BLASTX nr result
ID: Ephedra28_contig00024983
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00024983
(578 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC33915.1| hypothetical protein L484_012805 [Morus notabilis] 58 2e-06
gb|EMJ17621.1| hypothetical protein PRUPE_ppa023053mg [Prunus pe... 58 2e-06
ref|XP_004305514.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
ref|XP_006584901.1| PREDICTED: putative pentatricopeptide repeat... 57 5e-06
ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containi... 56 6e-06
emb|CBI16890.3| unnamed protein product [Vitis vinifera] 56 6e-06
ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containi... 56 6e-06
emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera] 56 6e-06
ref|XP_006465489.1| PREDICTED: pentatricopeptide repeat-containi... 56 8e-06
>gb|EXC33915.1| hypothetical protein L484_012805 [Morus notabilis]
Length = 821
Score = 57.8 bits (138), Expect = 2e-06
Identities = 26/67 (38%), Positives = 44/67 (65%)
Frame = -1
Query: 578 NLIMFSVLIEKLCECNKVEQAEELLEKMIMHGFQPRISTYSAMIEAYHEKRNFDAVCRLV 399
N I F+ LI+K CE ++++AEEL++KM+ P ++TY+ +I Y + R+FD C L+
Sbjct: 425 NCITFNTLIDKFCEMKEMDKAEELVKKMVKKEVFPDVATYNTLINGYGQMRDFDK-CFLI 483
Query: 398 MEMQMND 378
+E N+
Sbjct: 484 LEQMENE 490
>gb|EMJ17621.1| hypothetical protein PRUPE_ppa023053mg [Prunus persica]
Length = 803
Score = 57.8 bits (138), Expect = 2e-06
Identities = 26/80 (32%), Positives = 49/80 (61%)
Frame = -1
Query: 578 NLIMFSVLIEKLCECNKVEQAEELLEKMIMHGFQPRISTYSAMIEAYHEKRNFDAVCRLV 399
N++ ++ LI+ C+ V+ A L +++ + GF P + TY AMI Y ++ NF A+ RL+
Sbjct: 220 NVVFYNTLIDGYCKKGDVKNANRLFKELKLKGFFPTLETYGAMINGYCKEGNFKAIDRLL 279
Query: 398 MEMQMNDISIDPDWYKAITE 339
MEM+ ++I+ + +I +
Sbjct: 280 MEMKERGLTINVQVHNSIVD 299
>ref|XP_004305514.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Fragaria vesca subsp. vesca]
Length = 820
Score = 57.4 bits (137), Expect = 3e-06
Identities = 26/80 (32%), Positives = 49/80 (61%)
Frame = -1
Query: 578 NLIMFSVLIEKLCECNKVEQAEELLEKMIMHGFQPRISTYSAMIEAYHEKRNFDAVCRLV 399
N++ ++ LI+ C+ +V +A+ L ++ + GF P + TY A+I Y + NF A+ RL+
Sbjct: 241 NVVFYNTLIDGYCKKGEVGRADGLFRELKLKGFLPTLQTYGALINGYCKDGNFVAIDRLL 300
Query: 398 MEMQMNDISIDPDWYKAITE 339
MEM+ ++++ + AI E
Sbjct: 301 MEMKERGLTVNAQVHNAIVE 320
>ref|XP_006584901.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like isoform X1 [Glycine max]
Length = 555
Score = 56.6 bits (135), Expect = 5e-06
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Frame = -1
Query: 569 MFSVLIEKLCECNKVEQAEELLEKMIMHGFQPRISTYSAMIEAYHEKRNFDAVCRLVMEM 390
M+ V++E C+ K++ AEE L+ +++HG P + TY+ MI A + +FD L+ +M
Sbjct: 441 MYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKM 500
Query: 389 QMNDISIDPDWYKAI--TEDPSNQTEPADFKLLLKMI 285
ND D ++ I N+T+ A+ KL L+MI
Sbjct: 501 DDNDCPPDAVTFETIIGALQERNETDKAE-KLRLEMI 536
>ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 56.2 bits (134), Expect = 6e-06
Identities = 29/99 (29%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Frame = -1
Query: 578 NLIMFSVLIEKLCECNKVEQAEELLEKMIMHGFQPRISTYSAMIEAYHEKRNFDAVCRLV 399
N I++ LI+ C+ K+++A+E+ KM+ HG+ P + TYS++I+ + + D V +++
Sbjct: 679 NTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVL 738
Query: 398 MEMQMNDISIDPDWYKAITEDPSN--QTEPADFKLLLKM 288
+M N + + Y + + S +T+ A +KL+L M
Sbjct: 739 SKMLENSCAPNIVIYTEMIDGLSKVAKTDEA-YKLMLMM 776
>emb|CBI16890.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 56.2 bits (134), Expect = 6e-06
Identities = 26/74 (35%), Positives = 46/74 (62%)
Frame = -1
Query: 566 FSVLIEKLCECNKVEQAEELLEKMIMHGFQPRISTYSAMIEAYHEKRNFDAVCRLVMEMQ 387
F LI C+ ++V+ A+E L +M+ GF P STYS ++++Y+++ N +AV RL E+
Sbjct: 401 FKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELS 460
Query: 386 MNDISIDPDWYKAI 345
+ +D Y+A+
Sbjct: 461 RKGLFVDISVYRAL 474
>ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 56.2 bits (134), Expect = 6e-06
Identities = 26/74 (35%), Positives = 46/74 (62%)
Frame = -1
Query: 566 FSVLIEKLCECNKVEQAEELLEKMIMHGFQPRISTYSAMIEAYHEKRNFDAVCRLVMEMQ 387
F LI C+ ++V+ A+E L +M+ GF P STYS ++++Y+++ N +AV RL E+
Sbjct: 408 FKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELS 467
Query: 386 MNDISIDPDWYKAI 345
+ +D Y+A+
Sbjct: 468 RKGLFVDISVYRAL 481
>emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 56.2 bits (134), Expect = 6e-06
Identities = 26/74 (35%), Positives = 46/74 (62%)
Frame = -1
Query: 566 FSVLIEKLCECNKVEQAEELLEKMIMHGFQPRISTYSAMIEAYHEKRNFDAVCRLVMEMQ 387
F LI C+ ++V+ A+E L +M+ GF P STYS ++++Y+++ N +AV RL E+
Sbjct: 408 FKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELS 467
Query: 386 MNDISIDPDWYKAI 345
+ +D Y+A+
Sbjct: 468 RKGLFVDISVYRAL 481
>ref|XP_006465489.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Citrus sinensis]
Length = 1259
Score = 55.8 bits (133), Expect = 8e-06
Identities = 24/80 (30%), Positives = 49/80 (61%)
Frame = -1
Query: 578 NLIMFSVLIEKLCECNKVEQAEELLEKMIMHGFQPRISTYSAMIEAYHEKRNFDAVCRLV 399
N++ ++ LI+ C+ VE A +L +++ M GF P + TY A+I + +K +F + L+
Sbjct: 684 NIVFYNTLIDGYCKKGDVENARKLFKELKMKGFLPTLETYGAIISGFCKKGSFKGIDGLM 743
Query: 398 MEMQMNDISIDPDWYKAITE 339
MEM+ +++++ Y +I +
Sbjct: 744 MEMKQRNLNVNVRVYNSIID 763