BLASTX nr result

ID: Ephedra28_contig00025205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00025205
         (944 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17075.1| unknown [Picea sitchensis]                              67   8e-09
gb|ABR16339.1| unknown [Picea sitchensis]                              64   1e-07

>gb|ABR17075.1| unknown [Picea sitchensis]
          Length = 466

 Score = 67.4 bits (163), Expect = 8e-09
 Identities = 52/170 (30%), Positives = 79/170 (46%), Gaps = 2/170 (1%)
 Frame = +2

Query: 38  RSYSTGHSLVRLRKNMGGEKSTEWFISTPNGLTPASHKTYTYAVNQGLAMHSKSQGFNIG 217
           RS+STGHSLVRL K++  + +TEW+IST  GLTP  H+  +         HS+SQ     
Sbjct: 273 RSHSTGHSLVRLPKDLD-QSATEWYISTAEGLTPGLHRNCSLTARP----HSRSQRSLAS 327

Query: 218 GSKFSRFPLFSKXXXXXXXXXXXXD-NREQNSGS-IXXXXXXXXXXXXNSTEMDPALFRR 391
            S+    P  +K            D      +GS +            + + M+P+ F R
Sbjct: 328 KSR----PALAKQDSLRGAASFSEDAGTSSGTGSGLRWYERGLRSERLSLSSMNPSSFLR 383

Query: 392 SFSERTGPVFKPEGYNPQTQIARVEKEDDARAYILDLKRTLKRITGLEDE 541
           + SE   P +       + Q +    + + +AY+  LK TLKR+TG + E
Sbjct: 384 THSEHRAPSYS------RYQDSSAGSQQEQKAYLQSLKSTLKRLTGRDRE 427


>gb|ABR16339.1| unknown [Picea sitchensis]
          Length = 467

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 51/168 (30%), Positives = 75/168 (44%)
 Frame = +2

Query: 38  RSYSTGHSLVRLRKNMGGEKSTEWFISTPNGLTPASHKTYTYAVNQGLAMHSKSQGFNIG 217
           RSYSTGHSLVRLRK+M  + +TEW+I T  GL P   +  +         HS+SQG +  
Sbjct: 265 RSYSTGHSLVRLRKDM-DQLATEWYICTAEGLKPGLQRNCSLTA----LSHSRSQGPSTS 319

Query: 218 GSKFSRFPLFSKXXXXXXXXXXXXDNREQNSGSIXXXXXXXXXXXXNSTEMDPALFRRSF 397
             +    P FSK             +R+                    + M P+ F RS+
Sbjct: 320 EIR----PGFSKQASISGTASC---SRDTGGSGRRWYERGLRSERLTISSMYPSSFLRSY 372

Query: 398 SERTGPVFKPEGYNPQTQIARVEKEDDARAYILDLKRTLKRITGLEDE 541
           SE+          + + Q +    + + + Y+  LK TLKR+TG + E
Sbjct: 373 SEQRTLA------DSRNQESSAGSQQERKVYLQSLKHTLKRLTGRDRE 414


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