BLASTX nr result

ID: Ephedra28_contig00025143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00025143
         (382 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_193408.1| ethylene-responsive transcription factor ERF039...    58   2e-06
ref|XP_002868104.1| hypothetical protein ARALYDRAFT_493200 [Arab...    58   2e-06
ref|XP_006282732.1| hypothetical protein CARUB_v10005867mg [Caps...    55   7e-06

>ref|NP_193408.1| ethylene-responsive transcription factor ERF039 [Arabidopsis
           thaliana] gi|75337675|sp|Q9SUK8.1|ERF39_ARATH RecName:
           Full=Ethylene-responsive transcription factor ERF039
           gi|5302798|emb|CAB46040.1| apetala2 domain TINY like
           protein [Arabidopsis thaliana]
           gi|7268425|emb|CAB78717.1| apetala2 domain TINY like
           protein [Arabidopsis thaliana]
           gi|44021914|gb|AAS46629.1| At4g16750 [Arabidopsis
           thaliana] gi|48479340|gb|AAT44941.1| putative AP2/EREBP
           transcription factor [Arabidopsis thaliana]
           gi|58652080|gb|AAW80865.1| At4g16750 [Arabidopsis
           thaliana] gi|332658397|gb|AEE83797.1|
           ethylene-responsive transcription factor ERF039
           [Arabidopsis thaliana]
          Length = 179

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 42/103 (40%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
 Frame = -1

Query: 382 MAARAHDAATFFFKGGSAKLNFPNDASTLPKPSSNCTRDIKXXXXXXAF----GEKFGDT 215
           MAARAHD A    KGGSA LNFP  A  LP+P+S   +DI+      A       +   +
Sbjct: 74  MAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQEAAAAAAAVDWKAPESPSS 133

Query: 214 TKSASFVNNADYSDLNDLDEFSLVDCNINDGFYPYYCSPFMDP 86
           T ++S V +  +SDL DL    + D N NDGF+  +  P+ DP
Sbjct: 134 TVTSSPVADDAFSDLPDL-LLDVNDHNKNDGFWDSF--PYEDP 173


>ref|XP_002868104.1| hypothetical protein ARALYDRAFT_493200 [Arabidopsis lyrata subsp.
           lyrata] gi|297313940|gb|EFH44363.1| hypothetical protein
           ARALYDRAFT_493200 [Arabidopsis lyrata subsp. lyrata]
          Length = 179

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 42/103 (40%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
 Frame = -1

Query: 382 MAARAHDAATFFFKGGSAKLNFPNDASTLPKPSSNCTRDIKXXXXXXAF----GEKFGDT 215
           MAARAHD A    KGGSA LNFP  A  LP+P+S   +DI+      A       +   +
Sbjct: 74  MAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQEAAAAAAAVDWKAPESPSS 133

Query: 214 TKSASFVNNADYSDLNDLDEFSLVDCNINDGFYPYYCSPFMDP 86
           T ++S V +  +SDL DL    + D N NDGF+  +  P+ DP
Sbjct: 134 TVTSSPVADDAFSDLPDL-LLDVNDHNKNDGFWDSF--PYEDP 173


>ref|XP_006282732.1| hypothetical protein CARUB_v10005867mg [Capsella rubella]
           gi|482551437|gb|EOA15630.1| hypothetical protein
           CARUB_v10005867mg [Capsella rubella]
          Length = 176

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
 Frame = -1

Query: 382 MAARAHDAATFFFKGGSAKLNFPNDASTLPKPSSNCTRDIKXXXXXXAFGE----KFGDT 215
           MAARAHD A    KGGSA LNFP  A  LP+P+S   +DI+      A  +    +   +
Sbjct: 71  MAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQEAAAAAAAADWKAPESPSS 130

Query: 214 TKSASFVNNADYSDLNDLDEFSLVDCNINDGFYPYYCSPFMDP 86
           T ++S V +  +SDL DL    + D N  DGF+  +  P+ DP
Sbjct: 131 TVTSSPVADDAFSDLPDL-LLDVNDHNKVDGFWDSF--PYEDP 170


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