLKFGSYGTMTSLKVMCDENGISRGFGCIC 240
           NFI + + R    +N + +NL  S+ +      FG YG + S KVMC ENG S+GFG +C
Sbjct: 294 NFIAKPNMR---WSNLYVKNLSESMNETRLREIFGCYGQIVSAKVMCHENGRSKGFGFVC 350

Query: 239 FSNLEATSAAMRELLAGHMLEGKLLYVNIAANK 141
           FSN E +  A R  L G +++GK + V +A  K
Sbjct: 351 FSNCEESKQAKR-YLNGFLVDGKPIVVRVAERK 382


>emb|CCC92940.1| putative polyadenylate-binding protein 1 [Trypanosoma congolense
           IL3000]
          Length = 552

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 35/81 (43%), Positives = 48/81 (59%)
 Frame = -1

Query: 383 GNNCFRRNLKRSVRKYC*SLKFGSYGTMTSLKVMCDENGISRGFGCICFSNLEATSAAMR 204
           GNN + RN      +   +  F  YG + S +VM D NG+SRGFG + F N +  +AA+R
Sbjct: 302 GNNLYVRNFDPEFTEKDLNELFKEYGVIRSCRVMTDANGVSRGFGFVSFENADQANAALR 361

Query: 203 ELLAGHMLEGKLLYVNIAANK 141
           E ++G ML GK L VNIA  +
Sbjct: 362 E-MSGRMLNGKPLVVNIAQRR 381


>emb|CDK24264.1| unnamed protein product [Kuraishia capsulata CBS 1993]
          Length = 628

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 37/89 (41%), Positives = 52/89 (58%)
 Frame = -1

Query: 407 QEHERKHSGNNCFRRNLKRSVRKYC*SLKFGSYGTMTSLKVMCDENGISRGFGCICFSNL 228
           QE   K+ G N F +NL+ ++       +F  +GT+TS KVM D NG S+GFG +CFS  
Sbjct: 323 QEKLNKYQGVNLFVKNLEDTIDDEKLREEFAQFGTITSAKVMTDNNGKSKGFGFVCFSEP 382

Query: 227 EATSAAMRELLAGHMLEGKLLYVNIAANK 141
           E  + A+ E +   M+ GK LYV +A  K
Sbjct: 383 EEATKAISE-MHQFMVAGKPLYVALAQKK 410


>ref|XP_006482368.1| PREDICTED: polyadenylate-binding protein 7-like [Citrus sinensis]
          Length = 628

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 40/96 (41%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
 Frame = -1

Query: 422 HNFILQEHER--KHSGNNCFRRNLKRSVRKYC*SLKFGSYGTMTSLKVMCDENGISRGFG 249
           H F  +  ER  K+ G+N + +N+   V        F   GT+TS KVM DE GI++GFG
Sbjct: 278 HQFEEKRKERILKYKGSNVYVKNIDDDVTDEELKAHFSQCGTITSAKVMRDEKGINKGFG 337

Query: 248 CICFSNLEATSAAMRELLAGHMLEGKLLYVNIAANK 141
            +CFS+ E  S A+     G+ML  K LYV IA  K
Sbjct: 338 FVCFSSPEEASKAV-NTFHGYMLHRKPLYVAIAQRK 372


>ref|XP_006430351.1| hypothetical protein CICLE_v10011287mg [Citrus clementina]
           gi|557532408|gb|ESR43591.1| hypothetical protein
           CICLE_v10011287mg [Citrus clementina]
          Length = 629

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 40/96 (41%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
 Frame = -1

Query: 422 HNFILQEHER--KHSGNNCFRRNLKRSVRKYC*SLKFGSYGTMTSLKVMCDENGISRGFG 249
           H F  +  ER  K+ G+N + +N+   V        F   GT+TS KVM DE GI++GFG
Sbjct: 278 HQFEEKRKERILKYKGSNVYVKNIDDDVTDEELKAHFSQCGTITSAKVMRDEKGINKGFG 337

Query: 248 CICFSNLEATSAAMRELLAGHMLEGKLLYVNIAANK 141
            +CFS+ E  S A+     G+ML  K LYV IA  K
Sbjct: 338 FVCFSSPEEASKAV-NTFHGYMLHRKPLYVAIAQRK 372


