BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00025178
         (420 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containi...   112   5e-23
ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containi...   111   1e-22
emb|CBI33142.3| unnamed protein product [Vitis vinifera]              111   1e-22
emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]   111   1e-22
ref|XP_006842988.1| hypothetical protein AMTR_s00076p00102070 [A...   109   3e-22
ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containi...   109   4e-22
gb|ABR17838.1| unknown [Picea sitchensis]                             109   4e-22
emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]   109   4e-22
gb|AEP33771.1| organelle transcript processing 82, partial [Thla...   108   1e-21
ref|XP_004301089.1| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21
ref|XP_003518395.2| PREDICTED: pentatricopeptide repeat-containi...   106   3e-21
ref|XP_006857380.1| hypothetical protein AMTR_s00067p00130250 [A...   106   3e-21
ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Sela...   106   3e-21
ref|XP_006853296.1| hypothetical protein AMTR_s00032p00029450 [A...   106   4e-21
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi...   106   4e-21
ref|XP_004292817.1| PREDICTED: pentatricopeptide repeat-containi...   105   5e-21
gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygr...   105   5e-21
gb|EXC12414.1| hypothetical protein L484_001796 [Morus notabilis]     105   6e-21
gb|ESW11951.1| hypothetical protein PHAVU_008G072900g [Phaseolus...   105   6e-21
ref|NP_172596.1| pentatricopeptide repeat-containing protein [Ar...   105   6e-21

>ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  112 bits (280), Expect = 5e-23
 Identities = 60/144 (41%), Positives = 89/144 (61%), Gaps = 5/144 (3%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSR-GYVPSSGSLVTALSSCSPS 177
           +VFD+MP RD VAWN +++GYA+ G  +A+ G+   M    G  P + +LV+ L +C+ +
Sbjct: 281 RVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADA 340

Query: 178 EG----REVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMI 345
           +     REVH+F +R G   + N+S AI+ +Y K   V+SA K F GM  ++ VSWNAMI
Sbjct: 341 QALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMI 400

Query: 346 AGYAQNGCYIQALEHYSTMWGSSI 417
            GYA+NG   +AL  +  M G  +
Sbjct: 401 KGYAENGDATEALALFKRMVGEGV 424



 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 54/138 (39%), Positives = 77/138 (55%), Gaps = 4/138 (2%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSP-- 174
           +VFD M  R++V+WN MI GYA+ G    +  LF+ M   G   +  S++ AL +C    
Sbjct: 383 KVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELG 442

Query: 175 --SEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
              EGR VH  ++R G+ S  N+ NA++TMY K    + A + F  + +K  VSWNAMI 
Sbjct: 443 FLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMIL 502

Query: 349 GYAQNGCYIQALEHYSTM 402
           G  QNG    A+  +S M
Sbjct: 503 GCTQNGSSEDAVRLFSRM 520



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCS--- 171
           QVFD++  +  V+WN MI G  Q GS + +  LF  M      P S +LV+ + + +   
Sbjct: 484 QVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADIS 543

Query: 172 -PSEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
            P + R +H + +R  +  +  +  A++ MY+K   V  A   F     + +++WNAMI 
Sbjct: 544 DPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIH 603

Query: 349 GYAQNGCYIQALEHYSTMWGS 411
           GY  +G    A+E +  M  S
Sbjct: 604 GYGSHGSGKVAVELFEEMKSS 624


>ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 590

 Score =  111 bits (277), Expect = 1e-22
 Identities = 57/137 (41%), Positives = 84/137 (61%), Gaps = 4/137 (2%)
 Frame = +1

Query: 4   VFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSP--- 174
           +FD++P RD  +WN MI+GYAQ GS + +  L   M   G  P   +L++ L++CS    
Sbjct: 255 LFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLAS 314

Query: 175 -SEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAG 351
             EGR+ H  VL+SG  S  ++ NA++TMY K   +  +E AF  + H D+VSWNAMIA 
Sbjct: 315 LQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAA 374

Query: 352 YAQNGCYIQALEHYSTM 402
           +A++G Y +AL  +  M
Sbjct: 375 FARHGFYDRALASFGEM 391



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 50/162 (30%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSL----------- 147
           Q F  MP R+T +WN MISG  +    + +  LF +M  R  +  +  +           
Sbjct: 130 QYFQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQ 189

Query: 148 VTALSSCSPSEGREVHSFVLRSGMVSEGNLSNA-----------------IVTMYSKHHC 276
             AL +C P +   V   V+ SG V  G    A                 ++T Y K   
Sbjct: 190 ARALFNCMPQKN-VVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGK 248

Query: 277 VESAEKAFCGMLHKDLVSWNAMIAGYAQNGCYIQALEHYSTM 402
            + A+  F  +  +DL SWNAMI GYAQNG   +AL+ +S M
Sbjct: 249 TDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQM 290



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 43/135 (31%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSPSE 180
           Q+FD+MP RDTV+WN +I+GY + G    S  LF  M ++  V    S  + ++ C   E
Sbjct: 68  QLFDEMPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVV----SWNSMIAGCIEDE 123

Query: 181 GREVHSFVLRSGMVSEGNLS-NAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAGYA 357
            R   ++     M      S NA+++   ++  VE A + F  M  ++++S+ AM+ GYA
Sbjct: 124 -RIDEAWQYFQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYA 182

Query: 358 QNGCYIQALEHYSTM 402
           + G   QA   ++ M
Sbjct: 183 KIGEIEQARALFNCM 197


>emb|CBI33142.3| unnamed protein product [Vitis vinifera]
          Length = 1198

 Score =  111 bits (277), Expect = 1e-22
 Identities = 57/137 (41%), Positives = 84/137 (61%), Gaps = 4/137 (2%)
 Frame = +1

Query: 4   VFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSP--- 174
           +FD++P RD  +WN MI+GYAQ GS + +  L   M   G  P   +L++ L++CS    
Sbjct: 183 LFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLAS 242

Query: 175 -SEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAG 351
             EGR+ H  VL+SG  S  ++ NA++TMY K   +  +E AF  + H D+VSWNAMIA 
Sbjct: 243 LQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAA 302

Query: 352 YAQNGCYIQALEHYSTM 402
           +A++G Y +AL  +  M
Sbjct: 303 FARHGFYDRALASFGEM 319



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 50/162 (30%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSL----------- 147
           Q F  MP R+T +WN MISG  +    + +  LF +M  R  +  +  +           
Sbjct: 58  QYFQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQ 117

Query: 148 VTALSSCSPSEGREVHSFVLRSGMVSEGNLSNA-----------------IVTMYSKHHC 276
             AL +C P +   V   V+ SG V  G    A                 ++T Y K   
Sbjct: 118 ARALFNCMPQKN-VVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGK 176

Query: 277 VESAEKAFCGMLHKDLVSWNAMIAGYAQNGCYIQALEHYSTM 402
            + A+  F  +  +DL SWNAMI GYAQNG   +AL+ +S M
Sbjct: 177 TDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQM 218


>emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
          Length = 1301

 Score =  111 bits (277), Expect = 1e-22
 Identities = 57/137 (41%), Positives = 84/137 (61%), Gaps = 4/137 (2%)
 Frame = +1

Query: 4   VFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSP--- 174
           +FD++P RD  +WN MI+GYAQ GS + +  L   M   G  P   +L++ L++CS    
Sbjct: 255 LFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLAS 314

Query: 175 -SEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAG 351
             EGR+ H  VL+SG  S  ++ NA++TMY K   +  +E AF  + H D+VSWNAMIA 
Sbjct: 315 LQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAA 374

Query: 352 YAQNGCYIQALEHYSTM 402
           +A++G Y +AL  +  M
Sbjct: 375 FARHGFYDRALASFGEM 391



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 50/162 (30%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSL----------- 147
           Q F  MP R+T +WN MISG  +    + +  LF +M  R  +  +  +           
Sbjct: 130 QYFQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQ 189

Query: 148 VTALSSCSPSEGREVHSFVLRSGMVSEGNLSNA-----------------IVTMYSKHHC 276
             AL +C P +   V   V+ SG V  G    A                 ++T Y K   
Sbjct: 190 ARALFNCMPQKN-VVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGK 248

Query: 277 VESAEKAFCGMLHKDLVSWNAMIAGYAQNGCYIQALEHYSTM 402
            + A+  F  +  +DL SWNAMI GYAQNG   +AL+ +S M
Sbjct: 249 TDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQM 290



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSPSE 180
           QVFD+MP RDTV+WN +I+GY + G    S  LF  M ++  V    S  + ++ C   E
Sbjct: 68  QVFDEMPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVV----SWNSMIAGCIEDE 123

Query: 181 GREVHSFVLRSGMVSEGNLS-NAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAGYA 357
            R   ++     M      S NA+++   ++  VE A + F  M  ++++S+ AM+ GYA
Sbjct: 124 -RIDEAWQYFQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYA 182

Query: 358 QNGCYIQALEHYSTM 402
           + G   QA   ++ M
Sbjct: 183 KIGEIEQARALFNCM 197


>ref|XP_006842988.1| hypothetical protein AMTR_s00076p00102070 [Amborella trichopoda]
           gi|548845185|gb|ERN04663.1| hypothetical protein
           AMTR_s00076p00102070 [Amborella trichopoda]
          Length = 749

 Score =  109 bits (273), Expect = 3e-22
 Identities = 57/137 (41%), Positives = 89/137 (64%), Gaps = 6/137 (4%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCS-RGYVPSSGSLVTALSSCSP- 174
           ++FD +P RD V+WN +I+G AQ G  + +FG F+ M S +   P+  ++ T LS C+  
Sbjct: 235 KLFDWLPDRDVVSWNAIIAGCAQNGLFEEAFGYFQCMVSGKDQAPNYATIATVLSICAEL 294

Query: 175 ----SEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAM 342
                EG EVH +V + G+VS  +++NA+++ YS+   +E AE+ F  M  +D+VSWNA+
Sbjct: 295 EGQCEEGEEVHCYVEKVGLVSNSSVANALLSYYSRVEDMEGAERVFREMKWRDIVSWNAV 354

Query: 343 IAGYAQNGCYIQALEHY 393
           IAGYAQNG   +A+E +
Sbjct: 355 IAGYAQNGWLSKAVEFF 371



 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 6/139 (4%)
 Frame = +1

Query: 4   VFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDM--CSRGYVPSSGSLVTALSSCSPS 177
           +F +MP RD V WN+ +S   Q      +  L  +M       +P+S +L  A ++C+  
Sbjct: 133 LFQEMPHRDVVTWNICVSASVQTMRYAEALTLVHEMHESEEMPMPNSITLAVAFTACAKL 192

Query: 178 EG----REVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMI 345
                 + +H + ++ G  S   ++NAI++MYSK   V  A K F  +  +D+VSWNA+I
Sbjct: 193 NALLSSQGLHGYAIKMGFESWTLVANAILSMYSKCQKVLDACKLFDWLPDRDVVSWNAII 252

Query: 346 AGYAQNGCYIQALEHYSTM 402
           AG AQNG + +A  ++  M
Sbjct: 253 AGCAQNGLFEEAFGYFQCM 271



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSP-- 174
           +VF +M  RD V+WN +I+GYAQ G    +   FRD+   G  P S ++++ L  C+   
Sbjct: 338 RVFREMKWRDIVSWNAVIAGYAQNGWLSKAVEFFRDLLCDGMNPESITIISLLPLCAQLG 397

Query: 175 --SEGREVHSFV-LRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMI 345
               GR +H  + +  G+     + NA+++ Y+K      A   F  M ++D++SWN M+
Sbjct: 398 HVHVGRMIHGLIAMDMGLHDNVAVRNALISFYAKCGETVDAYLTFETMPNRDIISWNTML 457

Query: 346 AGYAQNG 366
           A  AQ G
Sbjct: 458 ATCAQIG 464



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 1/139 (0%)
 Frame = +1

Query: 7   FDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALS-SCSPSEG 183
           F+ MP RD ++WN M++  AQ G       L   M   G  P S ++++ +S   +P  G
Sbjct: 442 FETMPNRDIISWNTMLATCAQIGEEDKIGSLLNRMIMEGTKPDSVTILSIISFYINPRHG 501

Query: 184 REVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAGYAQN 363
           +EVH + +RS                      + AE  F  M  +DL +WN MI   A+N
Sbjct: 502 KEVHGYCIRS----------------------DDAETIFREMRERDLTTWNLMIQLNAEN 539

Query: 364 GCYIQALEHYSTMWGSSIR 420
               +A++ +  +    +R
Sbjct: 540 TNPDRAIDLFHDLQNQGMR 558


>ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  109 bits (272), Expect = 4e-22
 Identities = 57/144 (39%), Positives = 87/144 (60%), Gaps = 4/144 (2%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSP-- 174
           ++FD+MP RD  +WN +IS Y Q G P+ +  LF +M   G+ P S +L T +SSC+   
Sbjct: 162 KLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLL 221

Query: 175 --SEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
               G+E+H  ++RSG   +G +S+A+V MY K  C+E A++ F  +  K++VSWN+MIA
Sbjct: 222 DLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIA 281

Query: 349 GYAQNGCYIQALEHYSTMWGSSIR 420
           GY+  G     +E +  M    IR
Sbjct: 282 GYSLKGDSKSCIELFRRMDEEGIR 305



 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 4/143 (2%)
 Frame = +1

Query: 4   VFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSP--- 174
           VF  MP  + V+WNVMISGY + GS   +  +F DM   G  P + +  + L +CS    
Sbjct: 365 VFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAV 424

Query: 175 -SEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAG 351
             +G+E+H+F++ S +     +  A++ MY+K   V+ A   F  +  +D VSW +MIA 
Sbjct: 425 LEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAA 484

