BLASTX nr result
ID: Ephedra28_contig00025038
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00025038
(626 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006853115.1| hypothetical protein AMTR_s00038p00136890 [A... 84 3e-14
gb|EMT25860.1| Transcription elongation factor SPT6 [Aegilops ta... 81 3e-13
gb|EMS61141.1| Transcription elongation factor SPT6 [Triticum ur... 81 3e-13
gb|AFW78515.1| hypothetical protein ZEAMMB73_763456 [Zea mays] 81 3e-13
gb|AFW78514.1| hypothetical protein ZEAMMB73_763456 [Zea mays] 81 3e-13
gb|AFW78513.1| hypothetical protein ZEAMMB73_763456 [Zea mays] 81 3e-13
ref|XP_002440004.1| hypothetical protein SORBIDRAFT_09g024270 [S... 79 8e-13
ref|XP_006482016.1| PREDICTED: transcription elongation factor S... 77 4e-12
ref|XP_006430480.1| hypothetical protein CICLE_v10013566mg, part... 77 4e-12
ref|XP_003566091.1| PREDICTED: transcription elongation factor S... 77 4e-12
ref|XP_004961640.1| PREDICTED: transcription elongation factor S... 76 7e-12
ref|XP_002990250.1| hypothetical protein SELMODRAFT_447972 [Sela... 75 1e-11
gb|EMJ05505.1| hypothetical protein PRUPE_ppa000164mg [Prunus pe... 75 2e-11
ref|XP_002278416.2| PREDICTED: transcription elongation factor S... 75 2e-11
emb|CBI32841.3| unnamed protein product [Vitis vinifera] 75 2e-11
ref|XP_003561333.1| PREDICTED: transcription elongation factor S... 74 4e-11
gb|EEE64215.1| hypothetical protein OsJ_19048 [Oryza sativa Japo... 74 4e-11
gb|EAY98543.1| hypothetical protein OsI_20456 [Oryza sativa Indi... 74 4e-11
ref|XP_006339249.1| PREDICTED: transcription elongation factor S... 73 8e-11
ref|XP_006339248.1| PREDICTED: transcription elongation factor S... 73 8e-11
>ref|XP_006853115.1| hypothetical protein AMTR_s00038p00136890 [Amborella trichopoda]
gi|548856754|gb|ERN14582.1| hypothetical protein
AMTR_s00038p00136890 [Amborella trichopoda]
Length = 1850
Score = 84.0 bits (206), Expect = 3e-14
Identities = 49/80 (61%), Positives = 54/80 (67%), Gaps = 5/80 (6%)
Frame = +3
Query: 402 RRKSKKKVLRQAPGISSLALQEAQDIFGDVDELLILCK--EGLRENGLDGNDEDAS---K 566
RRK KKKVLRQAPG+SS ALQEA +IFGDVDELL K G +G DG D+ K
Sbjct: 213 RRKPKKKVLRQAPGVSSSALQEAHEIFGDVDELLRFRKLGHGKAGDGFDGVDDSVDGKPK 272
Query: 567 SLEKEFEPSILAAKYMRPED 626
LE EFEPSIL KYM +D
Sbjct: 273 RLEDEFEPSILEEKYMTEKD 292
>gb|EMT25860.1| Transcription elongation factor SPT6 [Aegilops tauschii]
Length = 1561
