BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00024975
         (1543 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006832985.1| hypothetical protein AMTR_s00221p00020810 [A...   328   3e-87
ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containi...   327   6e-87
emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]   327   6e-87
ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containi...   314   6e-83
ref|XP_002523294.1| pentatricopeptide repeat-containing protein,...   313   2e-82
gb|EPS72483.1| hypothetical protein M569_02271, partial [Genlise...   311   5e-82
ref|XP_004308728.1| PREDICTED: pentatricopeptide repeat-containi...   310   1e-81
gb|EOX95633.1| Pentatricopeptide repeat (PPR-like) superfamily p...   308   3e-81
gb|EXC20587.1| hypothetical protein L484_027142 [Morus notabilis]     305   3e-80
ref|XP_006491330.1| PREDICTED: pentatricopeptide repeat-containi...   298   3e-78
ref|XP_006444781.1| hypothetical protein CICLE_v10024306mg [Citr...   298   3e-78
gb|EMJ21218.1| hypothetical protein PRUPE_ppa003879mg [Prunus pe...   296   2e-77
ref|XP_006287468.1| hypothetical protein CARUB_v10000680mg [Caps...   294   6e-77
ref|NP_197146.1| pentatricopeptide repeat-containing protein [Ar...   292   3e-76
ref|XP_006339749.1| PREDICTED: pentatricopeptide repeat-containi...   291   7e-76
ref|XP_002317747.2| hypothetical protein POPTR_0012s01390g, part...   290   1e-75
ref|XP_004230006.1| PREDICTED: pentatricopeptide repeat-containi...   290   1e-75
ref|XP_002871717.1| pentatricopeptide repeat-containing protein ...   290   1e-75
ref|XP_006400179.1| hypothetical protein EUTSA_v10013226mg [Eutr...   288   3e-75
ref|XP_003623067.1| Pentatricopeptide repeat-containing protein ...   265   5e-68

>ref|XP_006832985.1| hypothetical protein AMTR_s00221p00020810 [Amborella trichopoda]
            gi|548837495|gb|ERM98263.1| hypothetical protein
            AMTR_s00221p00020810 [Amborella trichopoda]
          Length = 549

 Score =  328 bits (842), Expect = 3e-87
 Identities = 174/450 (38%), Positives = 264/450 (58%)
 Frame = +2

Query: 134  KRPTVRPPIEDWPVHLYPRLLYNIIKKAESTKLALTIFNYAGKHHYNYRHSSLTYLKIIE 313
            K+  V PP+  WP+ L P+ L N+I + ++  LAL  F+YAGK+H N+ H+  TY  IIE
Sbjct: 52   KKHKVTPPLTRWPLKLSPKRLINMINQQQNVDLALQFFDYAGKYHPNFSHNPDTYHTIIE 111

Query: 314  RLLGELEFTKVEEVLGQLRKENFYPSESIFIRVIRGYGYANKPDEAEHMFRTIPLYRRCK 493
            +L    +F  +E  L +L+      SE  FI VIR YG+ANKP  A   F  +  +    
Sbjct: 112  KLARARDFNSMEITLKELKDSRIQCSEKTFIVVIRNYGFANKPKMALRSFFKMNEFG-IN 170

Query: 494  QSHATFNVLLSVLFSTGNYDRVYNLYHSCGTFGLRPNVMSCNMLIKSLCKQGYLALAKQV 673
            +S  +FN LL+ +  T  +D V+ LY +C  FG+ PN+ +CN+LIK+LC+   L  A +V
Sbjct: 171  KSIRSFNTLLNAMIQTKRFDLVHILYKNCQKFGIFPNIFTCNILIKALCQMNNLESAFRV 230

Query: 674  YANMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNSLIDGYCK 853
               MP  GF P PVTY  ++ G C  GD+  A++IFD  + KG +  P  Y  +IDG+CK
Sbjct: 231  LEEMPSQGFVPNPVTYTTILSGFCARGDLIRAKRIFDEIITKGWVPDPITYTVMIDGFCK 290

Query: 854  AGNLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESS 1033
             G L +A+K+  +M + GV   D+TY ++IE  C + R  EAL L  E+++K   F   S
Sbjct: 291  KGRLMDAVKLMDDMEENGVLPNDVTYGVVIESYCKEGRSGEALSLLNEMLEK--KFIPCS 348

Query: 1034 RLCCVVLGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETLIHWLFKIGDIKKGKRLFQD 1213
             LCC ++  +C+  +V+EA  LW++LL + C+P + +Y TLI+WL K   IK+ ++LF +
Sbjct: 349  TLCCKIVDLLCQESKVDEACVLWKKLLKRNCIPDNAIYSTLIYWLCKGEKIKEARKLFDE 408

Query: 1214 MCNQDVATVSGYNVMIRGLCEVGQLQEACKVWDGMLMTDLVPDESSYAWLILGFCQGGMA 1393
                 + ++  YN +I  +CE G+LQEA ++WD M+    VP+  +Y  LI GF   G  
Sbjct: 409  FEKGFLPSILTYNTLISAMCEKGELQEAGRLWDNMIEKGCVPNVFTYNILIKGFSIIGRG 468

Query: 1394 KEGVEILLDMMLSMDLVPDVSLFRKVMPGF 1483
            +EG+ + L+ ML      + S +  +M GF
Sbjct: 469  REGLRV-LEEMLEKRCEANKSTYAILMDGF 497


>ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
            mitochondrial [Vitis vinifera]
            gi|296089757|emb|CBI39576.3| unnamed protein product
            [Vitis vinifera]
          Length = 586

 Score =  327 bits (839), Expect = 6e-87
 Identities = 171/461 (37%), Positives = 270/461 (58%), Gaps = 1/461 (0%)
 Frame = +2

Query: 134  KRPTVRPPIEDWPVHLYPRLLYNIIKKAESTKLALTIFNYAGKHHYNYRHSSLTYLKIIE 313
            K  TV PPI+ WP  L P+ + ++I + ++  LAL IF++AGK H N+ H+  TYL +IE
Sbjct: 84   KSYTVTPPIKPWPQRLSPKRVVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIE 143

Query: 314  RLLGELEFTKVEEVLGQLRKENFYPSESIFIRVIRGYGYANKPDEAEHMFRTIPLYRRCK 493
            +L     F  +E ++ QL K      E++FI VIR YG+A +P  A   F  IP +   +
Sbjct: 144  KLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFG-LQ 202

Query: 494  QSHATFNVLLSVLFSTGNYDRVYNLYHSCGT-FGLRPNVMSCNMLIKSLCKQGYLALAKQ 670
             S  +FN LL+ L     +D V+ ++ +C   FG+ PNV +CN+L+K+LCK+  +  A +
Sbjct: 203  PSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIR 262

Query: 671  VYANMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNSLIDGYC 850
            V   MP +GF P  VTY  ++ G+   GDM  AR++F   L +G +  P+ Y  L+DGYC
Sbjct: 263  VLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYC 322

Query: 851  KAGNLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQES 1030
            K G   +A+K+   M +  VE  D+TY ++IE  C + +  E L L  ++++K  +   S
Sbjct: 323  KKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYI--PS 380

Query: 1031 SRLCCVVLGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETLIHWLFKIGDIKKGKRLFQ 1210
            S LCC V+  +C+ G+VE A +LW++LL K C P + +  TLIHWL K G + + ++LF 
Sbjct: 381  SALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFD 440

Query: 1211 DMCNQDVATVSGYNVMIRGLCEVGQLQEACKVWDGMLMTDLVPDESSYAWLILGFCQGGM 1390
            +     + +   YN +I G+CE G+L EA ++WD M+    VP+  +Y  LI GFC+ G 
Sbjct: 441  EFEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGN 500

Query: 1391 AKEGVEILLDMMLSMDLVPDVSLFRKVMPGFSKLSSEQACT 1513
            A+EG+ + ++ ML    +P+ + +  ++ G  +L  E   T
Sbjct: 501  AREGIRV-MEEMLDNGCLPNKATYAILLEGLYELGLEGEVT 540


>emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
          Length = 844

 Score =  327 bits (839), Expect = 6e-87
 Identities = 171/461 (37%), Positives = 270/461 (58%), Gaps = 1/461 (0%)
 Frame = +2

Query: 134  KRPTVRPPIEDWPVHLYPRLLYNIIKKAESTKLALTIFNYAGKHHYNYRHSSLTYLKIIE 313
            K  TV PPI+ WP  L P+ + ++I + ++  LAL IF++AGK H N+ H+  TYL +IE
Sbjct: 84   KSYTVTPPIKPWPQRLSPKRVVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIE 143

Query: 314  RLLGELEFTKVEEVLGQLRKENFYPSESIFIRVIRGYGYANKPDEAEHMFRTIPLYRRCK 493
            +L     F  +E ++ QL K      E++FI VIR YG+A +P  A   F  IP +   +
Sbjct: 144  KLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFG-LQ 202

Query: 494  QSHATFNVLLSVLFSTGNYDRVYNLYHSCGT-FGLRPNVMSCNMLIKSLCKQGYLALAKQ 670
             S  +FN LL+ L     +D V+ ++ +C   FG+ PNV +CN+L+K+LCK+  +  A +
Sbjct: 203  PSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIR 262

Query: 671  VYANMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNSLIDGYC 850
            V   MP +GF P  VTY  ++ G+   GDM  AR++F   L +G +  P+ Y  L+DGYC
Sbjct: 263  VLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYC 322

Query: 851  KAGNLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQES 1030
            K G   +A+K+   M +  VE  D+TY ++IE  C + +  E L L  ++++K  +   S
Sbjct: 323  KKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYI--PS 380

Query: 1031 SRLCCVVLGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETLIHWLFKIGDIKKGKRLFQ 1210
            S LCC V+  +C+ G+VE A +LW++LL K C P + +  TLIHWL K G + + ++LF 
Sbjct: 381  SALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFD 440

Query: 1211 DMCNQDVATVSGYNVMIRGLCEVGQLQEACKVWDGMLMTDLVPDESSYAWLILGFCQGGM 1390
            +     + +   YN +I G+CE G+L EA ++WD M+    VP+  +Y  LI GFC+ G 
Sbjct: 441  EFEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGN 500

Query: 1391 AKEGVEILLDMMLSMDLVPDVSLFRKVMPGFSKLSSEQACT 1513
            A+EG+ + ++ ML    +P+ + +  ++ G  +L  E   T
Sbjct: 501  AREGIRV-MEEMLDNGCLPNKATYAILLEGLYELGLEGEVT 540


>ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
            mitochondrial-like [Cucumis sativus]
            gi|449492939|ref|XP_004159147.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g16420,
            mitochondrial-like [Cucumis sativus]
          Length = 535

 Score =  314 bits (805), Expect = 6e-83
 Identities = 176/472 (37%), Positives = 274/472 (58%), Gaps = 2/472 (0%)
 Frame = +2

