BLASTX nr result
ID: Ephedra28_contig00024891
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00024891
(452 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006842865.1| hypothetical protein AMTR_s00081p00160620 [A... 112 4e-23
ref|XP_006286416.1| hypothetical protein CARUB_v10002972mg [Caps... 111 1e-22
ref|NP_001145828.1| uncharacterized protein LOC100279335 [Zea ma... 110 2e-22
ref|NP_197517.3| RNA polymerase II transcription mediator [Arabi... 108 7e-22
ref|XP_004141551.1| PREDICTED: mediator of RNA polymerase II tra... 108 9e-22
ref|XP_002873986.1| hypothetical protein ARALYDRAFT_351112 [Arab... 107 2e-21
gb|ACN26952.1| unknown [Zea mays] gi|413926580|gb|AFW66512.1| hy... 107 2e-21
gb|ESW26965.1| hypothetical protein PHAVU_003G161800g [Phaseolus... 106 3e-21
ref|XP_006400585.1| hypothetical protein EUTSA_v10012923mg [Eutr... 105 5e-21
gb|EXB54541.1| hypothetical protein L484_006289 [Morus notabilis] 105 6e-21
gb|EOY31009.1| RNA polymerase II transcription mediators isoform... 104 1e-20
ref|XP_006475818.1| PREDICTED: mediator of RNA polymerase II tra... 103 2e-20
ref|XP_003569428.1| PREDICTED: uncharacterized protein LOC100822... 103 2e-20
ref|XP_002457523.1| hypothetical protein SORBIDRAFT_03g008700 [S... 103 2e-20
ref|XP_006450970.1| hypothetical protein CICLE_v10007689mg [Citr... 103 3e-20
ref|XP_002285089.1| PREDICTED: uncharacterized protein LOC100266... 102 4e-20
ref|XP_003525658.1| PREDICTED: mediator of RNA polymerase II tra... 102 7e-20
ref|XP_004967947.1| PREDICTED: mediator of RNA polymerase II tra... 101 9e-20
ref|XP_002328671.1| predicted protein [Populus trichocarpa] gi|5... 100 3e-19
ref|XP_004251571.1| PREDICTED: mediator of RNA polymerase II tra... 99 4e-19
>ref|XP_006842865.1| hypothetical protein AMTR_s00081p00160620 [Amborella trichopoda]
gi|548845021|gb|ERN04540.1| hypothetical protein
AMTR_s00081p00160620 [Amborella trichopoda]
Length = 668
Score = 112 bits (281), Expect = 4e-23
Identities = 61/125 (48%), Positives = 86/125 (68%), Gaps = 8/125 (6%)
Frame = -1
Query: 359 MEENGIRIGVDRLPLKAVQAVEETGVEHFVP-EVSPEEKSLALLRRIDFG--IEEDVQKA 189
M+ I++ +D+LP++ V AV+E G EHF P +V+ +EK L+LLRRIDF +E+D +K
Sbjct: 1 MDGGNIKLSLDKLPIRRVDAVDENGTEHFPPSDVNQDEKYLSLLRRIDFTPVVEKDAKKQ 60
Query: 188 KASNEGVDSK-----STIEYIRMAQQELLYIVDCIDHVVANEAVTVAGMSKPKPQPNEVL 24
K S E S+ S +E +R A EL I+D + +V AN+AV VAGM++PKP PNEVL
Sbjct: 61 KVSRENQASQQWPWQSLVENLRQAHHELSVIIDLVHNVEANDAVAVAGMTRPKPLPNEVL 120
Query: 23 SDLAV 9
SDLA+
Sbjct: 121 SDLAI 125
>ref|XP_006286416.1| hypothetical protein CARUB_v10002972mg [Capsella rubella]
gi|482555122|gb|EOA19314.1| hypothetical protein
CARUB_v10002972mg [Capsella rubella]
Length = 651
Score = 111 bits (277), Expect = 1e-22
Identities = 57/125 (45%), Positives = 85/125 (68%), Gaps = 10/125 (8%)
Frame = -1
Query: 353 ENGIRIGVDRLPLKAVQAVEETGVEHFVPEVSPEEKSLALLRRIDFGI----EEDVQKAK 186
