BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00025144
         (585 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vul...    50   4e-12
ref|XP_002307225.1| predicted protein [Populus trichocarpa]            57   5e-11
gb|ABD63151.1| hypothetical protein 20.t00003 [Asparagus officin...    59   7e-07

>gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vulgaris]
          Length = 324

 Score = 50.4 bits (119), Expect(2) = 4e-12
 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
 Frame = -2

Query: 539 ALEDHKYDGMEVKDWKLLNMRACGNFRSCLSQRIEY--KM*TSS--IWKKLRNSQIK--- 381
           A+E  K   +E KDW ++N  ACG  RSCLS+  +Y  K  TS+  +WK L +  +K   
Sbjct: 18  AIEGEKPKEVEEKDWSIINRLACGTIRSCLSREQKYVVKNETSAHKLWKALEDKFLKKSG 77

Query: 380 --KLHLMKKLFRMN-MSGAVSNNNTSM 309
             KL + K+LFR +   G   N + +M
Sbjct: 78  QNKLLMKKRLFRFDYQQGTTMNAHITM 104



 Score = 46.6 bits (109), Expect(2) = 4e-12
 Identities = 29/100 (29%), Positives = 48/100 (48%)
 Frame = -1

Query: 318 HFDEFNKLLEDLLNLDQDVLENYKVLCLFEFPSR*V*EFVTTLLNGKENLMYNEIESTLQ 139
           H   FN+L+  LLNLD    +    L L            TTLL+GK+N+  + + S L 
Sbjct: 101 HITMFNQLVAYLLNLDVKFEDEDLALMLVSSLPDEFEHLETTLLHGKDNVSLDVVCSALY 160

Query: 138 HYDFRKTDRKANKEVVSSDSLFVQGRKREKWSFKEGIMAS 19
            ++ RK D+   K   S ++L  +G ++ +   + G+  S
Sbjct: 161 SHELRKQDKMKTKSTTSEEALVTRGGQQSQTKERRGMCKS 200


>ref|XP_002307225.1| predicted protein [Populus trichocarpa]
          Length = 279

 Score = 56.6 bits (135), Expect(2) = 5e-11
 Identities = 32/91 (35%), Positives = 53/91 (58%)
 Frame = -1

Query: 321 QHFDEFNKLLEDLLNLDQDVLENYKVLCLFEFPSR*V*EFVTTLLNGKENLMYNEIESTL 142
           +H ++FNK+  DL NLD ++ +  K L L           VTTLL GKE + + ++ + L
Sbjct: 138 EHLNDFNKMTADLKNLDVEIDDEDKALLLLNSLPDIYEHLVTTLLYGKEKIKFIDVSNAL 197

Query: 141 QHYDFRKTDRKANKEVVSSDSLFVQGRKREK 49
            + ++RK D+  +KE  +S++L V+GR   K
Sbjct: 198 VNNEYRKKDQIVHKE-STSEALTVRGRTNPK 227



 Score = 36.6 bits (83), Expect(2) = 5e-11
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
 Frame = -2

Query: 551 NQQDALEDHKYDGMEVKDWKLLNMRACGNFRSCLSQRIEY----KM*TSSIWKKLRNSQI 384
           N    LED K + ++ K W+ +N  AC + R CL +  +Y    +     +W+ L +  +
Sbjct: 53  NLDFTLED-KPEDLDDKSWERINWLACSSIRLCLVKDQKYTFSEQNSAKKLWQALEDKFM 111

Query: 383 KK-----LHLMKKLFRMNMSGAVSNN 321
           KK     L+L K++FR       S N
Sbjct: 112 KKSIENRLYLKKRIFRFQHKKGTSMN 137


>gb|ABD63151.1| hypothetical protein 20.t00003 [Asparagus officinalis]
          Length = 1011

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
 Frame = -1

Query: 318  HFDEFNKLLEDLLNLDQDVLENYKVLCLF-EFPSR*V*EFVTTLLNGKENLMYNEIESTL 142
            + + + KLL +L N+D+ + + YK + L    P      F+ TLLNG+ ++ Y+EI + L
Sbjct: 902  YVNNYTKLLSNLANVDEKISDEYKTIILLGSLPDEEYDTFLLTLLNGRPSISYSEITNAL 961

Query: 141  QHYDFRKTDRKANKEVVSSDSLFVQGR 61
             +YD R+ D++ +    S ++L  +GR
Sbjct: 962  TNYDLRRKDKETSHASTSGEALSTRGR 988