Query: 122  EGPDKRPTVRPPIEDWPVHLYPRLLYNIIKKAESTKLALTIFNYAGKHHYNYRHSSLTYL 301
            E P +  TV PPI+ WP  L+P  L  +I++ ++  LAL IF+YAGK+H  + H+  TY 
Sbjct: 31   ETPLQSYTVTPPIKPWPQRLFPNRLVAMIRRQQNLDLALQIFHYAGKYHPAFTHNYDTYH 90

Query: 302  KIIERLLGELEFTKVEEVLGQLRKENFYPSESIFIRVIRGYGYANKPDEAEHMFRTIPLY 481
             II RL     F  VE +L +L+      SE +FI VIR YG A++P  A   F  I  +
Sbjct: 91   AIIYRLSRARAFEPVESLLLELQDSGINCSEDLFITVIRSYGLASRPKMALKTFLRIQTF 150

Query: 482  RRCKQSHATFNVLLSVLFSTGNYDRVYNLY-HSCGTFGLRPNVMSCNMLIKSLCKQGYLA 658
               ++S  + N LL+ L     +  V+ L+ +S   FG+ PNV +CN+LIK+LCK+  + 
Sbjct: 151  G-VRRSVRSLNTLLNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDVE 209

Query: 659  LAKQVYANMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNSLI 838
             A++V+  MP +G  P  VTY  ++ G+   GDM  A+++F      G L   + Y  L+
Sbjct: 210  GARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTILM 269

Query: 839  DGYCKAGNLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNV 1018
            DGY K G   +A+K+   M + GVE  D+TY ++I G C + +  EAL L  ++++K  +
Sbjct: 270  DGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYI 329

Query: 1019 FQESSRLCCVVLGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETLIHWLFKIGDIKKGK 1198
               +S LCC V+  +C  GRV+EA K+WE+LL K C P + +  TLIHWL K G+I + +
Sbjct: 330  --PNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEAR 387

Query: 1199 RLFQDMCNQDVATVSGYNVMIRGLCEVGQLQEACKVWDGMLMTDLVPDESSYAWLILGFC 1378
            +LF +     ++++  YN +I G+CE+G+L EA ++WD ML    VP+E +Y  LI GF 
Sbjct: 388  KLFNEFERGTISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKGFL 447

Query: 1379 QGGMAKEGVEILLDMMLSMDLVPDVSLFRKVMPGFSKLSS-EQACTLLEEIL 1531
            + G AKE +++ ++ ML    + + S +  ++ G  KL   E+   +L  I+
Sbjct: 448  KVGKAKEVIKV-VEEMLDKGCLLNESTYLILVEGLLKLGKREELLNILSMII 498



 Score = 90.9 bits (224), Expect = 1e-15
 Identities = 62/252 (24%), Positives = 118/252 (46%)
 Frame = +2

Query: 506  TFNVLLSVLFSTGNYDRVYNLYHSCGTFGLRPNVMSCNMLIKSLCKQGYLALAKQVYANM 685
            T+ +L+      G +     +       G+ PN ++  ++I   CK+     A  +  +M
Sbjct: 264  TYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDM 323

Query: 686  PRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNSLIDGYCKAGNL 865
                + P       +++  C  G +  A K+++  L+K      +  ++LI   CK GN+
Sbjct: 324  LEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNI 383

Query: 866  DEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRLCC 1045
             EA K+  N  ++G     LTY  LI G+C+     EA  L+ ++++K  V  E +    
Sbjct: 384  WEARKLF-NEFERGTISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYN-- 440

Query: 1046 VVLGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETLIHWLFKIGDIKKGKRLFQDMCNQ 1225
            +++ G  KVG+ +E +K+ EE+LDKGCL +   Y  L+  L K+G  ++   +   + + 
Sbjct: 441  MLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYLILVEGLLKLGKREELLNILSMIISS 500

Query: 1226 DVATVSGYNVMI 1261
                   +N+ +
Sbjct: 501  GAVDFKAWNLFV 512


>ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223537382|gb|EEF39010.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 544

 Score =  313 bits (801), Expect = 2e-82
 Identities = 169/454 (37%), Positives = 262/454 (57%), Gaps = 1/454 (0%)
 Frame = +2

Query: 143  TVRPPIEDWPVHLYPRLLYNIIKKAESTKLALTIFNYAGKHHYNYRHSSLTYLKIIERLL 322
            TV PPI+ WP  LYP+ L ++I + ++  LAL IF YAGK+  N+ H+  TY  II +L 
Sbjct: 47   TVTPPIKPWPQRLYPKRLVSMITRQQNLDLALQIFEYAGKYQPNFSHNYDTYDSIIHKLS 106

Query: 323  GELEFTKVEEVLGQLRKENFYPSESIFIRVIRGYGYANKPDEAEHMFRTIPLYRRCKQSH 502
                F  VE +L  L K      E+IFI VIR YG A KPD A   F  I  +   ++S 
Sbjct: 107  RARVFGPVELLLSDLHKSQIKCGENIFINVIRNYGLAGKPDFALRTFIRIQDFN-VQRSV 165

Query: 503  ATFNVLLSVLFSTGNYDRVYNLYHSCGT-FGLRPNVMSCNMLIKSLCKQGYLALAKQVYA 679
             + N LL+       YD V+ ++ +C + +G+ PNV +CN+LIK+LCK+  +  A +V  
Sbjct: 166  RSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILIKALCKKNDVESAVKVLD 225

Query: 680  NMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNSLIDGYCKAG 859
             MP +G  P  VTY  ++ G+   GDM  A K+F     +G L   + Y  L++GYC+ G
Sbjct: 226  EMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQG 285

Query: 860  NLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRL 1039
             L +A+K+  +M + GVE  ++TY +++E  C + +  EA  L  +++++  V   SS L
Sbjct: 286  RLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYV--PSSAL 343

Query: 1040 CCVVLGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETLIHWLFKIGDIKKGKRLFQDMC 1219
            CC V+  +C+ G++EEA +LW+ +L K C+P + +  TLIHWL K G + + ++LF +  
Sbjct: 344  CCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFE 403

Query: 1220 NQDVATVSGYNVMIRGLCEVGQLQEACKVWDGMLMTDLVPDESSYAWLILGFCQGGMAKE 1399
               + ++  YN +I G+CE G+L EA K+WD M+     P+  +Y  LI GF + G AKE
Sbjct: 404  RGAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKE 463

Query: 1400 GVEILLDMMLSMDLVPDVSLFRKVMPGFSKLSSE 1501
            G+ I L+ ML    +P+ S +  ++    K+  E
Sbjct: 464  GIRI-LEEMLDNRCMPNKSTYAILIEELCKMGME 496


>gb|EPS72483.1| hypothetical protein M569_02271, partial [Genlisea aurea]
          Length = 444

 Score =  311 bits (797), Expect = 5e-82
 Identities = 167/447 (37%), Positives = 257/447 (57%), Gaps = 1/447 (0%)
 Frame = +2

Query: 143  TVRPPIEDWPVHLYPRLLYNIIKKAESTKLALTIFNYAGKHHYNYRHSSLTYLKIIERLL 322
            TV PPI+ WP  L PR L +II + ++  LAL IF++AG HH N+RH+  TY  I+ +L 
Sbjct: 1    TVTPPIKPWPQKLSPRRLCSIIAQQQNLDLALQIFHHAGNHHPNFRHNYDTYNAIVNKLA 60

Query: 323  GELEFTKVEEVLGQLRKENFYPSESIFIRVIRGYGYANKPDEAEHMFRTIPLYRRCKQSH 502
                F  +  +L  L+K      E++FI +IR YG A+KP EA  +F  I  +   K+S 
Sbjct: 61   RARAFEPIAGLLIDLKKSGIDCGENLFISLIRNYGIASKPKEAIKIFLRINDFG-VKRSV 119

Query: 503  ATFNVLLSVLFSTGNYDRVYNLYHSCGT-FGLRPNVMSCNMLIKSLCKQGYLALAKQVYA 679
             + N LL+ L     YD V+ ++ +C   F + PNV +CN+L+K+LCK+  +  A  V  
Sbjct: 120  RSLNTLLNALVQNKKYDSVHFVFKNCHKKFDVLPNVFTCNILLKALCKKDTVEGALNVLD 179

Query: 680  NMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNSLIDGYCKAG 859
             MP +G  P  V+Y  +M G+ + GDM  A+++FD  L +G L   + Y  L++G+CK G
Sbjct: 180  EMPSMGLVPNVVSYTTVMGGYVDRGDMTSAKRVFDELLDRGWLPDATTYTVLMNGFCKLG 239

Query: 860  NLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRL 1039
            N  +A KI   M D  VE  D+TY ++IE LC + +  EA  +  +++DK  +   S  L
Sbjct: 240  NFLQATKIMDEMADNEVEPNDVTYGVMIEALCREGKPGEAANMVSDMLDKKYIPTPS--L 297

Query: 1040 CCVVLGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETLIHWLFKIGDIKKGKRLFQDMC 1219
            CC V+  +C+   VEEA KLW  LL K C P   +  TLI+WL K G +++  +LF +  
Sbjct: 298  CCRVIDVLCRAAMVEEACKLWRTLLSKNCTPDGTILSTLIYWLCKEGRVREASKLFDEFE 357

Query: 1220 NQDVATVSGYNVMIRGLCEVGQLQEACKVWDGMLMTDLVPDESSYAWLILGFCQGGMAKE 1399
               + ++  YN +I G+C+ G+L+EA ++WD M+     P+  +Y  +I G C+ G AK+
Sbjct: 358  KGSIPSLLAYNTLISGMCDGGELREAGRIWDAMVRRGCRPNSYTYGAMIRGLCEAGFAKD 417

Query: 1400 GVEILLDMMLSMDLVPDVSLFRKVMPG 1480
            G+  L++ M+   L PD S   ++  G
Sbjct: 418  GMR-LVEEMVETGLCPDESTLYRLRRG 443



 Score = 58.9 bits (141), Expect = 6e-06
 Identities = 44/206 (21%), Positives = 95/206 (46%)
 Frame = +2

Query: 335 FTKVEEVLGQLRKENFYPSESIFIRVIRGYGYANKPDEAEHMFRTIPLYRRCKQSHATFN 514
           F +  +++ ++      P++  +  +I       KP EA +M   + L ++   + +   
Sbjct: 241 FLQATKIMDEMADNEVEPNDVTYGVMIEALCREGKPGEAANMVSDM-LDKKYIPTPSLCC 299

Query: 515 VLLSVLFSTGNYDRVYNLYHSCGTFGLRPNVMSCNMLIKSLCKQGYLALAKQVYANMPRL 694
            ++ VL      +    L+ +  +    P+    + LI  LCK+G +  A +++    + 
Sbjct: 300 RVIDVLCRAAMVEEACKLWRTLLSKNCTPDGTILSTLIYWLCKEGRVREASKLFDEFEK- 358