Query: 352 YAQNGCYIQALEHYSTMWGSSIR 420
           Y  +G   +AL+ +  M  S  +
Sbjct: 485 YGSHGQAFEALKLFEKMQQSDAK 507



 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 44/144 (30%), Positives = 87/144 (60%), Gaps = 4/144 (2%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSPSE 180
           +VF+++  ++ V+WN MI+GY+  G  ++   LFR M   G  P+  +L + L +CS S 
Sbjct: 263 EVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSV 322

Query: 181 ----GREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
               G+ +H +++R+ + ++  ++++++ +Y K   + SAE  F  M   ++VSWN MI+
Sbjct: 323 NLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMIS 382

Query: 349 GYAQNGCYIQALEHYSTMWGSSIR 420
           GY + G Y++AL  ++ M  + ++
Sbjct: 383 GYVKVGSYLEALVIFTDMRKAGVK 406


>gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  109 bits (272), Expect = 4e-22
 Identities = 54/138 (39%), Positives = 86/138 (62%), Gaps = 4/138 (2%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSP-- 174
           QVFD+MP RD V+WN +I+GY+Q G P  +  LF +M   G  P+S +LV+ +  C+   
Sbjct: 176 QVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLL 235

Query: 175 --SEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
              +G+++H + +RSG+ S+  + N +V MY+K   V +A K F  M  +D+ SWNA+I 
Sbjct: 236 ALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIG 295

Query: 349 GYAQNGCYIQALEHYSTM 402
           GY+ N  + +AL  ++ M
Sbjct: 296 GYSLNSQHHEALAFFNRM 313



 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 4/144 (2%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSP-- 174
           ++F++MP RD  +WN +I GY+       +   F  M  RG  P+S ++V+ L +C+   
Sbjct: 277 KLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLF 336

Query: 175 --SEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
              +G+++H + +RSG  S   + NA+V MY+K   V SA K F  M  K++V+WNA+I+
Sbjct: 337 ALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIIS 396

Query: 349 GYAQNGCYIQALEHYSTMWGSSIR 420
           GY+Q+G   +AL  +  M    I+
Sbjct: 397 GYSQHGHPHEALALFIEMQAQGIK 420



 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 49/138 (35%), Positives = 82/138 (59%), Gaps = 4/138 (2%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSP-- 174
           ++F++MP ++ VAWN +ISGY+Q G P  +  LF +M ++G  P S ++V+ L +C+   
Sbjct: 378 KLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFL 437

Query: 175 --SEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
              +G+++H + +RSG  S   +   +V +Y+K   V +A+K F  M  +D+VSW  MI 
Sbjct: 438 ALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMIL 497

Query: 349 GYAQNGCYIQALEHYSTM 402
            Y  +G    AL  +S M
Sbjct: 498 AYGIHGHGEDALALFSKM 515



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 4/135 (2%)
 Frame = +1

Query: 28  DTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSPSE----GREVH 195
           + V W   I GY + G    +  L+  M   G  P     ++ + +C        GR+VH
Sbjct: 84  NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143

Query: 196 SFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAGYAQNGCYI 375
             ++  G  S+  +  A+ +MY+K   +E+A + F  M  +D+VSWNA+IAGY+QNG   
Sbjct: 144 EDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPY 203

Query: 376 QALEHYSTMWGSSIR 420
           +AL  +S M  + I+
Sbjct: 204 EALALFSEMQVNGIK 218


>emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  109 bits (272), Expect = 4e-22
 Identities = 57/144 (39%), Positives = 87/144 (60%), Gaps = 4/144 (2%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSP-- 174
           ++FD+MP RD  +WN +IS Y Q G P+ +  LF +M   G+ P S +L T +SSC+   
Sbjct: 354 KLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLL 413

Query: 175 --SEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
               G+E+H  ++RSG   +G +S+A+V MY K  C+E A++ F  +  K++VSWN+MIA
Sbjct: 414 DLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIA 473

Query: 349 GYAQNGCYIQALEHYSTMWGSSIR 420
           GY+  G     +E +  M    IR
Sbjct: 474 GYSLKGDSKSCIELFRRMDEEGIR 497



 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 4/143 (2%)
 Frame = +1

Query: 4   VFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSP--- 174
           VF  MP  + V+WNVMISGY + GS   +  +F DM   G  P + +  + L +CS    
Sbjct: 557 VFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAV 616

Query: 175 -SEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAG 351
             +G+E+H+F++ S +     +  A++ MY+K   V+ A   F  +  +D VSW +MIA 
Sbjct: 617 LEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAA 676

Query: 352 YAQNGCYIQALEHYSTMWGSSIR 420
           Y  +G   +AL+ +  M  S  +
Sbjct: 677 YGSHGQAFEALKLFEKMQQSDAK 699



 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 44/144 (30%), Positives = 87/144 (60%), Gaps = 4/144 (2%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSPSE 180
           +VF+++  ++ V+WN MI+GY+  G  ++   LFR M   G  P+  +L + L +CS S 
Sbjct: 455 EVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSV 514

Query: 181 ----GREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
               G+ +H +++R+ + ++  ++++++ +Y K   + SAE  F  M   ++VSWN MI+
Sbjct: 515 NLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMIS 574

Query: 349 GYAQNGCYIQALEHYSTMWGSSIR 420
           GY + G Y++AL  ++ M  + ++
Sbjct: 575 GYVKVGSYLEALVIFTDMRKAGVK 598


>gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  108 bits (269), Expect = 1e-21
 Identities = 56/138 (40%), Positives = 84/138 (60%), Gaps = 4/138 (2%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSPSE 180
           ++FD++P +D V+WN MISGYA+ GS + +  LF++M      P  G++VT LS+C+ S 
Sbjct: 153 EMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSR 212

Query: 181 ----GREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
               GR+VHS++   G  S   + NA++ +YSK   VE+A   F G+  KD+VSWN +I 
Sbjct: 213 SVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIG 272

Query: 349 GYAQNGCYIQALEHYSTM 402
           GY     Y +AL  +  M
Sbjct: 273 GYTHMNLYKEALLLFQEM 290



 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 35/174 (20%)
 Frame = +1

Query: 4   VFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSPS-- 177
           VF  +   + + WN M+ GYA    P ++  L+  M S G +P+S +    L SC+ S  
Sbjct: 22  VFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKA 81

Query: 178 --EGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVS------- 330
             EG+++H  VL+ G   +  +  ++++MY+++  +E A K F    H+D+VS       
Sbjct: 82  FEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITG 141

Query: 331 ------------------------WNAMIAGYAQNGCYIQALEHYSTMWGSSIR 420
                                   WNAMI+GYA+ G Y +ALE +  M  +++R
Sbjct: 142 YASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVR 195



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 42/139 (30%), Positives = 76/139 (54%), Gaps = 6/139 (4%)
 Frame = +1

Query: 4   VFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSP--- 174
           +F+ +  +D V+WN +I GY      + +  LF++M   G  P+  ++V+ L +C+    
Sbjct: 255 LFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGA 314

