BLASTX nr result
ID: Ephedra28_contig00025079
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00025079
(535 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK23197.1| unknown [Picea sitchensis] gi|148906984|gb|ABR166... 123 3e-26
gb|EOY16180.1| Ribosomal protein S13/S18 family [Theobroma cacao] 119 4e-25
gb|ACA58360.1| 30S ribosomal protein S13-1 [Arachis diogoi] gi|1... 117 1e-24
ref|XP_002306609.2| hypothetical protein POPTR_0005s16160g [Popu... 117 2e-24
ref|XP_004140327.1| PREDICTED: 30S ribosomal protein S13, chloro... 117 2e-24
ref|XP_002285833.1| PREDICTED: 30S ribosomal protein S13, chloro... 117 2e-24
gb|AFK44070.1| unknown [Lotus japonicus] 116 3e-24
gb|EMJ27157.1| hypothetical protein PRUPE_ppa012483mg [Prunus pe... 116 4e-24
gb|EPS72074.1| hypothetical protein M569_02688 [Genlisea aurea] 115 5e-24
ref|XP_002513824.1| 30S ribosomal protein S13, putative [Ricinus... 115 5e-24
gb|AFK45217.1| unknown [Lotus japonicus] 115 8e-24
gb|EXB44329.1| 30S ribosomal protein S13 [Morus notabilis] 114 1e-23
ref|XP_006434118.1| hypothetical protein CICLE_v10002692mg [Citr... 114 1e-23
gb|AEC10995.1| 30S ribosomal protein s13 [Camellia sinensis] 114 1e-23
ref|XP_004290827.1| PREDICTED: 30S ribosomal protein S13, chloro... 114 1e-23
ref|XP_003601110.1| 30S ribosomal protein S13 [Medicago truncatu... 114 1e-23
ref|XP_002302256.1| hypothetical protein POPTR_0002s08900g [Popu... 113 2e-23
gb|ADP02222.1| putative 30S ribosomal protein S13 [Triticum aest... 113 3e-23
ref|XP_003560713.1| PREDICTED: 30S ribosomal protein S13, chloro... 113 3e-23
ref|XP_004986289.1| PREDICTED: 30S ribosomal protein S13, chloro... 112 4e-23
>gb|ABK23197.1| unknown [Picea sitchensis] gi|148906984|gb|ABR16636.1| unknown
[Picea sitchensis] gi|224284072|gb|ACN39773.1| unknown
[Picea sitchensis]
Length = 169
Score = 123 bits (308), Expect = 3e-26
Identities = 58/91 (63%), Positives = 73/91 (80%)
Frame = +1
Query: 1 SRKILLDLGIENKHTRDLNRDELIKIRKEVSEYMIEGDLRRFNEQNIRREIEIKSYRGRR 180
+R++L DLG+ENK TR+LN EL ++R EVS+YMIEGDLRRFN IRR IEI+ YRGRR
Sbjct: 76 ARQVLYDLGMENKVTRELNESELTRVRDEVSKYMIEGDLRRFNNLAIRRLIEIQCYRGRR 135
Query: 181 HLLGLPCRGQKTRTNARTLKGKRSAVIRTRK 273
H+ GLPCRGQ+T+ N RTLKGKR ++ +K
Sbjct: 136 HVAGLPCRGQRTKNNCRTLKGKRVSIAGKKK 166
>gb|EOY16180.1| Ribosomal protein S13/S18 family [Theobroma cacao]