++ + I +DRLP+K ++++EE G EHF +V ++K ++L+RRIDF E++++K K
Sbjct: 2 DSDMEISLDRLPIKRLESIEENGAEHFPSDVDYDDKRVSLIRRIDFAWALEEEDELKKKK 61
Query: 185 ASNEGVDS------KSTIEYIRMAQQELLYIVDCIDHVVANEAVTVAGMSKPKPQPNEVL 24
DS K +E +++A QEL I+D ID V AN+AVTVAGM++PKP PNE+L
Sbjct: 62 QKKSSKDSTEQWKWKGMVENLQLAHQELSVIIDLIDTVQANDAVTVAGMTRPKPMPNEIL 121
Query: 23 SDLAV 9
SDLAV
Sbjct: 122 SDLAV 126
>ref|NP_001145828.1| uncharacterized protein LOC100279335 [Zea mays]
gi|194704804|gb|ACF86486.1| unknown [Zea mays]
gi|219884585|gb|ACL52667.1| unknown [Zea mays]
gi|413947117|gb|AFW79766.1| hypothetical protein
ZEAMMB73_523859 [Zea mays]
Length = 661
Score = 110 bits (275), Expect = 2e-22
Identities = 58/125 (46%), Positives = 84/125 (67%), Gaps = 8/125 (6%)
Frame = -1
Query: 359 MEENGIRIGVDRLPLKAVQAVEETGVEHFVPEVSPEEKSLALLRRIDFG--IEEDVQKAK 186
MEE +R+ +D+LP+K ++A+EETG EH+ P+ S EE+ LA +RRIDF IE+D +KAK
Sbjct: 1 MEEGNVRVDLDKLPIKRLEAIEETGNEHYPPDTSNEEQRLAAIRRIDFSWVIEKDAKKAK 60
Query: 185 ASNEGVDSKST------IEYIRMAQQELLYIVDCIDHVVANEAVTVAGMSKPKPQPNEVL 24
+ E ++ +E ++ A QEL ++D I V AN+AV VA +KPK QPNE+L
Sbjct: 61 KAAEADTAQQAWPWQGLMESLQQAHQELSVVIDLIGTVEANDAVAVASTTKPKSQPNEIL 120
Query: 23 SDLAV 9
D+AV
Sbjct: 121 VDMAV 125
>ref|NP_197517.3| RNA polymerase II transcription mediator [Arabidopsis thaliana]
gi|395406781|sp|F4K460.1|MED17_ARATH RecName:
Full=Mediator of RNA polymerase II transcription subunit
17 gi|332005425|gb|AED92808.1| RNA polymerase II
transcription mediator [Arabidopsis thaliana]
Length = 653
Score = 108 bits (270), Expect = 7e-22
Identities = 56/125 (44%), Positives = 84/125 (67%), Gaps = 10/125 (8%)
Frame = -1
Query: 353 ENGIRIGVDRLPLKAVQAVEETGVEHFVPEVSPEEKSLALLRRIDFGI----EEDVQKAK 186
++ + I +DRLP+K ++++EE G E F +V ++K ++L+RRIDF E++++K K
Sbjct: 2 DSDMEISLDRLPIKRLESIEENGAERFPSDVDYDDKRVSLIRRIDFAWALEEEDELKKKK 61
Query: 185 ASNEGVDS------KSTIEYIRMAQQELLYIVDCIDHVVANEAVTVAGMSKPKPQPNEVL 24
DS K +E +++A QEL I+D ID V AN+AVTVAGM++PKP PNE+L
Sbjct: 62 QKKSSKDSVEQWKWKGMVENLQLAHQELTVIIDLIDTVQANDAVTVAGMTRPKPMPNEIL 121
Query: 23 SDLAV 9
SDLAV
Sbjct: 122 SDLAV 126
>ref|XP_004141551.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Cucumis sativus]
gi|449481525|ref|XP_004156208.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 17-like [Cucumis
sativus]
Length = 662
Score = 108 bits (269), Expect = 9e-22
Identities = 58/123 (47%), Positives = 84/123 (68%), Gaps = 8/123 (6%)
Frame = -1
Query: 353 ENGIRIGVDRLPLKAVQAVEETGVEHFVPEVSPEEKSLALLRRIDFG--IEEDVQKAKAS 180
+ +++ +D+LP+K ++A+EE G+E F +V EEK L+L+RRIDF IE+D K K
Sbjct: 2 DEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQK 61
Query: 179 NEGVDS------KSTIEYIRMAQQELLYIVDCIDHVVANEAVTVAGMSKPKPQPNEVLSD 18
+S +S IE +++A QEL I+D I+ V AN+AVTVAGM++PKP PNEVL+D
Sbjct: 62 KSSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLAD 121
Query: 17 LAV 9
L V
Sbjct: 122 LGV 124
>ref|XP_002873986.1| hypothetical protein ARALYDRAFT_351112 [Arabidopsis lyrata subsp.
