BLASTX nr result

ID: Ephedra28_contig00025119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00025119
         (843 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006849811.1| hypothetical protein AMTR_s00176p00064210 [A...    59   2e-06
ref|XP_006386378.1| hypothetical protein POPTR_0002s08690g [Popu...    59   3e-06
ref|XP_002302251.2| hypothetical protein POPTR_0002s08690g [Popu...    59   3e-06
ref|XP_004160827.1| PREDICTED: LOW QUALITY PROTEIN: DIS3-like ex...    57   8e-06
ref|XP_004140974.1| PREDICTED: DIS3-like exonuclease 2-like [Cuc...    57   8e-06

>ref|XP_006849811.1| hypothetical protein AMTR_s00176p00064210 [Amborella trichopoda]
            gi|548853388|gb|ERN11392.1| hypothetical protein
            AMTR_s00176p00064210 [Amborella trichopoda]
          Length = 1165

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 38/85 (44%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
 Frame = +3

Query: 60   KSEDCSESLQNLEVE----TREDFLGNMLDGDLEHDNIHP-YSIEPAVFPLILGPLSTVP 224
            K+ D SE     EV     T E   G+ L  +  +  +    +++PAVFPL L  LSTVP
Sbjct: 1080 KTSDLSEPTSEQEVRDENITHEATPGSCLVVNPYNKQVRQNQAVDPAVFPLTLQYLSTVP 1139

Query: 225  VSLYAVGGEKEPPDVSVRLFASSYL 299
            VS+ AVGGE+   D++VRL+ASSYL
Sbjct: 1140 VSVNAVGGERSRMDIAVRLYASSYL 1164


>ref|XP_006386378.1| hypothetical protein POPTR_0002s08690g [Populus trichocarpa]
            gi|550344578|gb|ERP64175.1| hypothetical protein
            POPTR_0002s08690g [Populus trichocarpa]
          Length = 1099

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 27/48 (56%), Positives = 36/48 (75%)
 Frame = +3

Query: 153  DNIHPYSIEPAVFPLILGPLSTVPVSLYAVGGEKEPPDVSVRLFASSY 296
            D I    I+P+VFPL +  LST+PV+L+A+GG+  PPD+ VRLF SSY
Sbjct: 1050 DAILKSEIDPSVFPLTVRLLSTIPVALHAIGGDDGPPDIGVRLFMSSY 1097


>ref|XP_002302251.2| hypothetical protein POPTR_0002s08690g [Populus trichocarpa]
            gi|550344577|gb|EEE81524.2| hypothetical protein
            POPTR_0002s08690g [Populus trichocarpa]
          Length = 1083

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 27/48 (56%), Positives = 36/48 (75%)
 Frame = +3

Query: 153  DNIHPYSIEPAVFPLILGPLSTVPVSLYAVGGEKEPPDVSVRLFASSY 296
            D I    I+P+VFPL +  LST+PV+L+A+GG+  PPD+ VRLF SSY
Sbjct: 1034 DAILKSEIDPSVFPLTVRLLSTIPVALHAIGGDDGPPDIGVRLFMSSY 1081


>ref|XP_004160827.1| PREDICTED: LOW QUALITY PROTEIN: DIS3-like exonuclease 2-like [Cucumis
            sativus]
          Length = 1159

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 25/43 (58%), Positives = 35/43 (81%)
 Frame = +3

Query: 174  IEPAVFPLILGPLSTVPVSLYAVGGEKEPPDVSVRLFASSYLR 302
            ++PA+FPL +  LST+PV+L+AVGG+  P D+ VRL+ SSYLR
Sbjct: 1117 VDPAIFPLTVRLLSTIPVALHAVGGDDGPIDIGVRLYMSSYLR 1159


>ref|XP_004140974.1| PREDICTED: DIS3-like exonuclease 2-like [Cucumis sativus]
          Length = 1125

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 25/43 (58%), Positives = 35/43 (81%)
 Frame = +3

Query: 174  IEPAVFPLILGPLSTVPVSLYAVGGEKEPPDVSVRLFASSYLR 302
            ++PA+FPL +  LST+PV+L+AVGG+  P D+ VRL+ SSYLR
Sbjct: 1083 VDPAIFPLTVRLLSTIPVALHAVGGDDGPIDIGVRLYMSSYLR 1125


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