Query: 695 GFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNSLIDGYCKAGNLDEA 874
           G  P+ + Y  L+ G C+ G++  A +I+D  +R+G       Y ++I G C+AG   + 
Sbjct: 359 GSIPSLLAYNTLISGMCDGGELREAGRIWDAMVRRGCRPNSYTYGAMIRGLCEAGFAKDG 418

Query: 875 LKIGKNMRDKGVEKLDLTYALLIEGL 952
           +++ + M + G+   + T   L  GL
Sbjct: 419 MRLVEEMVETGLCPDESTLYRLRRGL 444


>ref|XP_004308728.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
            mitochondrial-like, partial [Fragaria vesca subsp. vesca]
          Length = 506

 Score =  310 bits (793), Expect = 1e-81
 Identities = 171/459 (37%), Positives = 259/459 (56%), Gaps = 1/459 (0%)
 Frame = +2

Query: 128  PDKRPTVRPPIEDWPVHLYPRLLYNIIKKAESTKLALTIFNYAGKHHYNYRHSSLTYLKI 307
            P    TV PPI +WP HL+P+ L ++I +  +  LAL IF++A +HH  +RH+  TY  +
Sbjct: 4    PSSSYTVTPPIPNWPHHLHPKRLISLITREPNLDLALRIFHHASQHHPGFRHNYHTYHSL 63

Query: 308  IERLLGELEFTKVEEVLGQLRKENFYPSESIFIRVIRGYGYANKPDEAEHMFRTIPLYRR 487
            I RLL       ++ +L  L +      E +F+ +IR YG  ++P+ A   F +IP +R 
Sbjct: 64   ILRLLRSRALHLIDPLLSDLLRSRLRCHEDLFVSLIRHYGVVSRPNLAFKTFLSIPKFR- 122

Query: 488  CKQSHATFNVLLSVLFSTGNYDRVYNLYHSCGT-FGLRPNVMSCNMLIKSLCKQGYLALA 664
             ++S  + N LL+ L    + D V++++ S    FG+ PNV SCN+LIK+LCK+  L  A
Sbjct: 123  AERSVRSLNALLNALVQNRSCDLVHSVFRSSKERFGVSPNVSSCNILIKALCKRNDLETA 182

Query: 665  KQVYANMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNSLIDG 844
            +QV   MP +GF P  V++  ++ G+    DM  A+++F   L +G     + Y  L+DG
Sbjct: 183  RQVLDEMPAMGFVPNVVSFTTILGGYVSRRDMVGAKRVFGEILDRGWCPDATTYTVLMDG 242

Query: 845  YCKAGNLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQ 1024
            Y K G L EA+K+   M D GV   ++TY ++IEG C   +  EA+ L  +++DK  V  
Sbjct: 243  YVKEGKLVEAVKVMDEMEDNGVGANEVTYGVMIEGYCKGRKGGEAVNLLNDMVDKRYV-- 300

Query: 1025 ESSRLCCVVLGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETLIHWLFKIGDIKKGKRL 1204
              S LCC V+  +C  G+VE A +LW  LL K C+P + V  TLI+WL K G + + ++L
Sbjct: 301  PCSALCCKVVDVLCCQGKVENACELWRRLLKKNCMPDNAVLGTLIYWLCKKGKVWEARKL 360

Query: 1205 FQDMCNQDVATVSGYNVMIRGLCEVGQLQEACKVWDGMLMTDLVPDESSYAWLILGFCQG 1384
            F      +   V  YNV+I G+CE G+L EA ++WD M+     P+  +Y  LI GFC+ 
Sbjct: 361  FDQFETSEPPDVMTYNVLISGMCEAGELCEAGRLWDDMVEKGYTPNSFTYNVLIKGFCKI 420

Query: 1385 GMAKEGVEILLDMMLSMDLVPDVSLFRKVMPGFSKLSSE 1501
              A EG+ I LD ML    +P+ S +  +M G      E
Sbjct: 421  KKATEGIRI-LDEMLEKGCLPNKSTYAMLMEGLCDSGEE 458



 Score = 84.0 bits (206), Expect = 2e-13
 Identities = 67/270 (24%), Positives = 119/270 (44%), Gaps = 7/270 (2%)
 Frame = +2

Query: 293  TYLKIIERLLGELEFTKVEEVLGQLRKENFYPSESIFIRVIRGYGYANKPDEAEHMFRTI 472
            TY  +++  + E +  +  +V+ ++       +E  +  +I GY    K  EA ++   +
Sbjct: 235  TYTVLMDGYVKEGKLVEAVKVMDEMEDNGVGANEVTYGVMIEGYCKGRKGGEAVNLLNDM 294

Query: 473  PLYRRCKQSHATFNVLLSVLFSTGNYDRVYNLYHSCGTFGLRPNVMSCNMLIKSLCKQGY 652
             + +R     A    ++ VL   G  +    L+         P+      LI  LCK+G 
Sbjct: 295  -VDKRYVPCSALCCKVVDVLCCQGKVENACELWRRLLKKNCMPDNAVLGTLIYWLCKKGK 353

Query: 653  LALAKQVYANMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNS 832
            +  A++++         P  +TY  L+ G CEAG++  A +++D  + KG       YN 
Sbjct: 354  VWEARKLFDQF-ETSEPPDVMTYNVLISGMCEAGELCEAGRLWDDMVEKGYTPNSFTYNV 412

Query: 833  LIDGYCKAGNLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELI--- 1003
            LI G+CK     E ++I   M +KG      TYA+L+EGLCD     E   L    +   
Sbjct: 413  LIKGFCKIKKATEGIRILDEMLEKGCLPNKSTYAMLMEGLCDSGEEAEINRLISMAMSSG 472

Query: 1004 ----DKWNVFQESSRLCCVVLGGMCKVGRV 1081
                D W++F   +++ C +  G   + R+
Sbjct: 473  HVDSDSWDLF--LTKVVCDLDSGESVLNRI 500


>gb|EOX95633.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
            cacao]
          Length = 545

 Score =  308 bits (790), Expect = 3e-81
 Identities = 166/454 (36%), Positives = 258/454 (56%), Gaps = 1/454 (0%)
 Frame = +2

Query: 143  TVRPPIEDWPVHLYPRLLYNIIKKAESTKLALTIFNYAGKHHYNYRHSSLTYLKIIERLL 322
            TV PPI+ WP  LYP+ L ++I   ++  LAL IF YAGK H N+ H+  TY  II +L 
Sbjct: 44   TVTPPIKPWPQRLYPKRLVSMITCQQNLDLALQIFLYAGKFHPNFYHNYDTYHSIIHKLC 103

Query: 323  GELEFTKVEEVLGQLRKENFYPSESIFIRVIRGYGYANKPDEAEHMFRTIPLYRRCKQSH 502
                F  +E +L QL+       E++FI VIR YG A++P  A   F  I  +   ++S 
Sbjct: 104  RARAFEPMESLLSQLQDSQIKCGENLFISVIRNYGLASRPKLALKTFLRIENFN-VQRSV 162

Query: 503  ATFNVLLSVLFSTGNYDRVYNLYHSCGT-FGLRPNVMSCNMLIKSLCKQGYLALAKQVYA 679
             + N LL+ L     YD V+ ++ +  T FG+ PNV +CN+LIK+LC++  +  A +V+ 
Sbjct: 163  RSLNTLLNALVQNKRYDLVHIMFKNSKTKFGVVPNVFTCNILIKALCQENDVEAAYKVFD 222

Query: 680  NMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNSLIDGYCKAG 859
             MP +G  P  VTY  ++ G+   GDM  A+++F   L +G +   + Y  L+DGYC+ G
Sbjct: 223  EMPSMGMVPNVVTYTTILGGYVARGDMKNAKRVFGELLDRGWVPDATTYTVLMDGYCRLG 282

Query: 860  NLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRL 1039
               EA+K+   M + GV   ++TY ++IE  C + +  EAL LF +++++  +   SS L
Sbjct: 283  KFSEAVKVMDEMEENGVVPNEVTYGVMIEAFCKEKKSGEALNLFDDMLERKYI--PSSSL 340

Query: 1040 CCVVLGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETLIHWLFKIGDIKKGKRLFQDMC 1219
            CC V+  +C  G+VEE   LW+++L   CLP + +  TLIHWL K G + + +++F +  
Sbjct: 341  CCKVIDVLCDEGKVEEGCYLWKKMLKNDCLPDNAILSTLIHWLCKKGKVWEARKMFDEFE 400

Query: 1220 NQDVATVSGYNVMIRGLCEVGQLQEACKVWDGMLMTDLVPDESSYAWLILGFCQGGMAKE 1399
               V ++  YN +I G+CE G+L EA K+WD M+     P+  +Y  LI GFC+ G   E
Sbjct: 401  KGSVPSLLTYNTLINGMCERGELNEAGKLWDDMVEKGCNPNVFTYNMLIKGFCKMGNVME 460

Query: 1400 GVEILLDMMLSMDLVPDVSLFRKVMPGFSKLSSE 1501
            G+ I L+ ML     P+   +  ++ G   +  E
Sbjct: 461  GIRI-LEEMLDKGCFPNKVTYSVLIEGLQDMGKE 493



 Score = 92.4 bits (228), Expect = 5e-16
 Identities = 72/274 (26%), Positives = 133/274 (48%)
 Frame = +2

Query: 293  TYLKIIERLLGELEFTKVEEVLGQLRKENFYPSESIFIRVIRGYGYANKPDEAEHMFRTI 472
            TY  +++      +F++  +V+ ++ +    P+E  +  +I  +    K  EA ++F  +
Sbjct: 270  TYTVLMDGYCRLGKFSEAVKVMDEMEENGVVPNEVTYGVMIEAFCKEKKSGEALNLFDDM 329

Query: 473  PLYRRCKQSHATFNVLLSVLFSTGNYDRVYNLYHSCGTFGLRPNVMSCNMLIKSLCKQGY 652
             L R+   S +    ++ VL   G  +    L+         P+    + LI  LCK+G 
Sbjct: 330  -LERKYIPSSSLCCKVIDVLCDEGKVEEGCYLWKKMLKNDCLPDNAILSTLIHWLCKKGK 388

Query: 653  LALAKQVYANMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNS 832
            +  A++++    + G  P+ +TY  L+ G CE G++  A K++D  + KG       YN 
Sbjct: 389  VWEARKMFDEFEK-GSVPSLLTYNTLINGMCERGELNEAGKLWDDMVEKGCNPNVFTYNM 447

Query: 833  LIDGYCKAGNLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKW 1012
            LI G+CK GN+ E ++I + M DKG     +TY++LIEGL D  +  E  ++    + + 
Sbjct: 448  LIKGFCKMGNVMEGIRILEEMLDKGCFPNKVTYSVLIEGLQDMGKEGEVGKVVSMAMSRG 507

Query: 1013 NVFQESSRLCCVVLGGMCKVGRVEEAVKLWEELL 1114
             V   S  L    +     VG+++  V + ++LL
Sbjct: 508  RVDGSSWDLFLTKI-----VGKLDSGVDVLDQLL 536