>ref|XP_006409548.1| hypothetical protein EUTSA_v10022589mg [Eutrema salsugineum]
           gi|557110710|gb|ESQ51001.1| hypothetical protein
           EUTSA_v10022589mg [Eutrema salsugineum]
          Length = 649

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 39/90 (43%), Positives = 51/90 (56%)
 Frame = -1

Query: 410 LQEHERKHSGNNCFRRNLKRSVRKYC*SLKFGSYGTMTSLKVMCDENGISRGFGCICFSN 231
           L+E   K   +N + +NL  SV        F  YGT+TS KVM D NGISRG G + FS 
Sbjct: 305 LKEAADKFQSSNLYVKNLDDSVSDEKLKELFAPYGTVTSCKVMRDPNGISRGSGFVAFST 364

Query: 230 LEATSAAMRELLAGHMLEGKLLYVNIAANK 141
            E  + AM E ++G M++ K LYV +A  K
Sbjct: 365 PEEATKAMSE-MSGKMIDNKPLYVAVAQRK 393


>gb|EPY50998.1| mRNA export shuttling protein [Schizosaccharomyces cryophilus OY26]
          Length = 646

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 37/91 (40%), Positives = 52/91 (57%)
 Frame = -1

Query: 413 ILQEHERKHSGNNCFRRNLKRSVRKYC*SLKFGSYGTMTSLKVMCDENGISRGFGCICFS 234
           I  E   K+ G N F +NL+  V       +F ++GT+TS KVM DE G S+GFG +C++
Sbjct: 348 IKMEKMNKYQGVNLFVKNLQDEVDDERLKTEFSAFGTITSAKVMTDEQGKSKGFGFVCYT 407

Query: 233 NLEATSAAMRELLAGHMLEGKLLYVNIAANK 141
             E  + A+ E +   ML GK LYV +A  K
Sbjct: 408 TPEEANKAVTE-MNQRMLAGKPLYVALAQRK 437


>ref|XP_004978120.1| PREDICTED: polyadenylate-binding protein 2-like [Setaria italica]
          Length = 692

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 36/90 (40%), Positives = 52/90 (57%)
 Frame = -1

Query: 410 LQEHERKHSGNNCFRRNLKRSVRKYC*SLKFGSYGTMTSLKVMCDENGISRGFGCICFSN 231
           L++   K+ G N + +NL  S+        F ++G +TS KVMCD+NG+S+G G + FS 
Sbjct: 312 LKDAADKYQGLNLYLKNLDDSIGDDQLRELFSNFGKITSCKVMCDQNGLSKGSGFVAFST 371

Query: 230 LEATSAAMRELLAGHMLEGKLLYVNIAANK 141
            E  S A+ E + G M+ GK LYV  A  K
Sbjct: 372 REEASQALTE-MNGKMISGKPLYVAFAQRK 400


>ref|XP_002645756.1| C. briggsae CBR-PAB-2 protein [Caenorhabditis briggsae]
           gi|187033398|emb|CAP27634.1| Protein CBR-PAB-2
           [Caenorhabditis briggsae]
          Length = 685

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 35/89 (39%), Positives = 51/89 (57%)
 Frame = -1

Query: 407 QEHERKHSGNNCFRRNLKRSVRKYC*SLKFGSYGTMTSLKVMCDENGISRGFGCICFSNL 228
           QE  +++ G N + +N+   +        F S+GT+TS KVM DENG S+GFG +CF   
Sbjct: 329 QERVQRYQGVNLYVKNIDEELTDEGLRAHFASFGTITSAKVMVDENGRSKGFGFVCFEKP 388

Query: 227 EATSAAMRELLAGHMLEGKLLYVNIAANK 141
           E  +AA+ E +   M+  K LYV +A  K
Sbjct: 389 EEATAAVTE-MNSKMMGSKPLYVALAQRK 416


>emb|CCH46236.1| Polyadenylate-binding protein, cytoplasmic and nuclear
           [Wickerhamomyces ciferrii]
          Length = 652

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 38/84 (45%), Positives = 52/84 (61%)
 Frame = -1