lyrata] gi|297319823|gb|EFH50245.1| hypothetical protein
ARALYDRAFT_351112 [Arabidopsis lyrata subsp. lyrata]
Length = 652
Score = 107 bits (267), Expect = 2e-21
Identities = 56/125 (44%), Positives = 84/125 (67%), Gaps = 10/125 (8%)
Frame = -1
Query: 353 ENGIRIGVDRLPLKAVQAVEETGVEHFVPEVSPEEKSLALLRRIDFGI----EEDVQKAK 186
++ + I +DRLP+K ++++EE G E F +V ++K ++L+RRIDF E++++K K
Sbjct: 2 DSDMEISLDRLPIKRLESIEENGAERFPSDVGYDDKRVSLIRRIDFAWALEEEDELKKKK 61
Query: 185 ASNEGVDS------KSTIEYIRMAQQELLYIVDCIDHVVANEAVTVAGMSKPKPQPNEVL 24
DS K +E +++A QEL I+D ID V AN+AVTVAGM++PKP PNE+L
Sbjct: 62 QKKSSKDSAEQWKWKGMVENLQLAHQELSVIIDLIDTVQANDAVTVAGMTRPKPLPNEIL 121
Query: 23 SDLAV 9
SDLAV
Sbjct: 122 SDLAV 126
>gb|ACN26952.1| unknown [Zea mays] gi|413926580|gb|AFW66512.1| hypothetical protein
ZEAMMB73_010825 [Zea mays] gi|413926581|gb|AFW66513.1|
hypothetical protein ZEAMMB73_010825 [Zea mays]
Length = 660
Score = 107 bits (266), Expect = 2e-21
Identities = 55/126 (43%), Positives = 84/126 (66%), Gaps = 8/126 (6%)
Frame = -1
Query: 359 MEENGIRIGVDRLPLKAVQAVEETGVEHFVPEVSPEEKSLALLRRIDFG--IEEDVQKAK 186
ME+ + + +D+LP+K ++A++ETG EH+ P+ S EE+ LA +RRIDF IE+D +KAK
Sbjct: 1 MEKGDVLVDLDKLPMKRLEAIDETGNEHYPPDTSNEEQRLAAIRRIDFSWVIEKDAKKAK 60
Query: 185 ASNEGVDSKST------IEYIRMAQQELLYIVDCIDHVVANEAVTVAGMSKPKPQPNEVL 24
+ E ++ +E ++ A QEL ++D I V AN+A+ VA +KPK QPNE+L
Sbjct: 61 KAAEADTTQQAWPWQGLMESLQQAHQELSVVIDLIGTVEANDAMAVASTTKPKSQPNEIL 120
Query: 23 SDLAVC 6
D+AVC
Sbjct: 121 VDMAVC 126
>gb|ESW26965.1| hypothetical protein PHAVU_003G161800g [Phaseolus vulgaris]
Length = 663
Score = 106 bits (265), Expect = 3e-21
Identities = 58/126 (46%), Positives = 87/126 (69%), Gaps = 9/126 (7%)
Frame = -1
Query: 359 MEEN-GIRIGVDRLPLKAVQAVEETGVEHFVPEVSPEEKSLALLRRIDFG--IEEDVQKA 189
M++N ++I +D+LP+K + ++EE G+E F P+V +EK L+L+RRIDF IE+D +K
Sbjct: 1 MDDNMDLQISLDKLPIKRLDSIEENGMERFPPDVDYDEKRLSLIRRIDFAWAIEKDEEKK 60
Query: 188 KASNEGVDS------KSTIEYIRMAQQELLYIVDCIDHVVANEAVTVAGMSKPKPQPNEV 27
K ++ +S +E +++A QEL I+D I+ V AN+AVTVA M++PK QPNE
Sbjct: 61 KQKKSSKETSTPWQWQSMVENLQLAHQELSVIIDLINTVEANDAVTVASMTRPKLQPNEA 120
Query: 26 LSDLAV 9
LSDLAV
Sbjct: 121 LSDLAV 126
>ref|XP_006400585.1| hypothetical protein EUTSA_v10012923mg [Eutrema salsugineum]
gi|557101675|gb|ESQ42038.1| hypothetical protein
EUTSA_v10012923mg [Eutrema salsugineum]
Length = 650
Score = 105 bits (263), Expect = 5e-21
Identities = 58/125 (46%), Positives = 85/125 (68%), Gaps = 10/125 (8%)
Frame = -1
Query: 353 ENGIRIGVDRLPLKAVQAVEETGVEHFVPEVSPEEKSLALLRRIDFGI---EEDVQK--- 192