Length = 168
Score = 119 bits (298), Expect = 4e-25
Identities = 60/91 (65%), Positives = 71/91 (78%)
Frame = +1
Query: 1 SRKILLDLGIENKHTRDLNRDELIKIRKEVSEYMIEGDLRRFNEQNIRREIEIKSYRGRR 180
+RKIL DL +ENK T+DL+ +ELI IR EVS+YMIEGDLRRFN NIRR EI+ YRG R
Sbjct: 75 ARKILCDLKMENKITKDLSEEELITIRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGVR 134
Query: 181 HLLGLPCRGQKTRTNARTLKGKRSAVIRTRK 273
H+ GLPCRGQ+T+ N RTLKGKR V +K
Sbjct: 135 HIQGLPCRGQRTKNNTRTLKGKRVTVAGKKK 165
>gb|ACA58360.1| 30S ribosomal protein S13-1 [Arachis diogoi]
gi|169635172|gb|ACA58361.1| 30S ribosomal protein S13-2
[Arachis diogoi]
Length = 121
Score = 117 bits (294), Expect = 1e-24
Identities = 56/92 (60%), Positives = 73/92 (79%)
Frame = +1
Query: 1 SRKILLDLGIENKHTRDLNRDELIKIRKEVSEYMIEGDLRRFNEQNIRREIEIKSYRGRR 180
+RKIL D+ ++NK T+DL+ +ELI +R EVS+Y+IEGDLRRFN NIRR EI+ YRG R
Sbjct: 30 ARKILCDISMDNKVTKDLSEEELITLRDEVSKYVIEGDLRRFNALNIRRLKEIQCYRGIR 89
Query: 181 HLLGLPCRGQKTRTNARTLKGKRSAVIRTRKK 276
H+ GLPCRGQ+T+ N RTLKGK+ A+ +KK
Sbjct: 90 HIQGLPCRGQRTKNNCRTLKGKKVAIAGKKKK 121
>ref|XP_002306609.2| hypothetical protein POPTR_0005s16160g [Populus trichocarpa]
gi|550339105|gb|EEE93605.2| hypothetical protein
POPTR_0005s16160g [Populus trichocarpa]
Length = 168
Score = 117 bits (293), Expect = 2e-24
Identities = 58/91 (63%), Positives = 72/91 (79%)
Frame = +1
Query: 1 SRKILLDLGIENKHTRDLNRDELIKIRKEVSEYMIEGDLRRFNEQNIRREIEIKSYRGRR 180
+R+IL DL +ENK T+DL+ DELI +R EVS+YMIEGDLRRFN NIRR EI+ YRG R
Sbjct: 75 ARQILSDLTMENKITKDLSEDELITLRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGVR 134
Query: 181 HLLGLPCRGQKTRTNARTLKGKRSAVIRTRK 273
H+ GLPCRGQ+T+ N RTLKGKR ++ +K
Sbjct: 135 HIQGLPCRGQRTKNNCRTLKGKRVSIPGKKK 165
>ref|XP_004140327.1| PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Cucumis
sativus] gi|449518817|ref|XP_004166432.1| PREDICTED: 30S
ribosomal protein S13, chloroplastic-like [Cucumis
sativus]
Length = 167
Score = 117 bits (293), Expect = 2e-24
Identities = 57/91 (62%), Positives = 71/91 (78%)
Frame = +1
Query: 1 SRKILLDLGIENKHTRDLNRDELIKIRKEVSEYMIEGDLRRFNEQNIRREIEIKSYRGRR 180
++KIL DL +ENK T+DL+ +ELI IR EVS+YMIEGDLRRFN IRR EI+ YRG R
Sbjct: 74 AKKILFDLNVENKITKDLSEEELISIRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIR 133
Query: 181 HLLGLPCRGQKTRTNARTLKGKRSAVIRTRK 273
