BLASTX nr result
ID: Ephedra28_contig00025039
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00025039
(358 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004961640.1| PREDICTED: transcription elongation factor S... 82 6e-14
gb|AFW78515.1| hypothetical protein ZEAMMB73_763456 [Zea mays] 82 1e-13
gb|AFW78514.1| hypothetical protein ZEAMMB73_763456 [Zea mays] 82 1e-13
gb|AFW78513.1| hypothetical protein ZEAMMB73_763456 [Zea mays] 82 1e-13
ref|XP_002440004.1| hypothetical protein SORBIDRAFT_09g024270 [S... 82 1e-13
ref|XP_006853115.1| hypothetical protein AMTR_s00038p00136890 [A... 78 1e-12
gb|EMT25860.1| Transcription elongation factor SPT6 [Aegilops ta... 76 5e-12
gb|EMS61141.1| Transcription elongation factor SPT6 [Triticum ur... 76 5e-12
gb|EEE64215.1| hypothetical protein OsJ_19048 [Oryza sativa Japo... 74 2e-11
gb|EAY98543.1| hypothetical protein OsI_20456 [Oryza sativa Indi... 74 2e-11
ref|XP_004493316.1| PREDICTED: transcription elongation factor S... 73 5e-11
ref|XP_004493315.1| PREDICTED: transcription elongation factor S... 73 5e-11
ref|XP_004493314.1| PREDICTED: transcription elongation factor S... 73 5e-11
ref|XP_003566091.1| PREDICTED: transcription elongation factor S... 73 5e-11
gb|ESW34019.1| hypothetical protein PHAVU_001G117200g [Phaseolus... 72 6e-11
ref|XP_002278416.2| PREDICTED: transcription elongation factor S... 72 6e-11
emb|CBI32841.3| unnamed protein product [Vitis vinifera] 72 6e-11
ref|XP_006654589.1| PREDICTED: transcription elongation factor S... 72 8e-11
ref|XP_006339249.1| PREDICTED: transcription elongation factor S... 72 8e-11
ref|XP_006339248.1| PREDICTED: transcription elongation factor S... 72 8e-11
>ref|XP_004961640.1| PREDICTED: transcription elongation factor SPT6-like [Setaria
italica]
Length = 1653
Score = 82.4 bits (202), Expect = 6e-14
Identities = 47/88 (53%), Positives = 54/88 (61%)
Frame = +2
Query: 95 DDVDENGQHIRRRKSKKKVPRQAHGVSSFALQEAQEIFGDVDXXXXXXXXXXXXXXXXXX 274
D++D NGQ +RR+K KKKVPRQA GVSS ALQEAQ+IFGDVD
Sbjct: 192 DEIDGNGQVVRRKKVKKKVPRQAAGVSSSALQEAQDIFGDVD---DLLARRKQEIEREAA 248
Query: 275 XXXXXTSNRLENEFEPSILAEKYMRPED 358
RLE+EFEP ILAEKYM +D
Sbjct: 249 NSGELRGKRLEDEFEPFILAEKYMTTKD 276
>gb|AFW78515.1| hypothetical protein ZEAMMB73_763456 [Zea mays]
Length = 1621
Score = 81.6 bits (200), Expect = 1e-13
Identities = 47/88 (53%), Positives = 54/88 (61%)
Frame = +2
Query: 95 DDVDENGQHIRRRKSKKKVPRQAHGVSSFALQEAQEIFGDVDXXXXXXXXXXXXXXXXXX 274