++ + I +DRLP+K ++++EE G E F +V+ ++K ++L+RRIDF EED K
Sbjct: 2 DSDMEISLDRLPIKRLESIEENGAERFPSDVNYDDKRVSLIRRIDFAWALEEEDELKKKK 61
Query: 191 ----AKASNEGVDSKSTIEYIRMAQQELLYIVDCIDHVVANEAVTVAGMSKPKPQPNEVL 24
+K S+E K +E +++A QEL I+D I+ V AN+AVTVAGM+KPKP PNE+L
Sbjct: 62 QKKSSKESSEQWQWKGMVENLQLAHQELSVIIDLINTVEANDAVTVAGMTKPKPMPNELL 121
Query: 23 SDLAV 9
SDLAV
Sbjct: 122 SDLAV 126
>gb|EXB54541.1| hypothetical protein L484_006289 [Morus notabilis]
Length = 701
Score = 105 bits (262), Expect = 6e-21
Identities = 57/119 (47%), Positives = 85/119 (71%), Gaps = 7/119 (5%)
Frame = -1
Query: 344 IRIGVDRLPLKAVQAVEETGVEHFVPEVSPEEKSLALLRRIDFG--IEEDVQKA--KASN 177
+++ +D+LP+K + +EE G E F +V +EK L+L+RRIDF +E+D +K K++
Sbjct: 5 VQVSLDKLPVKRLDVIEENGAERFPSDVGYDEKRLSLIRRIDFAWAVEKDEKKKQKKSAK 64
Query: 176 EGVDS---KSTIEYIRMAQQELLYIVDCIDHVVANEAVTVAGMSKPKPQPNEVLSDLAV 9
E + ++ +E +++AQQEL IVD I+ V AN+AVTVAGM++PKP PNEVLSDLAV
Sbjct: 65 ESLTPWPWQTMVENLQLAQQELSVIVDLINTVEANDAVTVAGMTRPKPLPNEVLSDLAV 123
>gb|EOY31009.1| RNA polymerase II transcription mediators isoform 1 [Theobroma
cacao] gi|508783754|gb|EOY31010.1| RNA polymerase II
transcription mediators isoform 1 [Theobroma cacao]
Length = 663
Score = 104 bits (260), Expect = 1e-20
Identities = 56/123 (45%), Positives = 84/123 (68%), Gaps = 8/123 (6%)
Frame = -1
Query: 353 ENGIRIGVDRLPLKAVQAVEETGVEHFVPEVSPEEKSLALLRRIDFGI------EEDVQK 192
+ + I +D+LP++A+ A+EE GVE + E+S +EK ++L+RRIDF E + +K
Sbjct: 2 DGNLEISLDKLPVRALDAIEENGVERYPHELSYDEKRVSLIRRIDFAWALETDEERERKK 61
Query: 191 AKASNEGVDSKST--IEYIRMAQQELLYIVDCIDHVVANEAVTVAGMSKPKPQPNEVLSD 18
+ D+ +T +E +++A QEL I+D I+ V AN+AVTVAGM++PKP PNEVLSD
Sbjct: 62 KQKKKNSKDATATWLVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLSD 121
Query: 17 LAV 9
LAV
Sbjct: 122 LAV 124
>ref|XP_006475818.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Citrus sinensis]
Length = 657
Score = 103 bits (258), Expect = 2e-20
Identities = 60/124 (48%), Positives = 82/124 (66%), Gaps = 12/124 (9%)
Frame = -1
Query: 344 IRIGVDRLPLKAVQAVEETGVEHFVPEVSPEEKSLALLRRIDFG--IEEDVQKA--KASN 177
+ I VD+LP+K + A+EETG E F P+V +EK +L+RRIDF +E+D K K+S
Sbjct: 5 LEISVDKLPVKRLDAIEETGAERFPPDVGYDEKRESLIRRIDFAWAVEKDDNKRLKKSSK 64
Query: 176 EGVDSKST--------IEYIRMAQQELLYIVDCIDHVVANEAVTVAGMSKPKPQPNEVLS 21
E S +T +E ++ A QEL I+D I+ V AN+AVTVAGM++PK PNEVLS
Sbjct: 65 ESSSSATTTPWQWQNMVENLQFAHQELSVIIDLINTVEANDAVTVAGMTRPKALPNEVLS 124
Query: 20 DLAV 9
DL+V
Sbjct: 125 DLSV 128