Score = 80.9 bits (198), Expect = 3e-13
Identities = 44/80 (55%), Positives = 56/80 (70%)
Frame = +3
Query: 387 GEKA*RRKSKKKVLRQAPGISSLALQEAQDIFGDVDELLILCKEGLRENGLDGNDEDASK 566
G+ R+K K+K LRQA G+SS ALQEA DIFGDVDELL L K+ L + ++ + ++
Sbjct: 210 GQVVKRKKVKRKPLRQAAGVSSSALQEAHDIFGDVDELLALRKQELERDAINSGELRGNR 269
Query: 567 SLEKEFEPSILAAKYMRPED 626
LE EFEP ILA KYM P+D
Sbjct: 270 -LEDEFEPFILAEKYMTPKD 288
>gb|EMS61141.1| Transcription elongation factor SPT6 [Triticum urartu]
Length = 1650
Score = 80.9 bits (198), Expect = 3e-13
Identities = 44/80 (55%), Positives = 56/80 (70%)
Frame = +3
Query: 387 GEKA*RRKSKKKVLRQAPGISSLALQEAQDIFGDVDELLILCKEGLRENGLDGNDEDASK 566
G+ R+K K+K LRQA G+SS ALQEA DIFGDVDELL L K+ L + ++ + ++
Sbjct: 230 GQVVKRKKVKRKPLRQAAGVSSSALQEAHDIFGDVDELLALRKQELERDAINSGELRGNR 289
Query: 567 SLEKEFEPSILAAKYMRPED 626
LE EFEP ILA KYM P+D
Sbjct: 290 -LEDEFEPFILAEKYMTPKD 308
>gb|AFW78515.1| hypothetical protein ZEAMMB73_763456 [Zea mays]
Length = 1621
Score = 80.9 bits (198), Expect = 3e-13
Identities = 46/80 (57%), Positives = 55/80 (68%)
Frame = +3
Query: 387 GEKA*RRKSKKKVLRQAPGISSLALQEAQDIFGDVDELLILCKEGLRENGLDGNDEDASK 566
G+ R+K KKKV RQA G+SS ALQEAQDIFGDVDELL L K+ L L+ + ++
Sbjct: 201 GQVVRRKKFKKKVPRQAAGVSSSALQEAQDIFGDVDELLALRKQELEREALNSGELRGAR 260
Query: 567 SLEKEFEPSILAAKYMRPED 626
LE EFEP ILA KYM +D
Sbjct: 261 -LEDEFEPFILAEKYMTSKD 279
>gb|AFW78514.1| hypothetical protein ZEAMMB73_763456 [Zea mays]
Length = 585
Score = 80.9 bits (198), Expect = 3e-13
Identities = 46/80 (57%), Positives = 55/80 (68%)
Frame = +3
Query: 387 GEKA*RRKSKKKVLRQAPGISSLALQEAQDIFGDVDELLILCKEGLRENGLDGNDEDASK 566
G+ R+K KKKV RQA G+SS ALQEAQDIFGDVDELL L K+ L L+ + ++
Sbjct: 202 GQVVRRKKFKKKVPRQAAGVSSSALQEAQDIFGDVDELLALRKQELEREALNSGELRGAR 261
Query: 567 SLEKEFEPSILAAKYMRPED 626
LE EFEP ILA KYM +D
Sbjct: 262 -LEDEFEPFILAEKYMTSKD 280
>gb|AFW78513.1| hypothetical protein ZEAMMB73_763456 [Zea mays]
Length = 1622
Score = 80.9 bits (198), Expect = 3e-13
Identities = 46/80 (57%), Positives = 55/80 (68%)
Frame = +3
Query: 387 GEKA*RRKSKKKVLRQAPGISSLALQEAQDIFGDVDELLILCKEGLRENGLDGNDEDASK 566
G+ R+K KKKV RQA G+SS ALQEAQDIFGDVDELL L K+ L L+ + ++
Sbjct: 202 GQVVRRKKFKKKVPRQAAGVSSSALQEAQDIFGDVDELLALRKQELEREALNSGELRGAR 261
Query: 567 SLEKEFEPSILAAKYMRPED 626
LE EFEP ILA KYM +D
Sbjct: 262 -LEDEFEPFILAEKYMTSKD 280
>ref|XP_002440004.1| hypothetical protein SORBIDRAFT_09g024270 [Sorghum bicolor]