H+ GLPCRGQ+T+ N RTLKGK+ A+ +K
Sbjct: 134 HIQGLPCRGQRTKNNCRTLKGKKIAIAGKKK 164
>ref|XP_002285833.1| PREDICTED: 30S ribosomal protein S13, chloroplastic [Vitis
vinifera] gi|302141873|emb|CBI19076.3| unnamed protein
product [Vitis vinifera]
Length = 167
Score = 117 bits (292), Expect = 2e-24
Identities = 57/91 (62%), Positives = 72/91 (79%)
Frame = +1
Query: 1 SRKILLDLGIENKHTRDLNRDELIKIRKEVSEYMIEGDLRRFNEQNIRREIEIKSYRGRR 180
S++IL DLG+ENK T+DL+ +ELI +R EVS+YMIEGDLRRFN IRR EI+ YRG R
Sbjct: 75 SKQILCDLGMENKITKDLSEEELITLRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIR 134
Query: 181 HLLGLPCRGQKTRTNARTLKGKRSAVIRTRK 273
H+ GLPCRGQ+T+ N RTLKGKR ++ +K
Sbjct: 135 HIQGLPCRGQRTKNNCRTLKGKRVSIAGKKK 165
>gb|AFK44070.1| unknown [Lotus japonicus]
Length = 164
Score = 116 bits (291), Expect = 3e-24
Identities = 55/92 (59%), Positives = 73/92 (79%)
Frame = +1
Query: 1 SRKILLDLGIENKHTRDLNRDELIKIRKEVSEYMIEGDLRRFNEQNIRREIEIKSYRGRR 180
+RKIL DL ++NK T++L+ +ELI +R EVS+YMIEGDLRRFN NI+R +I+ YRG R
Sbjct: 73 ARKILCDLNMDNKITKELSEEELITLRDEVSKYMIEGDLRRFNATNIKRLKDIQCYRGIR 132
Query: 181 HLLGLPCRGQKTRTNARTLKGKRSAVIRTRKK 276
H+ GLPCRGQ+T+ N RTLKGK+ A+ +KK
Sbjct: 133 HIQGLPCRGQRTKNNCRTLKGKKVAIAGKKKK 164
>gb|EMJ27157.1| hypothetical protein PRUPE_ppa012483mg [Prunus persica]
Length = 167
Score = 116 bits (290), Expect = 4e-24
Identities = 58/91 (63%), Positives = 70/91 (76%)
Frame = +1
Query: 1 SRKILLDLGIENKHTRDLNRDELIKIRKEVSEYMIEGDLRRFNEQNIRREIEIKSYRGRR 180
+R IL+DL +ENK T+DL+ +EL IR EVS+YMIEGDLRRFN NIRR EI+ YRG R
Sbjct: 75 ARTILIDLNMENKITKDLSEEELTIIRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGIR 134
Query: 181 HLLGLPCRGQKTRTNARTLKGKRSAVIRTRK 273
H+ GLPCRGQ+T+ N RTLKGKR V +K
Sbjct: 135 HIQGLPCRGQRTKNNTRTLKGKRVTVAGKKK 165
>gb|EPS72074.1| hypothetical protein M569_02688 [Genlisea aurea]
Length = 158
Score = 115 bits (289), Expect = 5e-24
Identities = 57/92 (61%), Positives = 71/92 (77%)
Frame = +1
Query: 1 SRKILLDLGIENKHTRDLNRDELIKIRKEVSEYMIEGDLRRFNEQNIRREIEIKSYRGRR 180
SR+IL DL ++NK T+DL+ +EL +R EVS+YMIEGDLRRFN IRR EI+ YRG R
Sbjct: 67 SRQILNDLNLDNKLTKDLSEEELTSLRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGMR 126
Query: 181 HLLGLPCRGQKTRTNARTLKGKRSAVIRTRKK 276
H+ GLPCRGQ+T+ N RTLKGKR A+ +KK
Sbjct: 127 HIQGLPCRGQRTKNNCRTLKGKRVAIPGKKKK 158