>ref|XP_003569428.1| PREDICTED: uncharacterized protein LOC100822959 [Brachypodium
distachyon]
Length = 656
Score = 103 bits (258), Expect = 2e-20
Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 7/122 (5%)
Frame = -1
Query: 353 ENGIRIGVDRLPLKAVQAVEETGVEHFVPEVSPEEKSLALLRRIDFG--IEEDVQKAKAS 180
+ G+R+ +D+LP+K + A++E G EH+ P+ S EE+ LA +RR+DF IE D +KAK +
Sbjct: 2 DEGVRLDLDKLPIKRLDAIDEAGNEHYPPDTSSEEQRLAAIRRVDFSWVIERDAKKAKKA 61
Query: 179 NEGVDSKS-----TIEYIRMAQQELLYIVDCIDHVVANEAVTVAGMSKPKPQPNEVLSDL 15
E +S +E ++ AQQEL ++D I V AN+AV V SKPK PNEVL D+
Sbjct: 62 AEDTAQQSWQWQGLMESLQQAQQELTVVLDLISTVEANDAVAVTTTSKPKSLPNEVLDDM 121
Query: 14 AV 9
AV
Sbjct: 122 AV 123
>ref|XP_002457523.1| hypothetical protein SORBIDRAFT_03g008700 [Sorghum bicolor]
gi|241929498|gb|EES02643.1| hypothetical protein
SORBIDRAFT_03g008700 [Sorghum bicolor]
Length = 659
Score = 103 bits (257), Expect = 2e-20
Identities = 54/125 (43%), Positives = 83/125 (66%), Gaps = 8/125 (6%)
Frame = -1
Query: 359 MEENGIRIGVDRLPLKAVQAVEETGVEHFVPEVSPEEKSLALLRRIDFG--IEEDVQKAK 186
ME++ +R+ +D+LP+K ++A++E G EH+ P+ S EE+ LA +RRIDF IE+D +KAK
Sbjct: 1 MEKDDVRVDLDKLPIKRLEAIDEIGNEHYPPDTSNEEQRLAAIRRIDFSWVIEKDAKKAK 60
Query: 185 ASNEGVDSKST------IEYIRMAQQELLYIVDCIDHVVANEAVTVAGMSKPKPQPNEVL 24
+ E ++ +E ++ A EL ++D I V AN+AV VA +KPK QPNE+L
Sbjct: 61 KAAEADTTQQVWPWQGLMESLQQAHHELSVVIDLIGTVEANDAVAVASTTKPKSQPNEIL 120
Query: 23 SDLAV 9
D+AV
Sbjct: 121 VDMAV 125
>ref|XP_006450970.1| hypothetical protein CICLE_v10007689mg [Citrus clementina]
gi|557554196|gb|ESR64210.1| hypothetical protein
CICLE_v10007689mg [Citrus clementina]
Length = 657
Score = 103 bits (256), Expect = 3e-20
Identities = 60/124 (48%), Positives = 81/124 (65%), Gaps = 12/124 (9%)
Frame = -1
Query: 344 IRIGVDRLPLKAVQAVEETGVEHFVPEVSPEEKSLALLRRIDFG--IEEDVQKA--KASN 177
+ I VD+LP+K + A+EETG E F P+V +EK +L+RRIDF +E+D K K S
Sbjct: 5 LEISVDKLPVKRLDAIEETGAERFPPDVGYDEKRESLIRRIDFAWAVEKDDNKRLKKRSK 64
Query: 176 EGVDSKST--------IEYIRMAQQELLYIVDCIDHVVANEAVTVAGMSKPKPQPNEVLS 21
E S +T +E ++ A QEL I+D I+ V AN+AVTVAGM++PK PNEVLS
Sbjct: 65 ESSSSATTTPWQWQNMVENLQFAHQELSVIIDLINTVEANDAVTVAGMTRPKALPNEVLS 124
Query: 20 DLAV 9
DL+V
Sbjct: 125 DLSV 128
>ref|XP_002285089.1| PREDICTED: uncharacterized protein LOC100266409 [Vitis vinifera]
gi|147821405|emb|CAN63500.1| hypothetical protein
VITISV_011675 [Vitis vinifera]
gi|297738929|emb|CBI28174.3| unnamed protein product
[Vitis vinifera]
Length = 660
Score = 102 bits (255), Expect = 4e-20
Identities = 57/118 (48%), Positives = 80/118 (67%), Gaps = 6/118 (5%)