gi|241945289|gb|EES18434.1| hypothetical protein
SORBIDRAFT_09g024270 [Sorghum bicolor]
Length = 1687
Score = 79.3 bits (194), Expect = 8e-13
Identities = 45/80 (56%), Positives = 55/80 (68%)
Frame = +3
Query: 387 GEKA*RRKSKKKVLRQAPGISSLALQEAQDIFGDVDELLILCKEGLRENGLDGNDEDASK 566
G+ R+K KKKV RQA G+SS ALQEAQDIFGDVDELL L K+ L + ++ ++
Sbjct: 226 GQVVRRKKYKKKVPRQAAGVSSSALQEAQDIFGDVDELLALRKQELEREAANSSELRGAR 285
Query: 567 SLEKEFEPSILAAKYMRPED 626
LE EFEP ILA KYM +D
Sbjct: 286 -LEDEFEPFILAEKYMTTKD 304
>ref|XP_006482016.1| PREDICTED: transcription elongation factor SPT6-like [Citrus
sinensis]
Length = 1623
Score = 77.0 bits (188), Expect = 4e-12
Identities = 45/75 (60%), Positives = 51/75 (68%)
Frame = +3
Query: 402 RRKSKKKVLRQAPGISSLALQEAQDIFGDVDELLILCKEGLRENGLDGNDEDASKSLEKE 581
R+K KKK RQAPGISS ALQEA DIFGDV+ELL L K+GL + E + LE E
Sbjct: 206 RKKLKKKKNRQAPGISSSALQEAHDIFGDVEELLQLRKQGLE------SSEWRERRLEDE 259
Query: 582 FEPSILAAKYMRPED 626
FEP ILA KYM +D
Sbjct: 260 FEPIILAEKYMTEKD 274
>ref|XP_006430480.1| hypothetical protein CICLE_v10013566mg, partial [Citrus clementina]
gi|557532537|gb|ESR43720.1| hypothetical protein
CICLE_v10013566mg, partial [Citrus clementina]
Length = 1592
Score = 77.0 bits (188), Expect = 4e-12
Identities = 45/75 (60%), Positives = 51/75 (68%)
Frame = +3
Query: 402 RRKSKKKVLRQAPGISSLALQEAQDIFGDVDELLILCKEGLRENGLDGNDEDASKSLEKE 581
R+K KKK RQAPGISS ALQEA DIFGDV+ELL L K+GL + E + LE E
Sbjct: 195 RKKLKKKKNRQAPGISSSALQEAHDIFGDVEELLQLRKQGLE------SSEWRERRLEDE 248
Query: 582 FEPSILAAKYMRPED 626
FEP ILA KYM +D
Sbjct: 249 FEPIILAEKYMTEKD 263
>ref|XP_003566091.1| PREDICTED: transcription elongation factor SPT6-like [Brachypodium
distachyon]
Length = 1585
Score = 77.0 bits (188), Expect = 4e-12
Identities = 43/80 (53%), Positives = 54/80 (67%)
Frame = +3
Query: 387 GEKA*RRKSKKKVLRQAPGISSLALQEAQDIFGDVDELLILCKEGLRENGLDGNDEDASK 566
G+ R+K K+K LRQA G+SS ALQEA DIFGDVDELL L K+ L + + + ++
Sbjct: 206 GQVVKRKKVKRKPLRQAAGVSSSALQEAHDIFGDVDELLALRKQELERDAFNSGELRGNR 265
Query: 567 SLEKEFEPSILAAKYMRPED 626
LE EFEP ILA KYM +D
Sbjct: 266 -LEDEFEPFILAEKYMTAKD 284
>ref|XP_004961640.1| PREDICTED: transcription elongation factor SPT6-like [Setaria
italica]
Length = 1653
Score = 76.3 bits (186), Expect = 7e-12
Identities = 45/80 (56%), Positives = 53/80 (66%)
Frame = +3
Query: 387 GEKA*RRKSKKKVLRQAPGISSLALQEAQDIFGDVDELLILCKEGLRENGLDGNDEDASK 566