Query: 175 -SEGREVHSFVLRS--GMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMI 345
              GR +H ++ +    + +  +L  +++ MY+K   +E+A + F  MLHK L SWNAMI
Sbjct: 315 IDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMI 374

Query: 346 AGYAQNGCYIQALEHYSTM 402
            G+A +G      + +S M
Sbjct: 375 FGFAMHGRANAGFDLFSRM 393


>ref|XP_004301089.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Fragaria vesca subsp. vesca]
          Length = 957

 Score =  107 bits (267), Expect = 2e-21
 Identities = 52/137 (37%), Positives = 83/137 (60%), Gaps = 4/137 (2%)
 Frame = +1

Query: 4   VFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSPSE- 180
           +FD+M  + +V+WN MISGY+Q G P  +  LFR M S G +PS  + ++ L +CS    
Sbjct: 541 LFDRMEHQSSVSWNAMISGYSQIGLPDEALDLFRQMLSSGILPSEIATMSVLGACSQLSA 600

Query: 181 ---GREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAG 351
              G+E+H F L++G   +  +  +++ MY+K  C+E + +AF  +  KD+ SWN +IAG
Sbjct: 601 LRLGKELHCFALKAGFTEDLFVGCSLIDMYAKSGCIEQSHRAFDSLTKKDVASWNVIIAG 660

Query: 352 YAQNGCYIQALEHYSTM 402
           Y  +G   +ALE +  M
Sbjct: 661 YGIHGHGNKALELFGEM 677



 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 50/128 (39%), Positives = 72/128 (56%), Gaps = 6/128 (4%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCS--RGYVPSSGSLVTALSSCSP 174
           ++FDKMP R+ V+WN MI G+++ G  + SFGL         G+VP   +LVT L  C  
Sbjct: 236 KMFDKMPERNLVSWNSMIGGFSENGMCEESFGLLVRFLEGEEGFVPDEATLVTVLPVCGG 295

Query: 175 SE----GREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAM 342
                 G E+H   ++ G+  E  LSNA++ MY K  C++ A   F     K++VSWNA 
Sbjct: 296 KGEVKMGMEIHGLAVKLGINKELMLSNALMDMYLKCGCLKEARVLFEKNERKNVVSWNAF 355

Query: 343 IAGYAQNG 366
           I GY++ G
Sbjct: 356 IGGYSREG 363



 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 48/143 (33%), Positives = 79/143 (55%), Gaps = 4/143 (2%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSPSE 180
           QVF  + T+   +WN ++ G AQ G P+ +  L+  M   G    S S+ + L +CS  +
Sbjct: 439 QVFYGIETKTVSSWNAVMGGLAQNGDPKKALDLYLQMKQSGLDTDSFSIGSLLLACSHLK 498

Query: 181 ----GREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
               G+E+H FVLR+G+  +  +  ++++ Y +   + +A   F  M H+  VSWNAMI+
Sbjct: 499 FLQYGKEIHGFVLRNGLELDSFIGISLLSFYIQCGKLSTARALFDRMEHQSSVSWNAMIS 558

Query: 349 GYAQNGCYIQALEHYSTMWGSSI 417
           GY+Q G   +AL+ +  M  S I
Sbjct: 559 GYSQIGLPDEALDLFRQMLSSGI 581



 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 38/126 (30%), Positives = 70/126 (55%), Gaps = 5/126 (3%)
 Frame = +1

Query: 4   VFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRG-YVPSSGSLVTALSSCSP-- 174
           VFD +P ++   WN M+SGY++      +   F ++     + P + ++   + +C    
Sbjct: 135 VFDALPRKNLFQWNAMVSGYSRNNLNAEAIDTFIELLRAAEFKPDNFTMPCVIKACGGVL 194

Query: 175 --SEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
               G+ VH  V++ G+VS+  + NA++ +Y+K   +  A K F  M  ++LVSWN+MI 
Sbjct: 195 DVGLGQGVHGMVVKMGLVSDVFIGNALIALYAKFGMLRDAVKMFDKMPERNLVSWNSMIG 254

Query: 349 GYAQNG 366
           G+++NG
Sbjct: 255 GFSENG 260



 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 4/142 (2%)
 Frame = +1

Query: 4   VFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSPSEG 183
           +F+K   ++ V+WN  I GY++ G    +F L R M     V    +++  L +C     
Sbjct: 340 LFEKNERKNVVSWNAFIGGYSREGDVSGAFDLLRKMQMEEKVDVV-TVLNVLPACLTESE 398

Query: 184 ----REVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAG 351
               +E+H +  R G   +  ++NA V  Y+K   + SAE+ F G+  K + SWNA++ G
Sbjct: 399 LLRLKELHGYSFRHGFQDDELVANAFVAAYAKCGSLSSAEQVFYGIETKTVSSWNAVMGG 458

Query: 352 YAQNGCYIQALEHYSTMWGSSI 417
            AQNG   +AL+ Y  M  S +
Sbjct: 459 LAQNGDPKKALDLYLQMKQSGL 480


>ref|XP_003518395.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like isoform X1 [Glycine max]
          Length = 615

 Score =  106 bits (265), Expect = 3e-21
 Identities = 55/133 (41%), Positives = 86/133 (64%), Gaps = 5/133 (3%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSR-GYVPSSGSLVTALSSCSP- 174
           +VFD++P RD+V+WN MI+GYA+ G  + +  +FR+M  R G+ P   SLV+ L +C   
Sbjct: 179 KVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGEL 238

Query: 175 ---SEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMI 345
                GR V  FV+  GM     + +A+++MY+K   +ESA + F GM  +D+++WNA+I
Sbjct: 239 GDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRIFDGMAARDVITWNAVI 298

Query: 346 AGYAQNGCYIQAL 384
           +GYAQNG   +A+
Sbjct: 299 SGYAQNGMADEAI 311



 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 4/138 (2%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSP-- 174
           ++FD M  RD + WN +ISGYAQ G    +  LF  M       +  +L   LS+C+   
Sbjct: 281 RIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIG 340

Query: 175 --SEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
               G+++  +  + G   +  ++ A++ MY+K   +++A++ F  M  K+  SWNAMI+
Sbjct: 341 ALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMIS 400

Query: 349 GYAQNGCYIQALEHYSTM 402
             A +G   +AL  +  M
Sbjct: 401 ALAAHGKAKEALSLFQHM 418



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
 Frame = +1

Query: 19  PTRDTVAWNVMISGYAQCG-SPQASFGLFRDMCSRGYVPSSGSLVTALSSC----SPSEG 183
           P  +  A+N+MI        +   +  LF  M S    P + +      SC    S S  
Sbjct: 83  PHPNDYAFNIMIRALTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHA 142

Query: 184 REVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAGYAQN 363
              HS + +  + S+ + +++++T Y++   V SA K F  + H+D VSWN+MIAGYA+ 
Sbjct: 143 CAAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKA 202