D++D NGQ +RR+K KKKVPRQA GVSS ALQEAQ+IFGDVD
Sbjct: 195 DEIDGNGQVVRRKKFKKKVPRQAAGVSSSALQEAQDIFGDVD---ELLALRKQELEREAL 251
Query: 275 XXXXXTSNRLENEFEPSILAEKYMRPED 358
RLE+EFEP ILAEKYM +D
Sbjct: 252 NSGELRGARLEDEFEPFILAEKYMTSKD 279
>gb|AFW78514.1| hypothetical protein ZEAMMB73_763456 [Zea mays]
Length = 585
Score = 81.6 bits (200), Expect = 1e-13
Identities = 47/88 (53%), Positives = 54/88 (61%)
Frame = +2
Query: 95 DDVDENGQHIRRRKSKKKVPRQAHGVSSFALQEAQEIFGDVDXXXXXXXXXXXXXXXXXX 274
D++D NGQ +RR+K KKKVPRQA GVSS ALQEAQ+IFGDVD
Sbjct: 196 DEIDGNGQVVRRKKFKKKVPRQAAGVSSSALQEAQDIFGDVD---ELLALRKQELEREAL 252
Query: 275 XXXXXTSNRLENEFEPSILAEKYMRPED 358
RLE+EFEP ILAEKYM +D
Sbjct: 253 NSGELRGARLEDEFEPFILAEKYMTSKD 280
>gb|AFW78513.1| hypothetical protein ZEAMMB73_763456 [Zea mays]
Length = 1622
Score = 81.6 bits (200), Expect = 1e-13
Identities = 47/88 (53%), Positives = 54/88 (61%)
Frame = +2
Query: 95 DDVDENGQHIRRRKSKKKVPRQAHGVSSFALQEAQEIFGDVDXXXXXXXXXXXXXXXXXX 274
D++D NGQ +RR+K KKKVPRQA GVSS ALQEAQ+IFGDVD
Sbjct: 196 DEIDGNGQVVRRKKFKKKVPRQAAGVSSSALQEAQDIFGDVD---ELLALRKQELEREAL 252
Query: 275 XXXXXTSNRLENEFEPSILAEKYMRPED 358
RLE+EFEP ILAEKYM +D
Sbjct: 253 NSGELRGARLEDEFEPFILAEKYMTSKD 280
>ref|XP_002440004.1| hypothetical protein SORBIDRAFT_09g024270 [Sorghum bicolor]
gi|241945289|gb|EES18434.1| hypothetical protein
SORBIDRAFT_09g024270 [Sorghum bicolor]
Length = 1687
Score = 81.6 bits (200), Expect = 1e-13
Identities = 47/88 (53%), Positives = 54/88 (61%)
Frame = +2
Query: 95 DDVDENGQHIRRRKSKKKVPRQAHGVSSFALQEAQEIFGDVDXXXXXXXXXXXXXXXXXX 274
D++D NGQ +RR+K KKKVPRQA GVSS ALQEAQ+IFGDVD
Sbjct: 220 DEIDGNGQVVRRKKYKKKVPRQAAGVSSSALQEAQDIFGDVD---ELLALRKQELEREAA 276
Query: 275 XXXXXTSNRLENEFEPSILAEKYMRPED 358
RLE+EFEP ILAEKYM +D
Sbjct: 277 NSSELRGARLEDEFEPFILAEKYMTTKD 304
>ref|XP_006853115.1| hypothetical protein AMTR_s00038p00136890 [Amborella trichopoda]
gi|548856754|gb|ERN14582.1| hypothetical protein
AMTR_s00038p00136890 [Amborella trichopoda]
Length = 1850
Score = 78.2 bits (191), Expect = 1e-12
Identities = 47/91 (51%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Frame = +2
Query: 95 DDVDENGQHIRRRKSKKKVPRQAHGVSSFALQEAQEIFGDVDXXXXXXXXXXXXXXXXXX 274
++VDENG +RRRK KKKV RQA GVSS ALQEA EIFGDVD
Sbjct: 202 EEVDENGLPVRRRKPKKKVLRQAPGVSSSALQEAHEIFGDVDELLRFRKLGHGKAGDGFD 261
Query: 275 XXXXXTS---NRLENEFEPSILAEKYMRPED 358
RLE+EFEPSIL EKYM +D