G+ R+K KKKV RQA G+SS ALQEAQDIFGDVD+LL K+ + E + E K
Sbjct: 198 GQVVRRKKVKKKVPRQAAGVSSSALQEAQDIFGDVDDLLARRKQEI-EREAANSGELRGK 256
Query: 567 SLEKEFEPSILAAKYMRPED 626
LE EFEP ILA KYM +D
Sbjct: 257 RLEDEFEPFILAEKYMTTKD 276
>ref|XP_002990250.1| hypothetical protein SELMODRAFT_447972 [Selaginella moellendorffii]
gi|300141959|gb|EFJ08665.1| hypothetical protein
SELMODRAFT_447972 [Selaginella moellendorffii]
Length = 1470
Score = 75.5 bits (184), Expect = 1e-11
Identities = 43/79 (54%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Frame = +3
Query: 402 RRKSKKKVLRQAPGISSLALQEAQDIFGDVDELL----ILCKEGLRENGLDGNDEDASKS 569
+R KKK RQAPGISS ALQEAQ+IFGDV +LL I E RE G D+
Sbjct: 201 KRPKKKKYSRQAPGISSSALQEAQEIFGDVSQLLEDRRIRVSEAEREEGAHDEDDAGRGR 260
Query: 570 LEKEFEPSILAAKYMRPED 626
L KEFEPS+L KYM D
Sbjct: 261 LAKEFEPSVLEEKYMTEND 279
>gb|EMJ05505.1| hypothetical protein PRUPE_ppa000164mg [Prunus persica]
Length = 1553
Score = 74.7 bits (182), Expect = 2e-11
Identities = 42/75 (56%), Positives = 51/75 (68%)
Frame = +3
Query: 402 RRKSKKKVLRQAPGISSLALQEAQDIFGDVDELLILCKEGLRENGLDGNDEDASKSLEKE 581
+RK KKK RQAPG+SS ALQEA +IFGDVDELL L K+GL + E + LE E
Sbjct: 126 QRKLKKKKSRQAPGVSSSALQEAHEIFGDVDELLQLRKQGL------DSSEWRERRLEDE 179
Query: 582 FEPSILAAKYMRPED 626
FEP +L+ KYM +D
Sbjct: 180 FEPIVLSEKYMTEKD 194
>ref|XP_002278416.2| PREDICTED: transcription elongation factor SPT6-like [Vitis
vinifera]
Length = 1660
Score = 74.7 bits (182), Expect = 2e-11
Identities = 43/75 (57%), Positives = 50/75 (66%)
Frame = +3
Query: 402 RRKSKKKVLRQAPGISSLALQEAQDIFGDVDELLILCKEGLRENGLDGNDEDASKSLEKE 581
RRK KK RQAPG+SS ALQEA +IFGDVDELL L K+GL + E + LE E
Sbjct: 206 RRKPNKKKSRQAPGVSSSALQEAHEIFGDVDELLQLRKQGL------DSGEWRERRLEDE 259
Query: 582 FEPSILAAKYMRPED 626
FEP IL+ KYM +D
Sbjct: 260 FEPIILSEKYMTEKD 274
>emb|CBI32841.3| unnamed protein product [Vitis vinifera]
Length = 1646
Score = 74.7 bits (182), Expect = 2e-11
Identities = 43/75 (57%), Positives = 50/75 (66%)
Frame = +3
Query: 402 RRKSKKKVLRQAPGISSLALQEAQDIFGDVDELLILCKEGLRENGLDGNDEDASKSLEKE 581
RRK KK RQAPG+SS ALQEA +IFGDVDELL L K+GL + E + LE E
Sbjct: 207 RRKPNKKKSRQAPGVSSSALQEAHEIFGDVDELLQLRKQGL------DSGEWRERRLEDE 260
Query: 582 FEPSILAAKYMRPED 626
FEP IL+ KYM +D
Sbjct: 261 FEPIILSEKYMTEKD 275
>ref|XP_003561333.1| PREDICTED: transcription elongation factor SPT6-like [Brachypodium
distachyon]
Length = 1389
Score = 73.6 bits (179), Expect = 4e-11