>gb|EXC20587.1| hypothetical protein L484_027142 [Morus notabilis]
          Length = 531

 Score =  305 bits (781), Expect = 3e-80
 Identities = 168/454 (37%), Positives = 252/454 (55%), Gaps = 1/454 (0%)
 Frame = +2

Query: 143  TVRPPIEDWPVHLYPRLLYNIIKKAESTKLALTIFNYAGKHHYNYRHSSLTYLKIIERLL 322
            TV PPI+ WP  LYP+ L +I+ + ++  LAL IF +AG  H  + H+  TY  II RL 
Sbjct: 37   TVTPPIKPWPQRLYPKRLVSILTRQQNLDLALQIFRHAGDFHPGFSHNYDTYHTIIRRLS 96

Query: 323  GELEFTKVEEVLGQLRKENFYPSESIFIRVIRGYGYANKPDEAEHMFRTIPLYRRCKQSH 502
                F  VE +L +L K      E +FI VIR YG A +P  +   F  I  +   + S 
Sbjct: 97   HAHAFEAVESLLSELHKSRIRCGEDLFIAVIRSYGLAGRPKWSLKTFLRIQNFG-VQCSV 155

Query: 503  ATFNVLLSVLFSTGNYDRVYNLYHSCGT-FGLRPNVMSCNMLIKSLCKQGYLALAKQVYA 679
             + N LL+ L     YD V  ++ +C + FG+ PNV +CN+LIK+LC +  +  A++V  
Sbjct: 156  RSLNCLLNALVQNKRYDLVRWVFENCQSKFGVVPNVFTCNILIKALCNKNDMEGARRVLD 215

Query: 680  NMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNSLIDGYCKAG 859
             MP +G  P  VTY  +M GH   GDM  A+++F   L +G L   + Y  L+DGY K G
Sbjct: 216  EMPAMGMVPNVVTYTTIMGGHVSRGDMVGAKRVFGEILDRGWLPDATTYTILMDGYVKIG 275

Query: 860  NLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRL 1039
             L +A+K+   M + GV   D+TY ++IE  C  N+  EAL L  ++++    +  SS L
Sbjct: 276  RLADAIKVMDEMEENGVLPNDVTYGVMIEAYCKGNKSGEALNLLEDMLE--GKYIPSSAL 333

Query: 1040 CCVVLGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETLIHWLFKIGDIKKGKRLFQDMC 1219
            CC V+  +C+ G+VE+A +LW+ LL   C P + +  TLI+WL K G + + ++LF    
Sbjct: 334  CCKVIDVLCQQGKVEDACELWKRLLKNNCTPDNAISSTLIYWLCKKGKVWEARKLFDQFE 393

Query: 1220 NQDVATVSGYNVMIRGLCEVGQLQEACKVWDGMLMTDLVPDESSYAWLILGFCQGGMAKE 1399
               + ++  YN +I G+CE G+L EA ++WD M+     P+  +Y  LI GFC  G A+E
Sbjct: 394  KGSIPSILTYNTLIAGMCEEGELCEAGRLWDDMVEKGCAPNSFTYNMLIKGFCNTGKAEE 453

Query: 1400 GVEILLDMMLSMDLVPDVSLFRKVMPGFSKLSSE 1501
            G+ I L+ ML     P  S +  ++ G  +   E
Sbjct: 454  GIRI-LEEMLCKGCSPGKSTYGMLIDGLRRKEGE 486


>ref|XP_006491330.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
            mitochondrial-like [Citrus sinensis]
          Length = 571

 Score =  298 bits (764), Expect = 3e-78
 Identities = 168/455 (36%), Positives = 263/455 (57%), Gaps = 2/455 (0%)
 Frame = +2

Query: 143  TVRPPIEDWPVHLYPRLLYNIIKKAESTKLALTIFNYAGKHHYNYRHSSLTYLKIIERLL 322
            TV PPI+ WP  LYP+ L ++I + ++  LAL IF+YAGK H N+ H+  TY  II +L 
Sbjct: 74   TVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLA 133

Query: 323  GELEFTKVEEVLGQLRKE-NFYPSESIFIRVIRGYGYANKPDEAEHMFRTIPLYRRCKQS 499
                F  VE +L +L++       E++FI VIR YG A +P+ A   F  I  +   ++S
Sbjct: 134  RARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFN-VQRS 192

Query: 500  HATFNVLLSVLFSTGNYDRVYNLY-HSCGTFGLRPNVMSCNMLIKSLCKQGYLALAKQVY 676
              + N LL+ L     YD V+ ++ +S   F + PNV +CN+LIK+LCK+  +  A +V 
Sbjct: 193  VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 252

Query: 677  ANMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNSLIDGYCKA 856
              MP +G  P  VT+  ++ G+   GD+  A+++F   L +G +   + Y  L+DGY K 
Sbjct: 253  DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 312

Query: 857  GNLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSR 1036
            G L +A+K+   M D GVE  ++TY ++IE  C   +  EA  L  +++ +  V   SS 
Sbjct: 313  GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV--PSSA 370

Query: 1037 LCCVVLGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETLIHWLFKIGDIKKGKRLFQDM 1216
            LCC V+  +C+ G+VE+A +LW+ LL K C+P + +  T+IHWL K G I + K+LF + 
Sbjct: 371  LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 430

Query: 1217 CNQDVATVSGYNVMIRGLCEVGQLQEACKVWDGMLMTDLVPDESSYAWLILGFCQGGMAK 1396
                + ++  YN +I G+CE  +L EA ++WD M+   + P+  +Y  LI GFC+ G AK
Sbjct: 431  ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 490

Query: 1397 EGVEILLDMMLSMDLVPDVSLFRKVMPGFSKLSSE 1501
            EG+ I L+ ML     P+ + F  ++ G  +  +E
Sbjct: 491  EGIRI-LEEMLDKGCFPNKTSFSLLIEGLYESGNE 524



 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 60/228 (26%), Positives = 108/228 (47%)
 Frame = +2

Query: 293 TYLKIIERLLGELEFTKVEEVLGQLRKENFYPSESIFIRVIRGYGYANKPDEAEHMFRTI 472
           TY  +++  +     T   +V+ ++      P+E  +  +I  +    K  EA ++   +
Sbjct: 301 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 360

Query: 473 PLYRRCKQSHATFNVLLSVLFSTGNYDRVYNLYHSCGTFGLRPNVMSCNMLIKSLCKQGY 652
            L R+   S A    ++ +L   G  +    L+         P+    + +I  LCK+G 
Sbjct: 361 -LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 419

Query: 653 LALAKQVYANMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNS 832
           +  AK+++    R G  P+ +TY  L+ G CE+ ++  A +++D  + KG+      YN 
Sbjct: 420 IWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 478

Query: 833 LIDGYCKAGNLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDE 976
           LI G+CK GN  E ++I + M DKG      +++LLIEGL +     E
Sbjct: 479 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 526



 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 45/200 (22%), Positives = 92/200 (46%)
 Frame = +2

Query: 284 SSLTYLKIIERLLGELEFTKVEEVLGQLRKENFYPSESIFIRVIRGYGYANKPDEAEHMF 463
           + +TY  +IE      +  +   +L  + +  + PS ++  +VI       K ++A  ++
Sbjct: 333 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 392

Query: 464 RTIPLYRRCKQSHATFNVLLSVLFSTGNYDRVYNLYHSCGTFGLRPNVMSCNMLIKSLCK 643
           + + L + C   +A  + ++  L   G       L+      G  P++++ N LI  +C+
Sbjct: 393 KRL-LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCE 450

Query: 644 QGYLALAKQVYANMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSD 823
              L  A +++ +M   G  P   TY  L++G C+ G+     +I +  L KG     + 
Sbjct: 451 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 510

Query: 824 YNSLIDGYCKAGNLDEALKI 883
           ++ LI+G  ++GN  E  K+
Sbjct: 511 FSLLIEGLYESGNEGEVGKV 530


>ref|XP_006444781.1| hypothetical protein CICLE_v10024306mg [Citrus clementina]
            gi|557547043|gb|ESR58021.1| hypothetical protein
            CICLE_v10024306mg [Citrus clementina]
          Length = 537

 Score =  298 bits (764), Expect = 3e-78
 Identities = 168/455 (36%), Positives = 263/455 (57%), Gaps = 2/455 (0%)
 Frame = +2

Query: 143  TVRPPIEDWPVHLYPRLLYNIIKKAESTKLALTIFNYAGKHHYNYRHSSLTYLKIIERLL 322
            TV PPI+ WP  LYP+ L ++I + ++  LAL IF+YAGK H N+ H+  TY  II +L 
Sbjct: 30   TVTPPIKPWPQRLYPKRLVSMIFRQQNLDLALQIFHYAGKFHPNFSHNYDTYHSIIHKLA 89

Query: 323  GELEFTKVEEVLGQLRKE-NFYPSESIFIRVIRGYGYANKPDEAEHMFRTIPLYRRCKQS 499
                F  VE +L +L++       E++FI VIR YG A +P+ A   F  I  +   ++S
Sbjct: 90   RARAFDAVESLLTELKQNPEIKCGENLFITVIRNYGLAGRPELAVKTFLRIEKFN-VQRS 148

Query: 500  HATFNVLLSVLFSTGNYDRVYNLY-HSCGTFGLRPNVMSCNMLIKSLCKQGYLALAKQVY 676
              + N LL+ L     YD V+ ++ +S   F + PNV +CN+LIK+LCK+  +  A +V 
Sbjct: 149  VRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILIKALCKKDDVEGAIRVL 208

Query: 677  ANMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNSLIDGYCKA 856
              MP +G  P  VT+  ++ G+   GD+  A+++F   L +G +   + Y  L+DGY K 
Sbjct: 209  DEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKL 268

Query: 857  GNLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSR 1036
            G L +A+K+   M D GVE  ++TY ++IE  C   +  EA  L  +++ +  V   SS 
Sbjct: 269  GRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYV--PSSA 326

Query: 1037 LCCVVLGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETLIHWLFKIGDIKKGKRLFQDM 1216
            LCC V+  +C+ G+VE+A +LW+ LL K C+P + +  T+IHWL K G I + K+LF + 
Sbjct: 327  LCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEF 386

Query: 1217 CNQDVATVSGYNVMIRGLCEVGQLQEACKVWDGMLMTDLVPDESSYAWLILGFCQGGMAK 1396
                + ++  YN +I G+CE  +L EA ++WD M+   + P+  +Y  LI GFC+ G AK
Sbjct: 387  ERGSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAK 446

Query: 1397 EGVEILLDMMLSMDLVPDVSLFRKVMPGFSKLSSE 1501
            EG+ I L+ ML     P+ + F  ++ G  +  +E
Sbjct: 447  EGIRI-LEEMLDKGCFPNKTSFSLLIEGLYESGNE 480



 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 60/228 (26%), Positives = 108/228 (47%)
 Frame = +2