>ref|XP_002513824.1| 30S ribosomal protein S13, putative [Ricinus communis]
gi|223546910|gb|EEF48407.1| 30S ribosomal protein S13,
putative [Ricinus communis]
Length = 290
Score = 115 bits (289), Expect = 5e-24
Identities = 57/91 (62%), Positives = 71/91 (78%)
Frame = +1
Query: 1 SRKILLDLGIENKHTRDLNRDELIKIRKEVSEYMIEGDLRRFNEQNIRREIEIKSYRGRR 180
+R+IL DL +ENK T++L+ +ELI +R EVS+YMIEGDLRRFN NIRR EI+ YRG R
Sbjct: 197 ARQILSDLSMENKITKELSEEELITLRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGVR 256
Query: 181 HLLGLPCRGQKTRTNARTLKGKRSAVIRTRK 273
H+ GLPCRGQ+T+ N RTLKGKR V +K
Sbjct: 257 HIQGLPCRGQRTKNNCRTLKGKRVTVAGKKK 287
Score = 83.6 bits (205), Expect = 3e-14
Identities = 43/84 (51%), Positives = 57/84 (67%)
Frame = +1
Query: 1 SRKILLDLGIENKHTRDLNRDELIKIRKEVSEYMIEGDLRRFNEQNIRREIEIKSYRGRR 180
+ +IL+DL +ENK T+DL EL +R EVS+Y+I +L R +I+R +I+ YRG
Sbjct: 64 AHQILIDLSLENKRTKDLTGLELHTLRNEVSKYLIGEELTRCVRSDIQRLADIQCYRGYN 123
Query: 181 HLLGLPCRGQKTRTNARTLKGKRS 252
H LPCRGQ TRTNART KG R+
Sbjct: 124 HACLLPCRGQLTRTNARTRKGMRT 147
>gb|AFK45217.1| unknown [Lotus japonicus]
Length = 164
Score = 115 bits (287), Expect = 8e-24
Identities = 54/92 (58%), Positives = 73/92 (79%)
Frame = +1
Query: 1 SRKILLDLGIENKHTRDLNRDELIKIRKEVSEYMIEGDLRRFNEQNIRREIEIKSYRGRR 180
+RKIL DL ++NK T++L+ +ELI +R EVS+YMIEGDL+RFN NI+R +I+ YRG R
Sbjct: 73 ARKILCDLNMDNKITKELSEEELITLRDEVSKYMIEGDLQRFNATNIKRLKDIQCYRGIR 132
Query: 181 HLLGLPCRGQKTRTNARTLKGKRSAVIRTRKK 276
H+ GLPCRGQ+T+ N RTLKGK+ A+ +KK
Sbjct: 133 HIQGLPCRGQRTKNNCRTLKGKKVAIAGKKKK 164
>gb|EXB44329.1| 30S ribosomal protein S13 [Morus notabilis]
Length = 168
Score = 114 bits (286), Expect = 1e-23
Identities = 57/91 (62%), Positives = 70/91 (76%)
Frame = +1
Query: 1 SRKILLDLGIENKHTRDLNRDELIKIRKEVSEYMIEGDLRRFNEQNIRREIEIKSYRGRR 180
+RKIL DL +ENK T+D + DELI +R EVS+YMIEGDLRRFN IRR EI+ YRG R
Sbjct: 75 ARKILNDLSMENKLTKDFSEDELIILRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGVR 134
Query: 181 HLLGLPCRGQKTRTNARTLKGKRSAVIRTRK 273
H+ GLPCRGQ+T+ N RTLKGK+ A+ +K
Sbjct: 135 HIKGLPCRGQRTKNNCRTLKGKKVAIAGKKK 165
>ref|XP_006434118.1| hypothetical protein CICLE_v10002692mg [Citrus clementina]
gi|568837402|ref|XP_006472713.1| PREDICTED: 30S
ribosomal protein S13, chloroplastic-like [Citrus
sinensis] gi|557536240|gb|ESR47358.1| hypothetical
protein CICLE_v10002692mg [Citrus clementina]