Query: 364 GCYIQALEHYSTM 402
           GC  +A+E +  M
Sbjct: 203 GCAREAVEVFREM 215


>ref|XP_006857380.1| hypothetical protein AMTR_s00067p00130250 [Amborella trichopoda]
           gi|548861473|gb|ERN18847.1| hypothetical protein
           AMTR_s00067p00130250 [Amborella trichopoda]
          Length = 823

 Score =  106 bits (265), Expect = 3e-21
 Identities = 58/139 (41%), Positives = 88/139 (63%), Gaps = 5/139 (3%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSPS- 177
           ++FD+MP R+ ++WNVMI GYA+ GSP     LFR+M  +G   +  ++V+ L++C+ S 
Sbjct: 208 KLFDEMPERNQISWNVMIGGYARSGSPGHGLKLFREMQKKGIKGTITTMVSILNACAKSA 267

Query: 178 ---EGREVHSFVLRSGMVSEG-NLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMI 345
              EGR VH +++RS  +  G  L  A+V MY K   ++SA++ F  M  ++LVSWNAMI
Sbjct: 268 RLLEGRSVHCYIIRSSSMDSGVILETALVDMYCKCGKLDSAKRVFYEMPERNLVSWNAMI 327

Query: 346 AGYAQNGCYIQALEHYSTM 402
            G A  G Y +AL  + +M
Sbjct: 328 FGQAICGDYKEALALFDSM 346



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 34/137 (24%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
 Frame = +1

Query: 4   VFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSP--- 174
           VF ++ + +  A+N +I   +    P  +   + +M  +G  P++ +    ++SC+    
Sbjct: 77  VFRQLNSPELRAYNTIIKALSLSSDPIQAISFYHEMVLKGVHPNNFTFPPLVASCAKVTA 136

Query: 175 -SEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAG 351
            +EG + H+ V++ G      ++N++V MY+    +  A + F  M+ +D VSWN+MI G
Sbjct: 137 INEGEKCHTEVVKRGFDQVIFVANSLVHMYACFKLISYARQVFYEMVERDFVSWNSMING 196

Query: 352 YAQNGCYIQALEHYSTM 402
           +   G  + A + +  M
Sbjct: 197 HILLGDIMNARKLFDEM 213


>ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
           gi|300142387|gb|EFJ09088.1| hypothetical protein
           SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  106 bits (265), Expect = 3e-21
 Identities = 59/143 (41%), Positives = 84/143 (58%), Gaps = 4/143 (2%)
 Frame = +1

Query: 4   VFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSPS-- 177
           VFD +  ++  +W +M++ Y+Q G  + +  LF  M   G  P     V AL +C+ S  
Sbjct: 14  VFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVVFVIALDACAASGE 73

Query: 178 --EGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAG 351
              GR++HS V+ SG+ S   +SN++V MY K   V  AEK F GML +D+VSW AM+A 
Sbjct: 74  LDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAV 133

Query: 352 YAQNGCYIQALEHYSTMWGSSIR 420
           YAQNGC+ QALE  S M    ++
Sbjct: 134 YAQNGCWSQALECLSRMDAEGVK 156



 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 7/141 (4%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQC--GSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSP 174
           + FD +  +  VAW+++++ YAQ   G  + +F  F++M + G  P   + V+AL +C+ 
Sbjct: 520 KAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAA 579

Query: 175 ----SEGREVHSFVLRSGMVSEGN-LSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNA 339
                 GR +H     SG V     L N I+ MY K      A+  F  M  K L+SWN+
Sbjct: 580 MATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNS 639

Query: 340 MIAGYAQNGCYIQALEHYSTM 402
           +I  YA NG  ++AL     M
Sbjct: 640 LIVAYAHNGHALEALSSLQEM 660



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 48/138 (34%), Positives = 73/138 (52%), Gaps = 5/138 (3%)
 Frame = +1

Query: 4   VFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSP--- 174
           + + M  RD VAWN M++  AQ G    +  L R M   G+  +  + ++ L +C+    
Sbjct: 317 LLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEA 376

Query: 175 -SEGREVHSFVLRSGMVS-EGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
            S+GRE+H+ VL  G++  E  + N+++TMY K    E+A   F  M  KD VSWNA+I 
Sbjct: 377 LSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVIN 436

Query: 349 GYAQNGCYIQALEHYSTM 402
               N  +  ALE +  M
Sbjct: 437 ASVGNSKFQDALELFHGM 454



 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSPSE 180
           +VFD M  RD V+W  M++ YAQ G    +      M + G  P+  + VT +  C+   
Sbjct: 114 KVFDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLR 173

Query: 181 ----GREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
               GR++H  ++  G+  +G L NA+V MY      +  +  F  M    ++ W  MIA
Sbjct: 174 LLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIA 233

Query: 349 GYAQNGCYIQAL 384
           G +QNG Y + L
Sbjct: 234 GCSQNGQYEEGL 245



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
 Frame = +1

Query: 4   VFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSPSE- 180
           VF+ MP +D V+WN +I+        Q +  LF  M   G   +  +L++ L +C   E 
Sbjct: 419 VFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLED 478

Query: 181 ---GREVHSFVLRSGMVSEGN-LSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
               R++H+     G       + N++V MY++   +  A+KAF  +  K LV+W+ ++A
Sbjct: 479 LKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILA 538

Query: 349 GYAQN 363
            YAQ+
Sbjct: 539 AYAQS 543



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
 Frame = +1

Query: 4   VFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSC----S 171
           VF +M     + W  MI+G +Q G  +    +FR M   G   +  + ++ +  C    +
Sbjct: 216 VFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDA 275

Query: 172 PSEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAG 351
             EG  + + +L S   S   L+ +++++Y +   ++ A+     M  +D+V+WNAM+  
Sbjct: 276 VKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTA 335

Query: 352 YAQNG 366
            AQNG
Sbjct: 336 CAQNG 340


>ref|XP_006853296.1| hypothetical protein AMTR_s00032p00029450 [Amborella trichopoda]
           gi|548856949|gb|ERN14763.1| hypothetical protein
           AMTR_s00032p00029450 [Amborella trichopoda]
          Length = 841

 Score =  106 bits (264), Expect = 4e-21
 Identities = 56/137 (40%), Positives = 85/137 (62%), Gaps = 4/137 (2%)
 Frame = +1

Query: 4   VFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSC----S 171
           VFD+M  RD V WN MI+G+A       +F LF++M   G +P+  S  + +SSC    S
Sbjct: 523 VFDRMEERDVVGWNSMIAGFAINALNTKAFSLFKEMQRAGMMPTQFSYASVISSCTTLAS 582

Query: 172 PSEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAG 351
            ++GR++H  ++++G +S+  ++ AI+ MYSK   +E A   F  M  K++VSWN MI G
Sbjct: 583 IAQGRQLHGQIIKAGFLSDIFVNTAIIDMYSKCGNIEGAFHTFSLMPKKNIVSWNEMING 642