Query: 293 TYLKIIERLLGELEFTKVEEVLGQLRKENFYPSESIFIRVIRGYGYANKPDEAEHMFRTI 472
           TY  +++  +     T   +V+ ++      P+E  +  +I  +    K  EA ++   +
Sbjct: 257 TYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDM 316

Query: 473 PLYRRCKQSHATFNVLLSVLFSTGNYDRVYNLYHSCGTFGLRPNVMSCNMLIKSLCKQGY 652
            L R+   S A    ++ +L   G  +    L+         P+    + +I  LCK+G 
Sbjct: 317 -LQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGK 375

Query: 653 LALAKQVYANMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNS 832
           +  AK+++    R G  P+ +TY  L+ G CE+ ++  A +++D  + KG+      YN 
Sbjct: 376 IWEAKKLFDEFER-GSIPSLLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNM 434

Query: 833 LIDGYCKAGNLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDE 976
           LI G+CK GN  E ++I + M DKG      +++LLIEGL +     E
Sbjct: 435 LIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGE 482



 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 45/200 (22%), Positives = 92/200 (46%)
 Frame = +2

Query: 284 SSLTYLKIIERLLGELEFTKVEEVLGQLRKENFYPSESIFIRVIRGYGYANKPDEAEHMF 463
           + +TY  +IE      +  +   +L  + +  + PS ++  +VI       K ++A  ++
Sbjct: 289 NEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELW 348

Query: 464 RTIPLYRRCKQSHATFNVLLSVLFSTGNYDRVYNLYHSCGTFGLRPNVMSCNMLIKSLCK 643
           + + L + C   +A  + ++  L   G       L+      G  P++++ N LI  +C+
Sbjct: 349 KRL-LRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFER-GSIPSLLTYNTLIAGMCE 406

Query: 644 QGYLALAKQVYANMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSD 823
              L  A +++ +M   G  P   TY  L++G C+ G+     +I +  L KG     + 
Sbjct: 407 SAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTS 466

Query: 824 YNSLIDGYCKAGNLDEALKI 883
           ++ LI+G  ++GN  E  K+
Sbjct: 467 FSLLIEGLYESGNEGEVGKV 486


>gb|EMJ21218.1| hypothetical protein PRUPE_ppa003879mg [Prunus persica]
          Length = 542

 Score =  296 bits (757), Expect = 2e-77
 Identities = 164/468 (35%), Positives = 259/468 (55%), Gaps = 2/468 (0%)
 Frame = +2

Query: 143  TVRPPIEDWPVHLYPRLLYNIIKKAESTKLALTIFNYAGKHHYNYRHSSLTYLKIIERLL 322
            TV PPIE WP  L+P+ L ++I +  +  LAL IF++A K H  + H+  TY  I+ RL 
Sbjct: 44   TVTPPIEPWPRRLHPKRLISLITRQPNLDLALQIFHHASKFHPGFSHNYHTYHAILNRLS 103

Query: 323  GELEF-TKVEEVLGQLRKENFYPSESIFIRVIRGYGYANKPDEAEHMFRTIPLYRRCKQS 499
                F  K++ +L  L       S+ +FI +IR +G   +P  +   F  IP +   ++S
Sbjct: 104  RSRAFHLKIDPLLSDLSNSGIKCSDDLFITLIRNFGVLGRPKLSFKTFLDIPKFG-AQRS 162

Query: 500  HATFNVLLSVLFSTGNYDRVYNLYHSCGT-FGLRPNVMSCNMLIKSLCKQGYLALAKQVY 676
              + N LL+ L     Y  V++++ +CG  FG+RPNV +CN+LIK+LC++  +  A +V 
Sbjct: 163  AKSLNALLNALVQNHEYGLVHSVFKNCGQRFGVRPNVFTCNILIKALCQKDDVETALKVL 222

Query: 677  ANMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNSLIDGYCKA 856
              MP +GF P  VTY  ++ G+   GDM  A+++F   L +G     + Y  L+DG+ K 
Sbjct: 223  DEMPAMGFVPDVVTYTTVLGGYVSRGDMVGAKRVFGEVLDRGWHPDATTYTILMDGFVKQ 282

Query: 857  GNLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSR 1036
            G L +A+K+   M +  V   ++TY ++IE  C   +  EA+ L  ++I+K  V   SS 
Sbjct: 283  GKLVDAVKVMDEMEENKVGPNEVTYGVMIEAYCKAKKSGEAVNLLNDMIEKRYV--PSSA 340

Query: 1037 LCCVVLGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETLIHWLFKIGDIKKGKRLFQDM 1216
            LCC V+  +C  G+ E+  +LW+ LL   C P + +  TLI+WL K G + + K+LF  +
Sbjct: 341  LCCKVIDVLCHEGKAEDGCELWKRLLKNNCTPDNAISSTLIYWLCKEGKVWEAKKLFDQL 400

Query: 1217 CNQDVATVSGYNVMIRGLCEVGQLQEACKVWDGMLMTDLVPDESSYAWLILGFCQGGMAK 1396
                +  V  YN++I GLCEVG+L EA ++WD M+     P+  +Y  LI GFC+ G A+
Sbjct: 401  KTDLIPGVMTYNMLIAGLCEVGELCEAGRLWDDMVEKGCAPNAFTYNMLIKGFCKIGKAE 460

Query: 1397 EGVEILLDMMLSMDLVPDVSLFRKVMPGFSKLSSEQACTLLEEILYRN 1540
            EG+  +L+ ML    +P  S +  ++ G   L  E   T +  +   N
Sbjct: 461  EGIR-MLEEMLDKGCLPTKSTYGMLIEGLCDLRKEDEVTKVISLAMSN 507


>ref|XP_006287468.1| hypothetical protein CARUB_v10000680mg [Capsella rubella]
            gi|482556174|gb|EOA20366.1| hypothetical protein
            CARUB_v10000680mg [Capsella rubella]
          Length = 533

 Score =  294 bits (753), Expect = 6e-77
 Identities = 160/462 (34%), Positives = 258/462 (55%), Gaps = 5/462 (1%)
 Frame = +2

Query: 134  KRPTVRPPIEDWPVHLYPRLLYNIIKKAESTKLALTIFNYAGKHHYNYRHSSLTYLKIIE 313
            K  T +PPI+ WP  L+P+ L ++I + ++  LAL IF YAGK H  + H+  TY  I+ 
Sbjct: 30   KYSTEKPPIKPWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILF 89

Query: 314  RLLGELEFTKVEEVLGQLRKENFYP----SESIFIRVIRGYGYANKPDEAEHMFRTIPLY 481
            +L     F  VE ++  LR  N YP     E++FI ++R YG A + + +  +F  IP +
Sbjct: 90   KLSRARAFDPVESLMADLR--NSYPPIRCGENLFIDLLRNYGLAGRYEASVRIFLRIPDF 147

Query: 482  RRCKQSHATFNVLLSVLFSTGNYDRVYNLY-HSCGTFGLRPNVMSCNMLIKSLCKQGYLA 658
               K+S  + N LL+VL     +D V+ ++ +S  +FG+ PN+ +CN+L+K+LCK+  + 
Sbjct: 148  G-VKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIE 206

Query: 659  LAKQVYANMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNSLI 838
             A +V   +P +G  P  VTY  ++ G+   GDM  A+++    L +G     + Y  L+
Sbjct: 207  SAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMEAAKRVLGEMLDRGWYPDATTYTVLM 266

Query: 839  DGYCKAGNLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNV 1018
            DGYCK G   EA  +   M    VE  ++TY ++I GLC + +  EA  +F E++DK   
Sbjct: 267  DGYCKLGRFSEAATVMDEMEKNEVEPNEVTYGVMIRGLCKEKKSGEARNMFDEMLDK--S 324

Query: 1019 FQESSRLCCVVLGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETLIHWLFKIGDIKKGK 1198
            F   S LCC V+  +C+  +V+EA  LW ++L   C+P + +  TLIHWL K G + + +
Sbjct: 325  FMPDSSLCCKVIDALCEDHKVDEACALWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEAR 384

Query: 1199 RLFQDMCNQDVATVSGYNVMIRGLCEVGQLQEACKVWDGMLMTDLVPDESSYAWLILGFC 1378
            +LF +     + ++  +N +I G+CE G+L EA ++WD M+     P+  +Y  LI G  
Sbjct: 385  KLFDEFEKGSIPSLLTFNTLISGMCEKGELTEAGRLWDDMVERKCKPNAFTYNVLIEGLS 444

Query: 1379 QGGMAKEGVEILLDMMLSMDLVPDVSLFRKVMPGFSKLSSEQ 1504
            + G  KEGV + L+ ML     P+ + F  +  G  +L  E+
Sbjct: 445  KNGNVKEGVRV-LEEMLENGCFPNKTTFLILFEGIQELGKEE 485



 Score = 78.6 bits (192), Expect = 7e-12
 Identities = 62/274 (22%), Positives = 126/274 (45%)
 Frame = +2

Query: 293  TYLKIIERLLGELEFTKVEEVLGQLRKENFYPSESIFIRVIRGYGYANKPDEAEHMFRTI 472
            TY  +++       F++   V+ ++ K    P+E  +  +IRG     K  EA +MF  +
Sbjct: 261  TYTVLMDGYCKLGRFSEAATVMDEMEKNEVEPNEVTYGVMIRGLCKEKKSGEARNMFDEM 320

Query: 473  PLYRRCKQSHATFNVLLSVLFSTGNYDRVYNLYHSCGTFGLRPNVMSCNMLIKSLCKQGY 652
             L +      +    ++  L      D    L+         P+    + LI  LCK+G 
Sbjct: 321  -LDKSFMPDSSLCCKVIDALCEDHKVDEACALWRKMLKNNCMPDNALLSTLIHWLCKEGR 379

Query: 653  LALAKQVYANMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNS 832
            ++ A++++    + G  P+ +T+  L+ G CE G++  A +++D  + +        YN 
Sbjct: 380  VSEARKLFDEFEK-GSIPSLLTFNTLISGMCEKGELTEAGRLWDDMVERKCKPNAFTYNV 438

Query: 833  LIDGYCKAGNLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKW 1012
            LI+G  K GN+ E +++ + M + G      T+ +L EG+ +  + ++A+++    + + 
Sbjct: 439  LIEGLSKNGNVKEGVRVLEEMLENGCFPNKTTFLILFEGIQELGKEEDAIKVVSMAVMRG 498

Query: 1013 NVFQESSRLCCVVLGGMCKVGRVEEAVKLWEELL 1114
             V +ES  L           G +++ V + +ELL
Sbjct: 499  KVDKESWELFLKKF-----AGELDKGVLVLKELL 527


>ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g16420, mitochondrial; Flags: Precursor
            gi|9759124|dbj|BAB09609.1| salt-inducible protein-like
            [Arabidopsis thaliana] gi|332004907|gb|AED92290.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 535

 Score =  292 bits (747), Expect = 3e-76
 Identities = 157/459 (34%), Positives = 258/459 (56%), Gaps = 5/459 (1%)
 Frame = +2