Query: 392 KHSGNNCFRRNLKRSVRKYC*SLKFGSYGTMTSLKVMCDENGISRGFGCICFSNLEATSA 213
           K  G N F +NL  S+       +F S+GT++S+KVM DE+G S+GFG + FS+ E  S 
Sbjct: 340 KSQGVNLFVKNLDDSIDDEKLKEEFQSFGTISSVKVMIDESGKSKGFGFVSFSSPEEASR 399

Query: 212 AMRELLAGHMLEGKLLYVNIAANK 141
           A+ E +  HML GK LYV +A  K
Sbjct: 400 AISE-MNQHMLAGKPLYVALAQRK 422


>ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
           gi|355508977|gb|AES90119.1| Poly(A)-binding protein
           [Medicago truncatula]
          Length = 654

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 38/90 (42%), Positives = 51/90 (56%)
 Frame = -1

Query: 410 LQEHERKHSGNNCFRRNLKRSVRKYC*SLKFGSYGTMTSLKVMCDENGISRGFGCICFSN 231
           ++E   K+ G N + +NL  S+        F SYGT+TS KVM D NG+SRG G + FS 
Sbjct: 306 MKEAADKYQGANLYVKNLDDSIADEKLKELFSSYGTITSCKVMRDPNGVSRGSGFVAFST 365

Query: 230 LEATSAAMRELLAGHMLEGKLLYVNIAANK 141
            E  S A+ E + G M+  K LYV +A  K
Sbjct: 366 PEEASRALLE-MNGKMVASKPLYVTLAQRK 394


>emb|CCC50573.1| putative polyadenylate-binding protein 1 [Trypanosoma vivax Y486]
          Length = 482

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 36/81 (44%), Positives = 47/81 (58%)
 Frame = -1

Query: 383 GNNCFRRNLKRSVRKYC*SLKFGSYGTMTSLKVMCDENGISRGFGCICFSNLEATSAAMR 204
           GNN + RN      +    + F  YGT+ S +VM D NG SRGFG + F N +  +AA+R
Sbjct: 208 GNNLYVRNFDVEFSEKDLHVLFEEYGTIRSCRVMTDANGNSRGFGFVSFENADQANAALR 267

Query: 203 ELLAGHMLEGKLLYVNIAANK 141
           E + G ML GK L VNIA  +
Sbjct: 268 E-MNGRMLNGKPLIVNIAQRR 287


>gb|ESW98469.1| Polyadenylate-binding protein, cytoplasmic and nuclear [Ogataea
           parapolymorpha DL-1]
          Length = 629

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 37/89 (41%), Positives = 52/89 (58%)
 Frame = -1

Query: 407 QEHERKHSGNNCFRRNLKRSVRKYC*SLKFGSYGTMTSLKVMCDENGISRGFGCICFSNL 228
           QE   K+ G N F +NL  S+       +F  YGT+TS KVM D+ G S+GFG +C+S+ 
Sbjct: 322 QEQLNKYQGYNLFVKNLDDSIDDAKLEEEFKPYGTITSAKVMLDDAGKSKGFGFVCYSSP 381

Query: 227 EATSAAMRELLAGHMLEGKLLYVNIAANK 141
           E  + A+ E +   M+ GK LYV +A  K
Sbjct: 382 EEATKAITE-MHQRMVAGKPLYVALAQRK 409


>ref|XP_002673420.1| polyadenylate binding protein [Naegleria gruberi]
           gi|284087003|gb|EFC40676.1| polyadenylate binding
           protein [Naegleria gruberi]
          Length = 571

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 39/89 (43%), Positives = 51/89 (57%)
 Frame = -1

Query: 407 QEHERKHSGNNCFRRNLKRSVRKYC*SLKFGSYGTMTSLKVMCDENGISRGFGCICFSNL 228
           QE   K+ G N + +NL  SV       +F  +G +TS KVM D N  SRGFG +CF   
Sbjct: 288 QEKVNKYKGLNLYVKNLDDSVDDERLRQEFSKFGDITSAKVMSD-NKQSRGFGFVCFKTP 346

Query: 227 EATSAAMRELLAGHMLEGKLLYVNIAANK 141
           EA + A+ E ++GHM+  K LYVN A  K
Sbjct: 347 EAANKALTE-MSGHMIGSKPLYVNFAQPK 374