Query: 352 YAQNGCYIQALEHYSTM 402
           +AQNGC  +ALE +  M
Sbjct: 643 FAQNGCADKALEIFREM 659



 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 45/137 (32%), Positives = 74/137 (54%), Gaps = 4/137 (2%)
 Frame = +1

Query: 4   VFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSP--- 174
           +FDK+ +    +WN +ISGY +  + + +  LFR+M      P   +L   LSSC     
Sbjct: 422 MFDKLESPSVSSWNTIISGYFKRENYEEAINLFREMQLENTWPDRTTLTIMLSSCGEIGF 481

Query: 175 -SEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAG 351
              G++VHSF L+  + S+  + + ++ MYSK   ++ A+  F  M  +D+V WN+MIAG
Sbjct: 482 LDGGKQVHSFSLKMIVFSDLFVGSGLIDMYSKCGKIDHAKFVFDRMEERDVVGWNSMIAG 541

Query: 352 YAQNGCYIQALEHYSTM 402
           +A N    +A   +  M
Sbjct: 542 FAINALNTKAFSLFKEM 558



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 4/123 (3%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSC---- 168
           Q+F KMP ++TV+WN +I G  + G  Q +   + +M   G  P+  +  + LS+C    
Sbjct: 104 QLFLKMPQKNTVSWNTLIGGLVRSGFDQKALNTYSEMNIEGIKPTHFTFASVLSACGNLQ 163

Query: 169 SPSEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
              +G +VH  ++R G+     + NA+V+MY+K   +  A + F  M   + VS  A+++
Sbjct: 164 DSCKGIQVHGRIVRDGLELNTYVENALVSMYAKSGSMAYALQLFREMKEPNEVSCTAIMS 223

Query: 349 GYA 357
           G A
Sbjct: 224 GLA 226


>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449529868|ref|XP_004171920.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  106 bits (264), Expect = 4e-21
 Identities = 54/143 (37%), Positives = 83/143 (58%), Gaps = 4/143 (2%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSPSE 180
           Q+FD+MP +D V+WN MI+GYAQ G  + +  LF DM      P+  ++V+ LS+C+ S 
Sbjct: 216 QLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSN 275

Query: 181 ----GREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
               G  + S++   G+ S   L NA++ MYSK   +++A + F  ML +D++SWN MI 
Sbjct: 276 ALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIG 335

Query: 349 GYAQNGCYIQALEHYSTMWGSSI 417
           GY     Y +AL  +  M  S +
Sbjct: 336 GYTHMCSYKEALALFREMLASGV 358



 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 48/143 (33%), Positives = 80/143 (55%), Gaps = 4/143 (2%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSP-- 174
           ++FD M  RD ++WNVMI GY    S + +  LFR+M + G  P+  + ++ L SC+   
Sbjct: 317 ELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLG 376

Query: 175 --SEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
               G+ +H+++ ++      +LS +++ +Y+K   + +A + F GM  K L SWNAMI 
Sbjct: 377 AIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMIC 436

Query: 349 GYAQNGCYIQALEHYSTMWGSSI 417
           G A +G   +A E +S M    I
Sbjct: 437 GLAMHGQADKAFELFSKMSSDGI 459



 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
 Frame = +1

Query: 4   VFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSC----S 171
           +F+ +   +   WN MI G +   SP  +   F  M   G  P+S +    L SC    S
Sbjct: 85  LFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLAS 144

Query: 172 PSEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAG 351
             EG+++H+ VL+ G VS+  +  +++ MY++   + +A+  F     +D +S+ A+IAG
Sbjct: 145 AHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAG 204

Query: 352 YAQNGCYIQALEHYSTM 402
           YA  G   +A + +  M
Sbjct: 205 YALWGYMDRARQLFDEM 221


>ref|XP_004292817.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g04860-like [Fragaria vesca subsp. vesca]
          Length = 706

 Score =  105 bits (263), Expect = 5e-21
 Identities = 53/144 (36%), Positives = 84/144 (58%), Gaps = 4/144 (2%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSPSE 180
           ++FD MP RD V+WN +I G ++ G   A+  LF  MC  G+ P   +LV+ + SC   E
Sbjct: 113 KMFDGMPERDDVSWNAVICGVSRNGHHSAALELFVQMCREGFSPGHTTLVSLVPSCGRHE 172

Query: 181 ----GREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
               G+ VH F ++ G+ S+  + NA+ +MY K   +E+AE  F  +++K + SWN MI 
Sbjct: 173 FAFQGKSVHGFGIKGGLDSDSQVQNALTSMYGKCGDLEAAEVLFEEIVYKGVDSWNTMIG 232

Query: 349 GYAQNGCYIQALEHYSTMWGSSIR 420
            Y QNGC+ +A+  +  M   S++
Sbjct: 233 AYGQNGCFDEAMLVFRRMREESVQ 256



 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
 Frame = +1

Query: 4   VFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSPSE- 180
           +F +M  +  + WN +ISG  Q G    +  LF  M   G+ P S ++ + LS C   E 
Sbjct: 411 LFSEMGEKPLITWNSLISGCVQAGRSSDALELFSQMQMSGHSPDSVTISSLLSGCCQLEY 470

Query: 181 ---GREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAG 351
              G  +H++VLR+ +  E  +  A++ MY+K   +E AE  F  +    L +WN+MI+ 
Sbjct: 471 LKFGEGLHTYVLRNNLEGEDFVGTALIDMYTKCGRIEHAEMVFNSIKEPCLATWNSMISA 530

Query: 352 YAQNGCYIQALEHYSTM 402
           Y+  G   +AL  +S M
Sbjct: 531 YSLYGLEHKALVCFSKM 547



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 38/134 (28%), Positives = 70/134 (52%), Gaps = 11/134 (8%)
 Frame = +1

Query: 34  VAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSPS-----------E 180
           V ++ +++ + Q  +P+ +  LFR++      P+  +    L +C+ S           E
Sbjct: 16  VYFHSLLNSHIQTKTPKQALLLFRNLFENNLKPNDLTFSLLLKACTSSSSYLASGNAKLE 75

Query: 181 GREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAGYAQ 360
             ++H+ +L+SG      +  A++ +Y K   V +A+K F GM  +D VSWNA+I G ++
Sbjct: 76  VNQIHTHLLKSGFDRFVYVGTALLDLYMKLGQVRNAQKMFDGMPERDDVSWNAVICGVSR 135

Query: 361 NGCYIQALEHYSTM 402
           NG +  ALE +  M
Sbjct: 136 NGHHSAALELFVQM 149



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
 Frame = +1

Query: 4   VFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCS-PSE 180
           ++  +P +  V+   +IS +A+ G        F D+        + ++V+ L     P+E
Sbjct: 310 LYKSLPHKTLVSLTALISSHAEKGDMSQVMECFADLQQLEMKLDAVAMVSILHGIKHPAE 369