Query: 143  TVRPPIEDWPVHLYPRLLYNIIKKAESTKLALTIFNYAGKHHYNYRHSSLTYLKIIERLL 322
            T +PPI+ WP  L+P+ L ++I + ++  LAL IF YAGK H  + H+  TY  I+ +L 
Sbjct: 35   TEKPPIKPWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLS 94

Query: 323  GELEFTKVEEVLGQLRKENFYP----SESIFIRVIRGYGYANKPDEAEHMFRTIPLYRRC 490
                F  VE ++  LR  N YP     E++FI ++R YG A + + +  +F  IP +   
Sbjct: 95   RARAFDPVESLMADLR--NSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFG-V 151

Query: 491  KQSHATFNVLLSVLFSTGNYDRVYNLY-HSCGTFGLRPNVMSCNMLIKSLCKQGYLALAK 667
            K+S  + N LL+VL     +D V+ ++ +S  +FG+ PN+ +CN+L+K+LCK+  +  A 
Sbjct: 152  KRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAY 211

Query: 668  QVYANMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNSLIDGY 847
            +V   +P +G  P  VTY  ++ G+   GDM  A+++ +  L +G     + Y  L+DGY
Sbjct: 212  KVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGY 271

Query: 848  CKAGNLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQE 1027
            CK G   EA  +  +M    +E  ++TY ++I  LC + +  EA  +F E++++   F  
Sbjct: 272  CKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLER--SFMP 329

Query: 1028 SSRLCCVVLGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETLIHWLFKIGDIKKGKRLF 1207
             S LCC V+  +C+  +V+EA  LW ++L   C+P + +  TLIHWL K G + + ++LF
Sbjct: 330  DSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLF 389

Query: 1208 QDMCNQDVATVSGYNVMIRGLCEVGQLQEACKVWDGMLMTDLVPDESSYAWLILGFCQGG 1387
             +     + ++  YN +I G+CE G+L EA ++WD M      P+  +Y  LI G  + G
Sbjct: 390  DEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNG 449

Query: 1388 MAKEGVEILLDMMLSMDLVPDVSLFRKVMPGFSKLSSEQ 1504
              KEGV + L+ ML +   P+ + F  +  G  KL  E+
Sbjct: 450  NVKEGVRV-LEEMLEIGCFPNKTTFLILFEGLQKLGKEE 487



 Score = 75.9 bits (185), Expect = 4e-11
 Identities = 66/280 (23%), Positives = 119/280 (42%)
 Frame = +2

Query: 293  TYLKIIERLLGELEFTKVEEVLGQLRKENFYPSESIFIRVIRGYGYANKPDEAEHMFRTI 472
            TY  +++       F++   V+  + K    P+E  +  +IR      K  EA +MF  +
Sbjct: 263  TYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEM 322

Query: 473  PLYRRCKQSHATFNVLLSVLFSTGNYDRVYNLYHSCGTFGLRPNVMSCNMLIKSLCKQGY 652
             L R      +    ++  L      D    L+         P+    + LI  LCK+G 
Sbjct: 323  -LERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGR 381

Query: 653  LALAKQVYANMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNS 832
            +  A++++    + G  P+ +TY  L+ G CE G++  A +++D    +        YN 
Sbjct: 382  VTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNV 440

Query: 833  LIDGYCKAGNLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKW 1012
            LI+G  K GN+ E +++ + M + G      T+ +L EGL    + ++A+++    +   
Sbjct: 441  LIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG 500

Query: 1013 NVFQESSRLCCVVLGGMCKVGRVEEAVKLWEELLDKGCLP 1132
             V +ES  L                 +K +   LDKG LP
Sbjct: 501  KVDKESWEL----------------FLKKFAGELDKGVLP 524


>ref|XP_006339749.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
            mitochondrial-like [Solanum tuberosum]
          Length = 564

 Score =  291 bits (744), Expect = 7e-76
 Identities = 165/456 (36%), Positives = 257/456 (56%), Gaps = 3/456 (0%)
 Frame = +2

Query: 143  TVRPPIEDWPVHLYPRLLYNIIKKAESTKLALTIFNYAGKHHYNYRHSSLTYLKIIERLL 322
            TV PPI+ WP +L  + L +++K      L+L IF++AG  H  + H+  TY  II +L 
Sbjct: 68   TVTPPIKPWPRYLSHKNLISLVKSQHDVNLSLQIFHHAGNFHPGFFHNYETYHSIINKLC 127

Query: 323  GELEFTKVEEVLGQLRKENFYPSESIFIRVIRGYGYANKPDEAEHMFRTIPLYRRCKQSH 502
                F KVE +L +LR       E +FI VIR YG A+KP  A   F  I  +   ++S 
Sbjct: 128  RARVFDKVETLLAELRNSTIKCGEVLFINVIRNYGIASKPKLALKTFLRIEKFG-VQRSV 186

Query: 503  ATFNVLLSVLFSTGNYDRVYNLY-HSCGTFGLRPNVMSCNMLIKSLCKQGYLALAKQVYA 679
             +FN LL+ L     YD VY L+ +S     + P+V +CN+L+ +LCK+  +  A +V  
Sbjct: 187  RSFNALLNALVQNKEYDFVYALFKNSQKKLHITPSVFTCNILLNALCKKDDINSAIKVLD 246

Query: 680  NMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNSLIDGYCKAG 859
             MP +G  P  V+Y  ++  +   GD+  A+++FD  + +G L   + Y  L+ GY K G
Sbjct: 247  EMPVMGIIPNVVSYTTILGCYVSLGDLVGAKRMFDEIVDRGWLPDATTYTILMHGYAKQG 306

Query: 860  NLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRL 1039
               +A KI   M D G+   ++TY ++IE  C + +  EA+ L  +++DK  +   S  L
Sbjct: 307  KFIDAAKIMDEMEDNGIGPNEVTYGIMIEAFCKETKSGEAINLLNDMLDKRYI--PSPTL 364

Query: 1040 CCVVLGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETLIHWLFKIGDIKKGKRLFQDMC 1219
            C  V+  +C+ G+VEEA  LW++LL K C P + +  TLIHWL K G I++ ++LF +  
Sbjct: 365  CSKVIDVLCEEGKVEEACDLWKKLLVKNCTPDNTILSTLIHWLCKKGQIREARKLFDEFE 424

Query: 1220 NQDVATVSGYNVMIRGLCEVGQLQEACKVWDGMLMTDLVPDESSYAWLILGFCQGGMAKE 1399
                 +V  YN++I G+CE G+L EA ++WD M+    VP+  +Y  LI GFC+ G AKE
Sbjct: 425  KSSSPSVLTYNMLIAGMCEKGKLHEAGRLWDDMVDKGCVPNAFTYNMLIKGFCKVGNAKE 484

Query: 1400 GVEILLDMMLSMDLVPDVSLFRKVMPGF--SKLSSE 1501
            G+ + L+ ML     P+ S +  ++ G   S+L++E
Sbjct: 485  GIRV-LEEMLDKGCHPNKSTYSILIKGLLDSELNAE 519



 Score = 89.0 bits (219), Expect = 5e-15
 Identities = 59/232 (25%), Positives = 110/232 (47%)
 Frame = +2

Query: 293 TYLKIIERLLGELEFTKVEEVLGQLRKENFYPSESIFIRVIRGYGYANKPDEAEHMFRTI 472
           TY  ++     + +F    +++ ++      P+E  +  +I  +    K  EA ++   +
Sbjct: 294 TYTILMHGYAKQGKFIDAAKIMDEMEDNGIGPNEVTYGIMIEAFCKETKSGEAINLLNDM 353

Query: 473 PLYRRCKQSHATFNVLLSVLFSTGNYDRVYNLYHSCGTFGLRPNVMSCNMLIKSLCKQGY 652
            L +R   S    + ++ VL   G  +   +L+         P+    + LI  LCK+G 
Sbjct: 354 -LDKRYIPSPTLCSKVIDVLCEEGKVEEACDLWKKLLVKNCTPDNTILSTLIHWLCKKGQ 412

Query: 653 LALAKQVYANMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNS 832
           +  A++++    +   +P+ +TY  L+ G CE G +  A +++D  + KG +     YN 
Sbjct: 413 IREARKLFDEFEKSS-SPSVLTYNMLIAGMCEKGKLHEAGRLWDDMVDKGCVPNAFTYNM 471

Query: 833 LIDGYCKAGNLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALEL 988
           LI G+CK GN  E +++ + M DKG      TY++LI+GL D     E L +
Sbjct: 472 LIKGFCKVGNAKEGIRVLEEMLDKGCHPNKSTYSILIKGLLDSELNAEVLRV 523


>ref|XP_002317747.2| hypothetical protein POPTR_0012s01390g, partial [Populus trichocarpa]
            gi|550326138|gb|EEE95967.2| hypothetical protein
            POPTR_0012s01390g, partial [Populus trichocarpa]
          Length = 515

 Score =  290 bits (742), Expect = 1e-75
 Identities = 167/456 (36%), Positives = 249/456 (54%), Gaps = 3/456 (0%)
 Frame = +2

Query: 143  TVRPPIEDWPVHLYPRLLYNIIKKAESTKLALTIFNYAGKHHYNYRHSSLTYLKIIERLL 322
            TV PPI+ WP  LYP+ L ++I   E+  LA  IF+YAGK+H  + H+  TY  II++L 
Sbjct: 45   TVTPPIKPWPQRLYPKRLISMITHQENLDLAFQIFDYAGKYHPGFSHTYDTYHSIIDKLS 104

Query: 323  GELEFTKVEEVLGQLRKENFYPS--ESIFIRVIRGYGYANKPDEAEHMFRTIPLYRRCKQ 496
                F  VE +L QL + + +    + +FI VIR YG A         F   P       
Sbjct: 105  RARAFDGVESLLSQLSRNSSHIKCGDDVFISVIRNYGLAE--------FSMQP------- 149

Query: 497  SHATFNVLLSVLFSTGNYDRVYNLYHSC-GTFGLRPNVMSCNMLIKSLCKQGYLALAKQV 673
            S    N LL+V      Y  V +   +C   +G+ PNV S N+LIK+LCK+  +  A +V
Sbjct: 150  SVKLLNTLLNVFVQNKRYHLVGSTLKNCKDKYGVLPNVFSFNILIKALCKKNDVENALKV 209

Query: 674  YANMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNSLIDGYCK 853
            +  MP +G  P  VTY  ++ G    GD+  A K+F     KG L   + Y  L+ GYCK
Sbjct: 210  FDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYCK 269

Query: 854  AGNLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESS 1033
             G L +A+K+  NM   GVE  ++TY ++I+  C + +  EA  L  +++DK   F  SS
Sbjct: 270  QGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDK--KFLPSS 327

Query: 1034 RLCCVVLGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETLIHWLFKIGDIKKGKRLFQD 1213
             LCC V+  +C+ G+VE A  LW+ +L+K CLP + +  TLIHWL K G + + ++LF +
Sbjct: 328  TLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDE 387