Length = 169
Score = 114 bits (286), Expect = 1e-23
Identities = 57/91 (62%), Positives = 71/91 (78%)
Frame = +1
Query: 1 SRKILLDLGIENKHTRDLNRDELIKIRKEVSEYMIEGDLRRFNEQNIRREIEIKSYRGRR 180
+R+IL+DL +ENK T+D++ +ELI IR EVS+YMIEGDLRRFN IRR EI+ YRG R
Sbjct: 76 ARQILVDLKMENKITKDMSEEELITIRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIR 135
Query: 181 HLLGLPCRGQKTRTNARTLKGKRSAVIRTRK 273
H+ GLPCRGQ T+ N RTLKGKR A+ +K
Sbjct: 136 HIQGLPCRGQHTKNNCRTLKGKRVAIAGKKK 166
>gb|AEC10995.1| 30S ribosomal protein s13 [Camellia sinensis]
Length = 165
Score = 114 bits (286), Expect = 1e-23
Identities = 55/91 (60%), Positives = 70/91 (76%)
Frame = +1
Query: 1 SRKILLDLGIENKHTRDLNRDELIKIRKEVSEYMIEGDLRRFNEQNIRREIEIKSYRGRR 180
SR+IL+DL ++NK T+DL +ELI R +VS+YM+EGD RRFN NIRR EI+ YRG R
Sbjct: 72 SRQILVDLSMDNKITKDLFEEELISFRDQVSKYMVEGDFRRFNALNIRRLKEIQCYRGVR 131
Query: 181 HLLGLPCRGQKTRTNARTLKGKRSAVIRTRK 273
H+ GLPCRGQ+T+ N RTLKGKR A+ +K
Sbjct: 132 HIQGLPCRGQRTKNNCRTLKGKRVAIAGKKK 162
>ref|XP_004290827.1| PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 167
Score = 114 bits (285), Expect = 1e-23
Identities = 58/91 (63%), Positives = 70/91 (76%)
Frame = +1
Query: 1 SRKILLDLGIENKHTRDLNRDELIKIRKEVSEYMIEGDLRRFNEQNIRREIEIKSYRGRR 180
+R IL DL +ENK T+DL+ +EL IR+EVS+YMIEGDLRRFN NIRR EI+ YRG R
Sbjct: 75 ARTILNDLKMENKVTKDLSEEELTIIREEVSKYMIEGDLRRFNALNIRRLKEIQCYRGIR 134
Query: 181 HLLGLPCRGQKTRTNARTLKGKRSAVIRTRK 273
H+ GLPCRGQ+T+ N RTLKGKR V +K
Sbjct: 135 HIQGLPCRGQRTKNNTRTLKGKRVTVAGKKK 165
>ref|XP_003601110.1| 30S ribosomal protein S13 [Medicago truncatula]
gi|355490158|gb|AES71361.1| 30S ribosomal protein S13
[Medicago truncatula] gi|388516343|gb|AFK46233.1|
unknown [Medicago truncatula]
Length = 166
Score = 114 bits (285), Expect = 1e-23
Identities = 54/92 (58%), Positives = 72/92 (78%)
Frame = +1
Query: 1 SRKILLDLGIENKHTRDLNRDELIKIRKEVSEYMIEGDLRRFNEQNIRREIEIKSYRGRR 180
+R+IL D+ +ENK T++L+ +ELI +R EV++YMIEGDLRRFN NI+R EI+ YRG R
Sbjct: 75 ARQILTDISMENKVTKELSEEELISLRDEVNKYMIEGDLRRFNALNIKRLKEIQCYRGIR 134
Query: 181 HLLGLPCRGQKTRTNARTLKGKRSAVIRTRKK 276
H+ GLPCRGQ+T+ N RTLKGK+ V +KK
Sbjct: 135 HIQGLPCRGQRTKNNCRTLKGKKVTVAGKKKK 166
>ref|XP_002302256.1| hypothetical protein POPTR_0002s08900g [Populus trichocarpa]
gi|118488232|gb|ABK95935.1| unknown [Populus