Sbjct: 262 GVDDSVDGKPKRLEDEFEPSILEEKYMTEKD 292
>gb|EMT25860.1| Transcription elongation factor SPT6 [Aegilops tauschii]
Length = 1561
Score = 75.9 bits (185), Expect = 5e-12
Identities = 43/88 (48%), Positives = 53/88 (60%)
Frame = +2
Query: 95 DDVDENGQHIRRRKSKKKVPRQAHGVSSFALQEAQEIFGDVDXXXXXXXXXXXXXXXXXX 274
+++D NGQ ++R+K K+K RQA GVSS ALQEA +IFGDVD
Sbjct: 204 EEIDVNGQVVKRKKVKRKPLRQAAGVSSSALQEAHDIFGDVD---ELLALRKQELERDAI 260
Query: 275 XXXXXTSNRLENEFEPSILAEKYMRPED 358
NRLE+EFEP ILAEKYM P+D
Sbjct: 261 NSGELRGNRLEDEFEPFILAEKYMTPKD 288
>gb|EMS61141.1| Transcription elongation factor SPT6 [Triticum urartu]
Length = 1650
Score = 75.9 bits (185), Expect = 5e-12
Identities = 43/88 (48%), Positives = 53/88 (60%)
Frame = +2
Query: 95 DDVDENGQHIRRRKSKKKVPRQAHGVSSFALQEAQEIFGDVDXXXXXXXXXXXXXXXXXX 274
+++D NGQ ++R+K K+K RQA GVSS ALQEA +IFGDVD
Sbjct: 224 EEIDVNGQVVKRKKVKRKPLRQAAGVSSSALQEAHDIFGDVD---ELLALRKQELERDAI 280
Query: 275 XXXXXTSNRLENEFEPSILAEKYMRPED 358
NRLE+EFEP ILAEKYM P+D
Sbjct: 281 NSGELRGNRLEDEFEPFILAEKYMTPKD 308
>gb|EEE64215.1| hypothetical protein OsJ_19048 [Oryza sativa Japonica Group]
Length = 1637
Score = 74.3 bits (181), Expect = 2e-11
Identities = 42/88 (47%), Positives = 51/88 (57%)
Frame = +2
Query: 95 DDVDENGQHIRRRKSKKKVPRQAHGVSSFALQEAQEIFGDVDXXXXXXXXXXXXXXXXXX 274
D++D NGQ ++R+K K + R A GVSS ALQEA +IFGDVD
Sbjct: 199 DEIDANGQVVKRKKGKARPRRPAAGVSSSALQEAHDIFGDVD---ELLALRKQELERDAA 255
Query: 275 XXXXXTSNRLENEFEPSILAEKYMRPED 358
NRLE+EFEP ILAEKYM P+D
Sbjct: 256 NSGELRGNRLEDEFEPFILAEKYMTPKD 283
>gb|EAY98543.1| hypothetical protein OsI_20456 [Oryza sativa Indica Group]
Length = 1627
Score = 74.3 bits (181), Expect = 2e-11
Identities = 42/88 (47%), Positives = 51/88 (57%)
Frame = +2
Query: 95 DDVDENGQHIRRRKSKKKVPRQAHGVSSFALQEAQEIFGDVDXXXXXXXXXXXXXXXXXX 274
D++D NGQ ++R+K K + R A GVSS ALQEA +IFGDVD
Sbjct: 199 DEIDANGQVVKRKKGKARPRRPAAGVSSSALQEAHDIFGDVD---ELLALRKQELERDAA 255
Query: 275 XXXXXTSNRLENEFEPSILAEKYMRPED 358
NRLE+EFEP ILAEKYM P+D
Sbjct: 256 NSGELRGNRLEDEFEPFILAEKYMTPKD 283
>ref|XP_004493316.1| PREDICTED: transcription elongation factor SPT6-like isoform X3
[Cicer arietinum]
Length = 1451
Score = 72.8 bits (177), Expect = 5e-11
Identities = 44/89 (49%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Frame = +2
Query: 95 DDVDENGQHIRRRKSKK-KVPRQAHGVSSFALQEAQEIFGDVDXXXXXXXXXXXXXXXXX 271
++VDENG +R +K K K PRQA GVSS ALQEAQE+FGDVD
Sbjct: 9 EEVDENGAPVRYKKPKGVKRPRQAPGVSSSALQEAQELFGDVD--------ELLEARNQS 60