Query: 1214 MCNQDVATVSGYNVMIRGLCEVGQLQEACKVWDGMLMTDLVPDESSYAWLILGFCQGGMA 1393
                 + ++  YN +I G+CE G+L EA ++WD M+     P+  +Y  LI GF + G+ 
Sbjct: 388  FEQGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGVV 447

Query: 1394 KEGVEILLDMMLSMDLVPDVSLFRKVMPGFSKLSSE 1501
            KEGV I L+ ML    +P+ S +  ++ G  +   E
Sbjct: 448  KEGVRI-LEEMLDNGCLPNKSTYTLLIEGLQESGME 482


>ref|XP_004230006.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
            mitochondrial-like [Solanum lycopersicum]
          Length = 561

 Score =  290 bits (742), Expect = 1e-75
 Identities = 161/456 (35%), Positives = 256/456 (56%), Gaps = 3/456 (0%)
 Frame = +2

Query: 143  TVRPPIEDWPVHLYPRLLYNIIKKAESTKLALTIFNYAGKHHYNYRHSSLTYLKIIERLL 322
            TV PPI+ WP +L  + L +++K      L+L IF++AG  H  + H+  TY  I+ +L 
Sbjct: 65   TVTPPIKPWPRYLSHKNLISLVKSQHDVNLSLQIFHHAGNFHPGFFHNYETYHSILNKLC 124

Query: 323  GELEFTKVEEVLGQLRKENFYPSESIFIRVIRGYGYANKPDEAEHMFRTIPLYRRCKQSH 502
                F KVE +L +LR       E +F+ VIR YG A KP  A   F  I  +   ++S 
Sbjct: 125  RARAFDKVETLLTELRNSGIKCGEVLFVNVIRNYGIAGKPKLALKTFLRIEKFG-VQRSV 183

Query: 503  ATFNVLLSVLFSTGNYDRVYNLYHSCGT-FGLRPNVMSCNMLIKSLCKQGYLALAKQVYA 679
             +FN LL+ L     YD VY L+ +C     + P+V +CN+L+ +LCK+  +  A +V  
Sbjct: 184  RSFNALLNALVQNKEYDFVYALFKNCQKKLHITPSVFTCNILLNALCKKDDINSATKVLD 243

Query: 680  NMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNSLIDGYCKAG 859
             MP +G  P  V+Y  ++  +   GD+  A+++FD  + +G L   + Y  L+ GY K G
Sbjct: 244  EMPVMGIVPNVVSYTTILGCYVSLGDLLGAKRMFDEIVDRGWLPDATTYTILMHGYVKQG 303

Query: 860  NLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSRL 1039
               +A KI   M D G+   ++TY ++IE  C + +  EA+ L  +++DK  +   S  L
Sbjct: 304  KFIDAAKIMDEMDDNGIGPNEVTYGIMIEAFCKEKKSGEAVNLLNDMLDKRYI--PSPTL 361

Query: 1040 CCVVLGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETLIHWLFKIGDIKKGKRLFQDMC 1219
            C  V+  +C+ G+VEEA  LW++LL K C P + +  TL+HWL K G I++ ++LF +  
Sbjct: 362  CSKVIDVLCEEGKVEEACDLWKKLLVKNCTPDNTISSTLVHWLCKKGQIREARKLFDEFE 421

Query: 1220 NQDVATVSGYNVMIRGLCEVGQLQEACKVWDGMLMTDLVPDESSYAWLILGFCQGGMAKE 1399
                 +V  YN++I G+CE G+L EA ++WD M+    +P+  +Y  LI GFC+ G AKE
Sbjct: 422  KSSSPSVLTYNMLIAGMCEKGELHEAGRLWDDMVDKGCIPNAFTYNMLIKGFCKVGNAKE 481

Query: 1400 GVEILLDMMLSMDLVPDVSLFRKVMPGF--SKLSSE 1501
            G+ + L+ ML     P+ S +  ++ G   S+L++E
Sbjct: 482  GIRV-LEEMLDKGCHPNKSTYSILIKGLLDSELNAE 516



 Score = 90.1 bits (222), Expect = 2e-15
 Identities = 58/232 (25%), Positives = 112/232 (48%)
 Frame = +2

Query: 293 TYLKIIERLLGELEFTKVEEVLGQLRKENFYPSESIFIRVIRGYGYANKPDEAEHMFRTI 472
           TY  ++   + + +F    +++ ++      P+E  +  +I  +    K  EA ++   +
Sbjct: 291 TYTILMHGYVKQGKFIDAAKIMDEMDDNGIGPNEVTYGIMIEAFCKEKKSGEAVNLLNDM 350

Query: 473 PLYRRCKQSHATFNVLLSVLFSTGNYDRVYNLYHSCGTFGLRPNVMSCNMLIKSLCKQGY 652
            L +R   S    + ++ VL   G  +   +L+         P+    + L+  LCK+G 
Sbjct: 351 -LDKRYIPSPTLCSKVIDVLCEEGKVEEACDLWKKLLVKNCTPDNTISSTLVHWLCKKGQ 409

Query: 653 LALAKQVYANMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNS 832
           +  A++++    +   +P+ +TY  L+ G CE G++  A +++D  + KG +     YN 
Sbjct: 410 IREARKLFDEFEKSS-SPSVLTYNMLIAGMCEKGELHEAGRLWDDMVDKGCIPNAFTYNM 468

Query: 833 LIDGYCKAGNLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALEL 988
           LI G+CK GN  E +++ + M DKG      TY++LI+GL D     E L +
Sbjct: 469 LIKGFCKVGNAKEGIRVLEEMLDKGCHPNKSTYSILIKGLLDSELNAEILRV 520


>ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297317554|gb|EFH47976.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 533

 Score =  290 bits (741), Expect = 1e-75
 Identities = 157/459 (34%), Positives = 255/459 (55%), Gaps = 5/459 (1%)
 Frame = +2

Query: 143  TVRPPIEDWPVHLYPRLLYNIIKKAESTKLALTIFNYAGKHHYNYRHSSLTYLKIIERLL 322
            T +P I+ WP  L+P+ L ++I + ++  LAL IF YAGK H  + H+  TY  I+ +L 
Sbjct: 33   TEKPTIKPWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLS 92

Query: 323  GELEFTKVEEVLGQLRKENFYP----SESIFIRVIRGYGYANKPDEAEHMFRTIPLYRRC 490
                F  VE ++  LR  N YP     E++FI ++R YG A + + +  +F  IP +   
Sbjct: 93   RARAFDPVESLMADLR--NSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFG-V 149

Query: 491  KQSHATFNVLLSVLFSTGNYDRVYNLY-HSCGTFGLRPNVMSCNMLIKSLCKQGYLALAK 667
            K+S  + N LL+VL     +D V+ ++ +S  +FG+ PN+ +CN+L+K+LCK+  +  A 
Sbjct: 150  KRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAY 209

Query: 668  QVYANMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNSLIDGY 847
            +V   +P +G  P  VTY  ++ G+   GDM  A+++ +  L +G       Y  L+DGY
Sbjct: 210  KVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGY 269

Query: 848  CKAGNLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQE 1027
            CK G   EA  +  +M    +E  ++TY ++I  LC + +  EA  +F E++D+   F  
Sbjct: 270  CKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDR--SFMP 327

Query: 1028 SSRLCCVVLGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETLIHWLFKIGDIKKGKRLF 1207
             S LCC V+  +C+  +V+EA  LW ++L   C+P + +  TLIHWL K G + + ++LF
Sbjct: 328  DSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLF 387

Query: 1208 QDMCNQDVATVSGYNVMIRGLCEVGQLQEACKVWDGMLMTDLVPDESSYAWLILGFCQGG 1387
             +     + ++  YN +I G+CE G+L EA ++WD M      P+  +Y  LI G  + G
Sbjct: 388  DEFDKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNG 447

Query: 1388 MAKEGVEILLDMMLSMDLVPDVSLFRKVMPGFSKLSSEQ 1504
              KEGV + L+ ML     P+ + F  +  G  KL  E+
Sbjct: 448  NVKEGVRV-LEEMLESGCFPNKTTFLILFEGLQKLGKEE 485



 Score = 79.3 bits (194), Expect = 4e-12
 Identities = 65/276 (23%), Positives = 123/276 (44%)
 Frame = +2

Query: 287  SLTYLKIIERLLGELEFTKVEEVLGQLRKENFYPSESIFIRVIRGYGYANKPDEAEHMFR 466
            ++TY  +++       F++   V+  + K    P+E  +  +IR      K  EA +MF 
Sbjct: 259  AITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFD 318

Query: 467  TIPLYRRCKQSHATFNVLLSVLFSTGNYDRVYNLYHSCGTFGLRPNVMSCNMLIKSLCKQ 646
             + L R      +    ++  L      D    L+         P+    + LI  LCK+
Sbjct: 319  EM-LDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKE 377

Query: 647  GYLALAKQVYANMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDY 826
            G ++ A++++    + G  P+ +TY  L+ G CE G++  A +++D    +        Y
Sbjct: 378  GRVSEARKLFDEFDK-GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTY 436

Query: 827  NSLIDGYCKAGNLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELID 1006
            N LI+G  K GN+ E +++ + M + G      T+ +L EGL    + ++A+++    + 
Sbjct: 437  NVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIVSMAVM 496

Query: 1007 KWNVFQESSRLCCVVLGGMCKVGRVEEAVKLWEELL 1114
               V +ES  L          VG +++ V   +ELL
Sbjct: 497  NGKVDKESWELFLNKF-----VGELDKGVLALKELL 527


>ref|XP_006400179.1| hypothetical protein EUTSA_v10013226mg [Eutrema salsugineum]
            gi|557101269|gb|ESQ41632.1| hypothetical protein
            EUTSA_v10013226mg [Eutrema salsugineum]
          Length = 530

 Score =  288 bits (738), Expect = 3e-75
 Identities = 156/459 (33%), Positives = 255/459 (55%), Gaps = 5/459 (1%)
 Frame = +2

Query: 143  TVRPPIEDWPVHLYPRLLYNIIKKAESTKLALTIFNYAGKHHYNYRHSSLTYLKIIERLL 322
            T +PPI+ WP  L+P+ L ++I + ++  LAL +F YAGK H  + H+  TY  I+ +L 
Sbjct: 30   TEKPPIKPWPQRLFPKRLVSMITQQQNIDLALQMFLYAGKSHPGFTHNYDTYHSILFKLS 89

Query: 323  GELEFTKVEEVLGQLRKENFYP----SESIFIRVIRGYGYANKPDEAEHMFRTIPLYRRC 490
                F  VE +L  LR    YP     E++FI ++R YG A + + +  +F  IP +   
Sbjct: 90   RARAFDPVEPLLADLRSS--YPPIKCGENLFIDLLRNYGLAGRYESSVRIFLRIPDFG-V 146

