BLASTX nr result

ID: Ephedra28_contig00025258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00025258
         (628 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001328929.1| Zinc finger, C2H2 type family protein [Trich...    56   7e-06

>ref|XP_001328929.1| Zinc finger, C2H2 type family protein [Trichomonas vaginalis G3]
            gi|121911878|gb|EAY16706.1| Zinc finger, C2H2 type family
            protein [Trichomonas vaginalis G3]
          Length = 802

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 56/218 (25%), Positives = 90/218 (41%), Gaps = 22/218 (10%)
 Frame = -1

Query: 625  KKSNQEQKTSPSKV------KKEVNKSATIKGSSLNRSKLTEDKELSSRHQSLPPKHQGI 464
            KK N E K+   K+      KKE ++S   +  S    K + D+E S   +S   K +  
Sbjct: 444  KKDNDEDKSESKKIDEKSESKKEKSESKIKEEKSEGIKKKSNDEEKS---ESKKEKSESK 500

Query: 463  STKCEREPEASVPSTSGQDGSAALKTESPNKKSKVAPKELQGKINGK--PQNVEKAVKTE 290
              + ++ P      T G +     K +    K +    E + K N K   +N +K  ++E
Sbjct: 501  KAEEKKGPTNQSSETKGNEEKNGPKRDKSESKIQDTKDESKSKNNSKISTKNDQKQSESE 560

Query: 289  KPQVDVKQNTAS------------SIVKCSTSISTKLAGPEGTEP--SKLQRAEGLKDSK 152
            K QV+++  ++S            S  K S +I    +  + ++    K Q   GLKD  
Sbjct: 561  KTQVEIEDTSSSKSDKLQFKSSSESAKKKSDTIEFASSSDDSSDKPIPKSQSKSGLKDEP 620

Query: 151  SEENSVTDSDEPSTSDDYDYFDFGSLPLPVMQPIPEDN 38
              E  +T +DE   SD +D     S P P  QP   +N
Sbjct: 621  KPEKKIT-NDESDNSDSFDKLLDNSKPEPKQQPHKVEN 657


Top