Query: 181 ---GREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAG 351
              G   H + L++G+ ++  + N +++MYS+   +E A   F  M  K L++WN++I+G
Sbjct: 370 FGLGLAFHGYGLKTGLAADSLVVNGLISMYSRFDKIEDAFSLFSEMGEKPLITWNSLISG 429

Query: 352 YAQNGCYIQALEHYSTM 402
             Q G    ALE +S M
Sbjct: 430 CVQAGRSSDALELFSQM 446



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/133 (23%), Positives = 68/133 (51%)
 Frame = +1

Query: 4   VFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSPSEG 183
           +F+++  +   +WN MI  Y Q G    +  +FR M       +  ++V+ LS+   ++ 
Sbjct: 215 LFEEIVYKGVDSWNTMIGAYGQNGCFDEAMLVFRRMREESVQANVVTMVSLLSA--NADP 272

Query: 184 REVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAGYAQN 363
              H   +++G+V+  ++  +++  Y+     E+ E  +  + HK LVS  A+I+ +A+ 
Sbjct: 273 GSTHCHAIKTGLVNNASVITSLICEYATRGYTETGELLYKSLPHKTLVSLTALISSHAEK 332

Query: 364 GCYIQALEHYSTM 402
           G   Q +E ++ +
Sbjct: 333 GDMSQVMECFADL 345


>gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  105 bits (263), Expect = 5e-21
 Identities = 52/144 (36%), Positives = 86/144 (59%), Gaps = 4/144 (2%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSPSE 180
           QVFD+MP RD V+W  ++ GYA CG    SF  F+ M  +G   +  + +  L +CS   
Sbjct: 403 QVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPV 462

Query: 181 ----GREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
               G+E+H+ V+++G+ ++  ++NA+++MY K   VE A +   GM  +D+V+WN +I 
Sbjct: 463 ALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIG 522

Query: 349 GYAQNGCYIQALEHYSTMWGSSIR 420
           G AQNG  ++AL+ +  M    +R
Sbjct: 523 GLAQNGRGLEALQKFEVMKSEEMR 546



 Score =  101 bits (252), Expect = 9e-20
 Identities = 53/144 (36%), Positives = 79/144 (54%), Gaps = 4/144 (2%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSPSE 180
           ++FDK   +  V+WNVMISGYA  G  Q +F LF  M   G  P   + V+ LS+CS   
Sbjct: 100 RLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPA 159

Query: 181 ----GREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
               GREVH  V+ +G+ +   + NA+++MY+K   V  A + F  M  +D VSW  +  
Sbjct: 160 ALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTG 219

Query: 349 GYAQNGCYIQALEHYSTMWGSSIR 420
            YA++G   ++L+ Y  M    +R
Sbjct: 220 AYAESGYAQESLKTYHAMLQEGVR 243



 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 4/137 (2%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSPSE 180
           +VF+ +P RD +AWN MI G    G  + + G+F  M      P   + +  LS+C+   
Sbjct: 302 EVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPG 361

Query: 181 G----REVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
           G    +E+H+  ++ G+VS+    NA++ MYSK   ++ A + F  M  +D+VSW A++ 
Sbjct: 362 GLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVG 421

Query: 349 GYAQNGCYIQALEHYST 399
           GYA  G   Q +E +ST
Sbjct: 422 GYADCG---QVVESFST 435



 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSP-- 174
           +VFD M +RD V+W  +   YA+ G  Q S   +  M   G  PS  + +  LS+C    
Sbjct: 201 RVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLA 260

Query: 175 --SEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
              +G+++H+ ++ S   S+  +S A+  MY K   V+ A + F  + ++D+++WN MI 
Sbjct: 261 ALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIG 320

Query: 349 GYAQNG 366
           G   +G
Sbjct: 321 GLVDSG 326


>gb|EXC12414.1| hypothetical protein L484_001796 [Morus notabilis]
          Length = 694

 Score =  105 bits (262), Expect = 6e-21
 Identities = 54/144 (37%), Positives = 85/144 (59%), Gaps = 4/144 (2%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSP-- 174
           Q+FD++P RD   WN +IS Y Q G P+    LF  M   G+ PSS +LV A+SSC+   
Sbjct: 162 QLFDEIPERDVACWNAVISCYYQHGKPEKVMELFEKMKILGFEPSSVTLVVAISSCARLL 221

Query: 175 --SEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
               G+E+H   + +G++S+G + +++V MY K  C+E A++ F  +L K+ V+WN++IA
Sbjct: 222 DLERGKEIHKEAIEAGLLSDGFVRSSLVDMYGKCGCLEMAKEVFEKILRKNTVAWNSIIA 281

Query: 349 GYAQNGCYIQALEHYSTMWGSSIR 420
           GY+  G     ++    M G   R
Sbjct: 282 GYSLKGDSKSCIKLLERMSGEGTR 305



 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 45/138 (32%), Positives = 80/138 (57%), Gaps = 4/138 (2%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSPS- 177
           +VF+K+  ++TVAWN +I+GY+  G  ++   L   M   G  P+  +  + L +C  S 
Sbjct: 263 EVFEKILRKNTVAWNSIIAGYSLKGDSKSCIKLLERMSGEGTRPTLTTFGSILLACRRSL 322

Query: 178 ---EGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
              +G+ +H++++R+ + ++  ++N ++ +Y K   V SA+  F  +   D+VSWN MI+
Sbjct: 323 QLRQGKFIHAYIVRNNVQADIYINNLLIDLYFKCGIVSSAKNVFEKIPKADIVSWNLMIS 382

Query: 349 GYAQNGCYIQALEHYSTM 402
           GY   G Y +AL  Y TM
Sbjct: 383 GYVTVGKYFEALGMYDTM 400



 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 44/137 (32%), Positives = 77/137 (56%), Gaps = 4/137 (2%)
 Frame = +1

Query: 4   VFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSP--- 174
           VF+K+P  D V+WN+MISGY   G    + G++  M   G  P S +  + LS+CS    
Sbjct: 365 VFEKIPKADIVSWNLMISGYVTVGKYFEALGMYDTMKEVGLRPDSITFTSLLSACSQLAA 424

Query: 175 -SEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAG 351
             +G+E+H  +++  + ++  L  A++ MY+K   V+ A + F  +  +DLVSW +MI  
Sbjct: 425 LEKGKEIHRSIMQDKIENDEVLMGALLDMYAKCGAVDEAIEVFHRLPTRDLVSWTSMIIA 484

Query: 352 YAQNGCYIQALEHYSTM 402
           +  +G  ++A + +  M
Sbjct: 485 FGSHGRALEAQKLFCEM 501



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/130 (26%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
 Frame = +1

Query: 28  DTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYV-PSSGSLVTALSSCSPS----EGREV 192
           D   WN +++ Y +      +  LF  +     + P S +  + L +C        G  V
Sbjct: 69  DISLWNGLLAAYTKNSMFIEALDLFGRLLHYPCLNPDSYTYPSVLKACGEMGTIRSGEVV 128