Query: 491  KQSHATFNVLLSVLFSTGNYDRVYNLYHSCG-TFGLRPNVMSCNMLIKSLCKQGYLALAK 667
            K+S  + N LL+VL     +D V+ ++ +C  +FG+ PN+ +CN+L+K+LCK+  +  A 
Sbjct: 147  KRSVRSLNTLLNVLIQNKRFDLVHAMFKNCKESFGITPNIFTCNLLVKALCKKNDIESAF 206

Query: 668  QVYANMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNSLIDGY 847
            +V   +P +G  P  VTY  ++ G+   GDM  A+++    + +G     + Y  L+DGY
Sbjct: 207  KVLDEIPAMGLVPNLVTYTTILGGYVARGDMEAAKRVLREMMDRGWDPDATTYTVLMDGY 266

Query: 848  CKAGNLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQE 1027
            CK G   EA  +  +M    +E  ++TY ++I  LC + +  EA  +  E+ID+   F  
Sbjct: 267  CKLGRFSEAAMVMDDMEKNEIEPNEVTYGVMIGALCKEKKAGEARNMLDEMIDR--SFVP 324

Query: 1028 SSRLCCVVLGGMCKVGRVEEAVKLWEELLDKGCLPHSDVYETLIHWLFKIGDIKKGKRLF 1207
             S LCC V+  +C+  +V+EA  LW ++L   C+P + +  TLIHWL K G + + ++LF
Sbjct: 325  DSSLCCKVIDALCEDHKVDEACSLWRKMLKNNCMPDNALLSTLIHWLCKDGRVSEARKLF 384

Query: 1208 QDMCNQDVATVSGYNVMIRGLCEVGQLQEACKVWDGMLMTDLVPDESSYAWLILGFCQGG 1387
             +     + ++  YN +I G+CE G+L EA ++WD M+     P+  +Y  LI G  + G
Sbjct: 385  DEFEKGSIPSLLTYNTLISGMCEKGELTEAGRLWDDMVERRCKPNAFTYNVLIEGLSKNG 444

Query: 1388 MAKEGVEILLDMMLSMDLVPDVSLFRKVMPGFSKLSSEQ 1504
              KEGV + L+ ML     P+ + F  +  G  KL  E+
Sbjct: 445  NVKEGVRV-LEEMLEKGCFPNKTTFLILFEGLQKLGKEE 482



 Score = 75.1 bits (183), Expect = 8e-11
 Identities = 63/274 (22%), Positives = 121/274 (44%)
 Frame = +2

Query: 293  TYLKIIERLLGELEFTKVEEVLGQLRKENFYPSESIFIRVIRGYGYANKPDEAEHMFRTI 472
            TY  +++       F++   V+  + K    P+E  +  +I       K  EA +M   +
Sbjct: 258  TYTVLMDGYCKLGRFSEAAMVMDDMEKNEIEPNEVTYGVMIGALCKEKKAGEARNMLDEM 317

Query: 473  PLYRRCKQSHATFNVLLSVLFSTGNYDRVYNLYHSCGTFGLRPNVMSCNMLIKSLCKQGY 652
             + R      +    ++  L      D   +L+         P+    + LI  LCK G 
Sbjct: 318  -IDRSFVPDSSLCCKVIDALCEDHKVDEACSLWRKMLKNNCMPDNALLSTLIHWLCKDGR 376

Query: 653  LALAKQVYANMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNS 832
            ++ A++++    + G  P+ +TY  L+ G CE G++  A +++D  + +        YN 
Sbjct: 377  VSEARKLFDEFEK-GSIPSLLTYNTLISGMCEKGELTEAGRLWDDMVERRCKPNAFTYNV 435

Query: 833  LIDGYCKAGNLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKW 1012
            LI+G  K GN+ E +++ + M +KG      T+ +L EGL    + ++A+++    +   
Sbjct: 436  LIEGLSKNGNVKEGVRVLEEMLEKGCFPNKTTFLILFEGLQKLGKEEDAIKIVSMAVMSG 495

Query: 1013 NVFQESSRLCCVVLGGMCKVGRVEEAVKLWEELL 1114
             V +ES  L           G +++ V + EELL
Sbjct: 496  KVDKESWELFLKKF-----AGELDKGVVVLEELL 524


>ref|XP_003623067.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355498082|gb|AES79285.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  265 bits (676), Expect = 5e-68
 Identities = 157/449 (34%), Positives = 247/449 (55%), Gaps = 4/449 (0%)
 Frame = +2

Query: 146  VRPPIEDWPVHLYPRLLYNIIKKAESTKLALTIFNYAGKHHYN-YRHSSLTYLKIIERLL 322
            ++PPI+ WP  L P+LL ++I +      +L IF +A  HH   + H+  TY  I  +L 
Sbjct: 36   IQPPIKPWPHRLNPKLLSSLISRQHDPHFSLQIFLHAQNHHKPPFSHNPQTYQAIFLKLS 95

Query: 323  GELEFTKVEEVLGQLRKENFYP-SESIFIRVIRGYGYANKPDEAEHMFRTIPLYRRCKQS 499
                F+++E +L  LR    +   E   + VIRGYG A KP  A   F  I  +   + S
Sbjct: 96   KFRCFSEIESLLAGLRSSPPHCCGEEPIVTVIRGYGLAGKPVRALKTFLRIESFG-IRPS 154

Query: 500  HATFNVLLSVLFSTGNYDRVYNLYHSCGT-FGLRPNVMSCNMLIKSLCKQGYLALAKQVY 676
              + N LL+ L     Y   + ++ +CG  F + PNV+SCN+L+K+LCK   + +A +V 
Sbjct: 155  VRSINALLNSLVQNKRYRLAFLVFKNCGERFRVLPNVVSCNILLKALCKGNEVEVAVKVL 214

Query: 677  ANMPRLGFAPTPVTYVALMEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNSLIDGYCKA 856
              MP +G  P  V+Y  ++ G    GDM  A K+F   L +G     + Y  L+DG+C+ 
Sbjct: 215  DEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLDRGWSPDVTSYTVLVDGFCRL 274

Query: 857  GNLDEALKIGKNMRDKGVEKLDLTYALLIEGLCDKNRFDEALELFYELIDKWNVFQESSR 1036
            G L +A+++   M D GVE  ++TY ++I+  C + +  EA+ L  ++I K  V    S 
Sbjct: 275  GKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVV--GSE 332

Query: 1037 LCCVVLGGMCKVGRVEEAVKLWEELLDKGC-LPHSDVYETLIHWLFKIGDIKKGKRLFQD 1213
            LCC V+  +C+ G VE+A ++W  +  K C L  + V  TLIHWL K G + + + +F +
Sbjct: 333  LCCKVVDLLCEEGNVEKACEMWRMVSRKNCGLNGAVVVSTLIHWLCKKGKVLEARNVFDE 392

Query: 1214 MCNQDVATVSGYNVMIRGLCEVGQLQEACKVWDGMLMTDLVPDESSYAWLILGFCQGGMA 1393
                 VA++  YN +I GLCE G+L EA ++WD M+   + P+  +Y  LI GFC+ G A
Sbjct: 393  FGKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNA 452

Query: 1394 KEGVEILLDMMLSMDLVPDVSLFRKVMPG 1480
            KEG+ + L+ ML    +P+ S +  ++ G
Sbjct: 453  KEGIRV-LEEMLENRCLPNKSTYTILIDG 480



 Score = 84.3 bits (207), Expect = 1e-13
 Identities = 77/337 (22%), Positives = 148/337 (43%), Gaps = 4/337 (1%)
 Frame = +2

Query: 194  LYNIIKKAESTKLALTIFNYAGKHHYNYRHSSLTYLKIIERLLGELEFTKVEEVLGQLRK 373
            L N + + +  +LA  +F   G+  +    + ++   +++ L    E     +VL ++  
Sbjct: 161  LLNSLVQNKRYRLAFLVFKNCGER-FRVLPNVVSCNILLKALCKGNEVEVAVKVLDEMPG 219

Query: 374  ENFYPSESIFIRVIRGYGYANKPDEAEHMFRTIPLYRRCKQSHATFNVLLSVLFSTGNYD 553
                P+   +  V+ G+ +    D A  +FR + L R       ++ VL+      G   
Sbjct: 220  MGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREV-LDRGWSPDVTSYTVLVDGFCRLGKLV 278

Query: 554  RVYNLYHSCGTFGLRPNVMSCNMLIKSLCKQGYLALAKQVYANMPRLGFAPTPVTYVALM 733
                +       G+ PN ++  ++I++ CK+     A  +  +M              ++
Sbjct: 279  DAIRVMDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELCCKVV 338

Query: 734  EGHCEAGDMAVARKIFDYTLRKGILLRPSDY-NSLIDGYCKAGNLDEALKIGKNMRDKGV 910
            +  CE G++  A +++    RK   L  +   ++LI   CK G + EA  +        V
Sbjct: 339  DLLCEEGNVEKACEMWRMVSRKNCGLNGAVVVSTLIHWLCKKGKVLEARNVFDEFGKGSV 398

Query: 911  EKLDLTYALLIEGLCDKNRFDEALELFYELIDKW---NVFQESSRLCCVVLGGMCKVGRV 1081
              L LTY  LI GLC+     EA  L+ ++++K    N F  +     +++ G CKVG  
Sbjct: 399  ASL-LTYNTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYN-----MLIKGFCKVGNA 452

Query: 1082 EEAVKLWEELLDKGCLPHSDVYETLIHWLFKIGDIKK 1192
            +E +++ EE+L+  CLP+   Y  LI  +  +G +K+
Sbjct: 453  KEGIRVLEEMLENRCLPNKSTYTILIDGILLLGGMKQ 489



 Score = 72.8 bits (177), Expect = 4e-10
 Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 12/224 (5%)
 Frame = +2

Query: 386  PSESIFIRVIRGYGYANKPDEAEHMFRTIPLYRRCKQSHATFNVLLSVLFSTGNYDRVYN 565
            P+E  +  +I+ Y    K  EA ++   +        S     V+  +L   GN ++   
Sbjct: 294  PNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELCCKVV-DLLCEEGNVEKACE 352

Query: 566  LYH-----SCGTFGLRPNVMSCNMLIKSLCKQGYLALAKQVYANMPRLGFAPTPVTYVAL 730
            ++      +CG  G     +  + LI  LCK+G +  A+ V+    + G   + +TY  L
Sbjct: 353  MWRMVSRKNCGLNG----AVVVSTLIHWLCKKGKVLEARNVFDEFGK-GSVASLLTYNTL 407

Query: 731  MEGHCEAGDMAVARKIFDYTLRKGILLRPSDYNSLIDGYCKAGNLDEALKIGKNMRDKGV 910
            + G CE G++  A +++D  + KG+      YN LI G+CK GN  E +++ + M +   
Sbjct: 408  IAGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEMLENRC 467

Query: 911  EKLDLTYALLIEGLCDKNRFDEALELFYEL-------IDKWNVF 1021
                 TY +LI+G+       + +     L        D WN+F
Sbjct: 468  LPNKSTYTILIDGILLLGGMKQEINKVVSLAMSTGVDADLWNIF 511