Query: 272 XXXXXXTSNRLENEFEPSILAEKYMRPED 358
RLE+EFEP +LAEKYM P+D
Sbjct: 61 RELNDYRETRLEDEFEPIVLAEKYMTPKD 89
>ref|XP_004493315.1| PREDICTED: transcription elongation factor SPT6-like isoform X2
[Cicer arietinum]
Length = 1641
Score = 72.8 bits (177), Expect = 5e-11
Identities = 44/89 (49%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Frame = +2
Query: 95 DDVDENGQHIRRRKSKK-KVPRQAHGVSSFALQEAQEIFGDVDXXXXXXXXXXXXXXXXX 271
++VDENG +R +K K K PRQA GVSS ALQEAQE+FGDVD
Sbjct: 197 EEVDENGAPVRYKKPKGVKRPRQAPGVSSSALQEAQELFGDVD--------ELLEARNQS 248
Query: 272 XXXXXXTSNRLENEFEPSILAEKYMRPED 358
RLE+EFEP +LAEKYM P+D
Sbjct: 249 RELNDYRETRLEDEFEPIVLAEKYMTPKD 277
>ref|XP_004493314.1| PREDICTED: transcription elongation factor SPT6-like isoform X1
[Cicer arietinum]
Length = 1639
Score = 72.8 bits (177), Expect = 5e-11
Identities = 44/89 (49%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Frame = +2
Query: 95 DDVDENGQHIRRRKSKK-KVPRQAHGVSSFALQEAQEIFGDVDXXXXXXXXXXXXXXXXX 271
++VDENG +R +K K K PRQA GVSS ALQEAQE+FGDVD
Sbjct: 197 EEVDENGAPVRYKKPKGVKRPRQAPGVSSSALQEAQELFGDVD--------ELLEARNQS 248
Query: 272 XXXXXXTSNRLENEFEPSILAEKYMRPED 358
RLE+EFEP +LAEKYM P+D
Sbjct: 249 RELNDYRETRLEDEFEPIVLAEKYMTPKD 277
>ref|XP_003566091.1| PREDICTED: transcription elongation factor SPT6-like [Brachypodium
distachyon]
Length = 1585
Score = 72.8 bits (177), Expect = 5e-11
Identities = 42/88 (47%), Positives = 52/88 (59%)
Frame = +2
Query: 95 DDVDENGQHIRRRKSKKKVPRQAHGVSSFALQEAQEIFGDVDXXXXXXXXXXXXXXXXXX 274
+++D NGQ ++R+K K+K RQA GVSS ALQEA +IFGDVD
Sbjct: 200 EEIDGNGQVVKRKKVKRKPLRQAAGVSSSALQEAHDIFGDVD---ELLALRKQELERDAF 256
Query: 275 XXXXXTSNRLENEFEPSILAEKYMRPED 358
NRLE+EFEP ILAEKYM +D
Sbjct: 257 NSGELRGNRLEDEFEPFILAEKYMTAKD 284
>gb|ESW34019.1| hypothetical protein PHAVU_001G117200g [Phaseolus vulgaris]
Length = 1679
Score = 72.4 bits (176), Expect = 6e-11
Identities = 42/88 (47%), Positives = 51/88 (57%)
Frame = +2
Query: 95 DDVDENGQHIRRRKSKKKVPRQAHGVSSFALQEAQEIFGDVDXXXXXXXXXXXXXXXXXX 274
++VDENG +R+RK KKK RQA GVSS ALQEAQE+FGD D
Sbjct: 197 EEVDENGAPMRQRKLKKKKTRQAPGVSSSALQEAQELFGDPD--------ELILNRQKNL 248
Query: 275 XXXXXTSNRLENEFEPSILAEKYMRPED 358
RLE+EFEP +L+EKYM +D
Sbjct: 249 EMSEYRETRLEDEFEPIVLSEKYMTEQD 276
>ref|XP_002278416.2| PREDICTED: transcription elongation factor SPT6-like [Vitis
vinifera]
Length = 1660
Score = 72.4 bits (176), Expect = 6e-11