Identities = 42/80 (52%), Positives = 55/80 (68%)
Frame = +3
Query: 387 GEKA*RRKSKKKVLRQAPGISSLALQEAQDIFGDVDELLILCKEGLRENGLDGNDEDASK 566
G+ +K K+K LRQA GISS ALQ+A DIFGDVDELL K+ L+ + + + + +
Sbjct: 185 GQVVRSKKLKRKPLRQAVGISSSALQDAHDIFGDVDELLAQRKQDLQSDPAN-SGKLSGN 243
Query: 567 SLEKEFEPSILAAKYMRPED 626
LE EFEP+ILA KYM P+D
Sbjct: 244 MLEDEFEPAILADKYMTPKD 263
>gb|EEE64215.1| hypothetical protein OsJ_19048 [Oryza sativa Japonica Group]
Length = 1637
Score = 73.6 bits (179), Expect = 4e-11
Identities = 41/80 (51%), Positives = 52/80 (65%)
Frame = +3
Query: 387 GEKA*RRKSKKKVLRQAPGISSLALQEAQDIFGDVDELLILCKEGLRENGLDGNDEDASK 566
G+ R+K K + R A G+SS ALQEA DIFGDVDELL L K+ L + + + ++
Sbjct: 205 GQVVKRKKGKARPRRPAAGVSSSALQEAHDIFGDVDELLALRKQELERDAANSGELRGNR 264
Query: 567 SLEKEFEPSILAAKYMRPED 626
LE EFEP ILA KYM P+D
Sbjct: 265 -LEDEFEPFILAEKYMTPKD 283
>gb|EAY98543.1| hypothetical protein OsI_20456 [Oryza sativa Indica Group]
Length = 1627
Score = 73.6 bits (179), Expect = 4e-11
Identities = 41/80 (51%), Positives = 52/80 (65%)
Frame = +3
Query: 387 GEKA*RRKSKKKVLRQAPGISSLALQEAQDIFGDVDELLILCKEGLRENGLDGNDEDASK 566
G+ R+K K + R A G+SS ALQEA DIFGDVDELL L K+ L + + + ++
Sbjct: 205 GQVVKRKKGKARPRRPAAGVSSSALQEAHDIFGDVDELLALRKQELERDAANSGELRGNR 264
Query: 567 SLEKEFEPSILAAKYMRPED 626
LE EFEP ILA KYM P+D
Sbjct: 265 -LEDEFEPFILAEKYMTPKD 283
>ref|XP_006339249.1| PREDICTED: transcription elongation factor SPT6-like isoform X2
[Solanum tuberosum]
Length = 1642
Score = 72.8 bits (177), Expect = 8e-11
Identities = 40/76 (52%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = +3
Query: 402 RRKSKKKVLRQAPGISSLALQEAQDIFGDVDELLILCKEGLRENGL-DGNDEDASKSLEK 578
R+K KK RQA G+SS ALQEA DIFGDVDELL+ K+ ++ + D + E + + LE
Sbjct: 212 RKKVNKKKSRQAAGVSSSALQEAHDIFGDVDELLMRRKQDRAKSSMHDESGEWSERRLED 271
Query: 579 EFEPSILAAKYMRPED 626
EF+P+ILA KYM +D
Sbjct: 272 EFDPTILAEKYMTEKD 287
>ref|XP_006339248.1| PREDICTED: transcription elongation factor SPT6-like isoform X1
[Solanum tuberosum]
Length = 1643
Score = 72.8 bits (177), Expect = 8e-11
Identities = 40/76 (52%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = +3
Query: 402 RRKSKKKVLRQAPGISSLALQEAQDIFGDVDELLILCKEGLRENGL-DGNDEDASKSLEK 578
R+K KK RQA G+SS ALQEA DIFGDVDELL+ K+ ++ + D + E + + LE
Sbjct: 213 RKKVNKKKSRQAAGVSSSALQEAHDIFGDVDELLMRRKQDRAKSSMHDESGEWSERRLED 272
Query: 579 EFEPSILAAKYMRPED 626
EF+P+ILA KYM +D
Sbjct: 273 EFDPTILAEKYMTEKD 288