trichocarpa] gi|222843982|gb|EEE81529.1| hypothetical
protein POPTR_0002s08900g [Populus trichocarpa]
Length = 168
Score = 113 bits (283), Expect = 2e-23
Identities = 56/91 (61%), Positives = 71/91 (78%)
Frame = +1
Query: 1 SRKILLDLGIENKHTRDLNRDELIKIRKEVSEYMIEGDLRRFNEQNIRREIEIKSYRGRR 180
+R+IL DL +ENK T+DL+ +ELI +R EVS+Y IEGDLRRFN NIRR EI+ YRG R
Sbjct: 75 ARQILSDLSMENKITKDLSEEELIILRDEVSKYTIEGDLRRFNALNIRRLKEIQCYRGIR 134
Query: 181 HLLGLPCRGQKTRTNARTLKGKRSAVIRTRK 273
H+ GLPCRGQ+T+ N RTLKGKR ++ +K
Sbjct: 135 HIQGLPCRGQRTKNNCRTLKGKRVSIPGKKK 165
>gb|ADP02222.1| putative 30S ribosomal protein S13 [Triticum aestivum]
Length = 171
Score = 113 bits (282), Expect = 3e-23
Identities = 57/94 (60%), Positives = 74/94 (78%)
Frame = +1
Query: 1 SRKILLDLGIENKHTRDLNRDELIKIRKEVSEYMIEGDLRRFNEQNIRREIEIKSYRGRR 180
SR+ILLDL +NK T+DL+ +E+I +RKEV++YMIEGDL+RFN I R EI+ Y+G R
Sbjct: 75 SRQILLDLSFDNKVTKDLSEEEVITLRKEVTKYMIEGDLKRFNRVAIERMKEIRCYKGIR 134
Query: 181 HLLGLPCRGQKTRTNARTLKGKRSAVIRTRKKSA 282
H LGLP RGQ+T+ N RTLKGKR++V +KKSA
Sbjct: 135 HKLGLPVRGQRTKNNCRTLKGKRASV--AKKKSA 166
>ref|XP_003560713.1| PREDICTED: 30S ribosomal protein S13, chloroplastic-like isoform 1
[Brachypodium distachyon]
gi|357117931|ref|XP_003560714.1| PREDICTED: 30S
ribosomal protein S13, chloroplastic-like isoform 2
[Brachypodium distachyon]
Length = 171
Score = 113 bits (282), Expect = 3e-23
Identities = 54/94 (57%), Positives = 73/94 (77%)
Frame = +1
Query: 1 SRKILLDLGIENKHTRDLNRDELIKIRKEVSEYMIEGDLRRFNEQNIRREIEIKSYRGRR 180
SR+ILLDL +NK T+DL+ +E+I +RKEV++YMIEGDL+RFN I R EI+ Y+G R
Sbjct: 75 SRQILLDLSFDNKVTKDLSEEEVITLRKEVTKYMIEGDLKRFNRVAIERMKEIRCYKGIR 134
Query: 181 HLLGLPCRGQKTRTNARTLKGKRSAVIRTRKKSA 282
H LGLP RGQ+T+ N RTLKGKR++V + + S+
Sbjct: 135 HKLGLPVRGQRTKNNCRTLKGKRASVAKKKSSSS 168
>ref|XP_004986289.1| PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Setaria
italica]
Length = 119
Score = 112 bits (281), Expect = 4e-23
Identities = 54/95 (56%), Positives = 73/95 (76%)
Frame = +1
Query: 1 SRKILLDLGIENKHTRDLNRDELIKIRKEVSEYMIEGDLRRFNEQNIRREIEIKSYRGRR 180
SR+ILLDL +NK T+DL+ +E+I +RKEV +YMIEGDL+RFN I R EI+ Y+G R
Sbjct: 23 SRQILLDLNFDNKITKDLSEEEVITLRKEVGKYMIEGDLKRFNRVAIERLKEIRCYKGIR 82
Query: 181 HLLGLPCRGQKTRTNARTLKGKRSAVIRTRKKSAK 285
H LGLP RGQ+T+ N RTLKGKR++V + + S++
Sbjct: 83 HKLGLPVRGQRTKNNCRTLKGKRASVAKKKSSSSQ 117