Identities = 43/88 (48%), Positives = 50/88 (56%)
Frame = +2
Query: 95 DDVDENGQHIRRRKSKKKVPRQAHGVSSFALQEAQEIFGDVDXXXXXXXXXXXXXXXXXX 274
++VDE+G +RRRK KK RQA GVSS ALQEA EIFGDVD
Sbjct: 195 EEVDEHGAPVRRRKPNKKKSRQAPGVSSSALQEAHEIFGDVD--------ELLQLRKQGL 246
Query: 275 XXXXXTSNRLENEFEPSILAEKYMRPED 358
RLE+EFEP IL+EKYM +D
Sbjct: 247 DSGEWRERRLEDEFEPIILSEKYMTEKD 274
>emb|CBI32841.3| unnamed protein product [Vitis vinifera]
Length = 1646
Score = 72.4 bits (176), Expect = 6e-11
Identities = 43/88 (48%), Positives = 50/88 (56%)
Frame = +2
Query: 95 DDVDENGQHIRRRKSKKKVPRQAHGVSSFALQEAQEIFGDVDXXXXXXXXXXXXXXXXXX 274
++VDE+G +RRRK KK RQA GVSS ALQEA EIFGDVD
Sbjct: 196 EEVDEHGAPVRRRKPNKKKSRQAPGVSSSALQEAHEIFGDVD--------ELLQLRKQGL 247
Query: 275 XXXXXTSNRLENEFEPSILAEKYMRPED 358
RLE+EFEP IL+EKYM +D
Sbjct: 248 DSGEWRERRLEDEFEPIILSEKYMTEKD 275
>ref|XP_006654589.1| PREDICTED: transcription elongation factor SPT6-like [Oryza
brachyantha]
Length = 1633
Score = 72.0 bits (175), Expect = 8e-11
Identities = 43/90 (47%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Frame = +2
Query: 95 DDVDENGQHIRRRKSKKKV--PRQAHGVSSFALQEAQEIFGDVDXXXXXXXXXXXXXXXX 268
D++D NGQ ++R+K K K P A GVSS ALQEA +IFGDVD
Sbjct: 204 DEIDANGQVVKRKKGKGKPRRPASASGVSSSALQEAHDIFGDVD---ELLALRKQELERD 260
Query: 269 XXXXXXXTSNRLENEFEPSILAEKYMRPED 358
NRLE+EFEP ILAEKYM P+D
Sbjct: 261 AANSGELRGNRLEDEFEPFILAEKYMTPKD 290
>ref|XP_006339249.1| PREDICTED: transcription elongation factor SPT6-like isoform X2
[Solanum tuberosum]
Length = 1642
Score = 72.0 bits (175), Expect = 8e-11
Identities = 42/88 (47%), Positives = 52/88 (59%)
Frame = +2
Query: 95 DDVDENGQHIRRRKSKKKVPRQAHGVSSFALQEAQEIFGDVDXXXXXXXXXXXXXXXXXX 274
++VDE+G IRR+K KK RQA GVSS ALQEA +IFGDVD
Sbjct: 201 EEVDEHGAPIRRKKVNKKKSRQAAGVSSSALQEAHDIFGDVD-ELLMRRKQDRAKSSMHD 259
Query: 275 XXXXXTSNRLENEFEPSILAEKYMRPED 358
+ RLE+EF+P+ILAEKYM +D
Sbjct: 260 ESGEWSERRLEDEFDPTILAEKYMTEKD 287
>ref|XP_006339248.1| PREDICTED: transcription elongation factor SPT6-like isoform X1
[Solanum tuberosum]
Length = 1643
Score = 72.0 bits (175), Expect = 8e-11
Identities = 42/88 (47%), Positives = 52/88 (59%)
Frame = +2
Query: 95 DDVDENGQHIRRRKSKKKVPRQAHGVSSFALQEAQEIFGDVDXXXXXXXXXXXXXXXXXX 274
++VDE+G IRR+K KK RQA GVSS ALQEA +IFGDVD
Sbjct: 202 EEVDEHGAPIRRKKVNKKKSRQAAGVSSSALQEAHDIFGDVD-ELLMRRKQDRAKSSMHD 260
Query: 275 XXXXXTSNRLENEFEPSILAEKYMRPED 358
+ RLE+EF+P+ILAEKYM +D
Sbjct: 261 ESGEWSERRLEDEFDPTILAEKYMTEKD 288