Query: 193 HSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAGYAQNGCY 372
           H+ ++++G +S+  +S+++VTMY+K +  +SA + F  +  +D+  WNA+I+ Y Q+G  
Sbjct: 129 HTHLVKTGFLSDVFISSSLVTMYAKCNASKSANQLFDEIPERDVACWNAVISCYYQHGKP 188

Query: 373 IQALEHYSTM 402
            + +E +  M
Sbjct: 189 EKVMELFEKM 198


>gb|ESW11951.1| hypothetical protein PHAVU_008G072900g [Phaseolus vulgaris]
          Length = 811

 Score =  105 bits (262), Expect = 6e-21
 Identities = 52/137 (37%), Positives = 84/137 (61%), Gaps = 4/137 (2%)
 Frame = +1

Query: 4   VFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSPSE- 180
           VF+KM  +D ++W  +++GYAQ GS + S  +FRDM   G  P    + + LS+C+    
Sbjct: 395 VFEKMVEKDVISWTSLVTGYAQNGSHEESLKIFRDMRIAGVNPDQFIVASILSACAELTL 454

Query: 181 ---GREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAG 351
              G++VHS  ++SG+ S  ++ N++VTMY+K  C++ A+  F  M  +D+++W A+I G
Sbjct: 455 LEFGKQVHSDFIKSGLRSSLSVDNSLVTMYAKCGCLDDADAIFVSMHVRDVITWTALIVG 514

Query: 352 YAQNGCYIQALEHYSTM 402
           YAQNG    +L  Y  M
Sbjct: 515 YAQNGKGRHSLRFYDAM 531



 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 44/145 (30%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSP-- 174
           ++ +   +R ++ W+ +ISGY + G    +FGLFR M   G  PS  +L + L  CS   
Sbjct: 91  ELLNGFSSRSSITWSSLISGYCRFGCEAETFGLFRSMRLEGQKPSQYTLGSILRLCSTLC 150

Query: 175 --SEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHK--DLVSWNAM 342
               G+ +H +V+++G  S   +   +V MY+K   +  AE  F G+     + V W  M
Sbjct: 151 LIQNGKMIHGYVVKNGFESNVYVVTGLVDMYAKCSHISEAEILFKGLAFDKGNHVLWTTM 210

Query: 343 IAGYAQNGCYIQALEHYSTMWGSSI 417
           + GY+QNG  ++A+E +  M    +
Sbjct: 211 VTGYSQNGDGLKAIEFFRYMHAEGV 235



 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 43/136 (31%), Positives = 74/136 (54%), Gaps = 2/136 (1%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSC--SP 174
           +V + M   D V+WN MI G  + G  + +  LF+ M +R       +  + L+ C    
Sbjct: 295 RVLENMDDDDVVSWNSMIVGCVRHGFEEEALLLFKKMHARNMKIDDYTFPSVLNCCIIGS 354

Query: 175 SEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAGY 354
            + + VH  V+++G  +   +SNAIV MY+K   +  A   F  M+ KD++SW +++ GY
Sbjct: 355 IDAKSVHCLVIKTGFENYKLVSNAIVDMYAKTGELNCAYAVFEKMVEKDVISWTSLVTGY 414

Query: 355 AQNGCYIQALEHYSTM 402
           AQNG + ++L+ +  M
Sbjct: 415 AQNGSHEESLKIFRDM 430



 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
 Frame = +1

Query: 34  VAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSPSE----GREVHSF 201
           V W  M++GY+Q G    +   FR M + G   +  +  + L++CS       G +VH  
Sbjct: 205 VLWTTMVTGYSQNGDGLKAIEFFRYMHAEGVESNQFTFPSILTACSAVSAHRFGEQVHGC 264

Query: 202 VLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAGYAQNGCYIQA 381
           ++R G      + +A+V MY+K   + SA++    M   D+VSWN+MI G  ++G   +A
Sbjct: 265 IVRYGFGCNVYVQSALVDMYAKCGDLSSAKRVLENMDDDDVVSWNSMIVGCVRHGFEEEA 324

Query: 382 LEHYSTMWGSSIR 420
           L  +  M   +++
Sbjct: 325 LLLFKKMHARNMK 337


>ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g11290 gi|332190592|gb|AEE28713.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  105 bits (262), Expect = 6e-21
 Identities = 51/125 (40%), Positives = 80/125 (64%), Gaps = 4/125 (3%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSP-- 174
           +VFD+MP RD V+WN +++GY+Q G  + +  + + MC     PS  ++V+ L + S   
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR 250

Query: 175 --SEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
             S G+E+H + +RSG  S  N+S A+V MY+K   +E+A + F GML +++VSWN+MI 
Sbjct: 251 LISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMID 310

Query: 349 GYAQN 363
            Y QN
Sbjct: 311 AYVQN 315



 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 50/144 (34%), Positives = 82/144 (56%), Gaps = 4/144 (2%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSP-- 174
           Q+FD M  R+ V+WN MI  Y Q  +P+ +  +F+ M   G  P+  S++ AL +C+   
Sbjct: 292 QLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLG 351

Query: 175 --SEGREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
               GR +H   +  G+    ++ N++++MY K   V++A   F  +  + LVSWNAMI 
Sbjct: 352 DLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMIL 411

Query: 349 GYAQNGCYIQALEHYSTMWGSSIR 420
           G+AQNG  I AL ++S M   +++
Sbjct: 412 GFAQNGRPIDALNYFSQMRSRTVK 435



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 47/143 (32%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
 Frame = +1

Query: 4   VFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSG---SLVTALSSCSP 174
           +F K+ +R  V+WN MI G+AQ G P  +   F  M SR   P +    S++TA++  S 
Sbjct: 394 MFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSI 453

Query: 175 SE-GREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIAG 351
           +   + +H  V+RS +     ++ A+V MY+K   +  A   F  M  + + +WNAMI G
Sbjct: 454 THHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDG 513

Query: 352 YAQNGCYIQALEHYSTMWGSSIR 420
           Y  +G    ALE +  M   +I+
Sbjct: 514 YGTHGFGKAALELFEEMQKGTIK 536



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 4/144 (2%)
 Frame = +1

Query: 1   QVFDKMPTRDTVAWNVMISGYAQCGSPQASFGLFRDMCSRGYVPSSGSLVTALSSCSPSE 180
           +VF+ + ++  V ++ M+ G+A+      +   F  M      P   +    L  C    
Sbjct: 90  RVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEA 149

Query: 181 ----GREVHSFVLRSGMVSEGNLSNAIVTMYSKHHCVESAEKAFCGMLHKDLVSWNAMIA 348
               G+E+H  +++SG   +      +  MY+K   V  A K F  M  +DLVSWN ++A
Sbjct: 150 ELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVA 209

Query: 349 GYAQNGCYIQALEHYSTMWGSSIR 420
           GY+QNG    ALE   +M   +++
Sbjct: 210 GYSQNGMARMALEMVKSMCEENLK 233