BLASTX nr result

ID: Ephedra28_contig00025277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00025277
         (921 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006857341.1| hypothetical protein AMTR_s00067p00095130 [A...    58   4e-06
ref|XP_006441494.1| hypothetical protein CICLE_v10020800mg [Citr...    57   7e-06

>ref|XP_006857341.1| hypothetical protein AMTR_s00067p00095130 [Amborella trichopoda]
           gi|548861434|gb|ERN18808.1| hypothetical protein
           AMTR_s00067p00095130 [Amborella trichopoda]
          Length = 773

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
 Frame = +2

Query: 215 EKSAKGKVMTQEERTIAVKTYVQEYVQSHSGKLPPCSAVKKEVGGSWYVLRKIYSKVCHE 394
           ++  K     +E+RT+A+KT+V++Y+  + G  P  + V +EVGGSWY+L+ I S +   
Sbjct: 23  KRQTKKTEEAKEQRTLAIKTFVKKYMMLNPGTFPKATLVHQEVGGSWYILKNILSDLKEN 82

Query: 395 LKGPTLQHEVTKGAT----TIQQSLTETLAGEIQAQS 493
           L      H+ T  A     T Q  +T +   E  A S
Sbjct: 83  LVSHFENHKTTASAEVDGGTGQAKVTISRCSETNANS 119


>ref|XP_006441494.1| hypothetical protein CICLE_v10020800mg [Citrus clementina]
           gi|557543756|gb|ESR54734.1| hypothetical protein
           CICLE_v10020800mg [Citrus clementina]
          Length = 359

 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 13/146 (8%)
 Frame = +2

Query: 218 KSAKGKVMTQEERTIAVKTYVQEYVQSHSGKLPPCSAVKKEVGGSWYVLRKIYSKVCHEL 397
           KS +G+ + ++ER   V+++V +Y   H GK P  S V+K VGGS+YV++ I  +V H+ 
Sbjct: 51  KSQRGRRLPRDERKAMVESFVNKYRVRHDGKFPTASDVRKNVGGSYYVVKIILQEVVHKC 110

Query: 398 K-------------GPTLQHEVTKGATTIQQSLTETLAGEIQAQSGGETELQTASITKNQ 538
           K             G   +HEV     T Q  + +  A  ++     E  L+   +    
Sbjct: 111 KSSSPDGTENLVGDGLLKEHEVCIDGGT-QNEVDKVAANNVEIGDVSEKHLE---VEGGP 166

Query: 539 EFQLLAQQSKKESFADLTKDDVQPDP 616
               +A+++  E   + T  D QP P
Sbjct: 167 FTSSVAERNIFEEVENPTAPDGQPGP 192


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