Frame = -1
Query: 344 IRIGVDRLPLKAVQAVEETGVEHFVPEVSPEEKSLALLRRIDFG--IEEDVQKAK-ASNE 174
+ I +D+LP+K + A+EE G E F +V ++K ++L+RRIDF +E+D +K K AS E
Sbjct: 5 MEISLDKLPIKRLDAIEENGAERFPTDVGYDDKRVSLIRRIDFAWAVEKDTKKQKKASKE 64
Query: 173 GVDS---KSTIEYIRMAQQELLYIVDCIDHVVANEAVTVAGMSKPKPQPNEVLSDLAV 9
+S +E +R+A QEL I+D I V AN+AVTVA M++PKP PNEVLSDL V
Sbjct: 65 EATPWPWQSLVENLRLAHQELSVIIDLISTVEANDAVTVASMTRPKPLPNEVLSDLGV 122
>ref|XP_003525658.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like isoform X1 [Glycine max]
gi|571454302|ref|XP_006579749.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 17-like isoform
X2 [Glycine max]
Length = 659
Score = 102 bits (253), Expect = 7e-20
Identities = 53/120 (44%), Positives = 81/120 (67%), Gaps = 8/120 (6%)
Frame = -1
Query: 344 IRIGVDRLPLKAVQAVEETGVEHFVPEVSPEEKSLALLRRIDFG--IEEDVQKAKASNEG 171
++I +D+LP+K + ++EE G+E F P+V +EK L+L+RRIDF +E+D +K K
Sbjct: 7 LQISLDKLPIKRLDSIEENGIERFPPDVDYDEKRLSLIRRIDFAWAVEKDEEKKKKQKSS 66
Query: 170 VDSKST------IEYIRMAQQELLYIVDCIDHVVANEAVTVAGMSKPKPQPNEVLSDLAV 9
++ + +E +++A QEL I+D I+ V AN+AVTVA M++PK PNE LSDLAV
Sbjct: 67 KETSTPWQWQGMVENLQLAHQELSVIIDLINTVEANDAVTVASMTRPKLLPNEALSDLAV 126
>ref|XP_004967947.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Setaria italica]
Length = 661
Score = 101 bits (252), Expect = 9e-20
Identities = 54/125 (43%), Positives = 82/125 (65%), Gaps = 8/125 (6%)
Frame = -1
Query: 359 MEENGIRIGVDRLPLKAVQAVEETGVEHFVPEVSPEEKSLALLRRIDFG--IEEDVQKAK 186
M E + + +D+LP+K ++A++E G EH+ P+ S +E+ LA +RRIDF IE+D +KAK
Sbjct: 1 MVEGDVLLDLDKLPIKRLEAIDEAGNEHYPPDTSNKEQHLAAIRRIDFSWVIEKDAKKAK 60
Query: 185 ASNEGVDSKST------IEYIRMAQQELLYIVDCIDHVVANEAVTVAGMSKPKPQPNEVL 24
+ E ++ +E ++ AQQEL ++D I V AN+AV VA +KPK QPNE+L
Sbjct: 61 KAAEADTAQQAWPWQGLMESLQQAQQELSVVIDLIGTVEANDAVAVASTTKPKSQPNEIL 120
Query: 23 SDLAV 9
D+AV
Sbjct: 121 VDMAV 125
>ref|XP_002328671.1| predicted protein [Populus trichocarpa]
gi|566206273|ref|XP_006374395.1| hypothetical protein
POPTR_0015s06780g [Populus trichocarpa]
gi|550322157|gb|ERP52192.1| hypothetical protein
POPTR_0015s06780g [Populus trichocarpa]
Length = 667
Score = 99.8 bits (247), Expect = 3e-19
Identities = 54/127 (42%), Positives = 80/127 (62%), Gaps = 15/127 (11%)
Frame = -1
Query: 344 IRIGVDRLPLKAVQAVEETGVEHFVPEVSPEEKSLALLRRIDFGI------EEDVQKAKA 183
+ + +D+LP+K ++++EE G E F ++ +EK +AL+RRIDF +E QK K
Sbjct: 5 LEMSLDKLPVKRLESIEENGFERFPTDIGYDEKQVALIRRIDFAWAVEKEDKEKKQKKKQ 64
Query: 182 SNEGVDSKST---------IEYIRMAQQELLYIVDCIDHVVANEAVTVAGMSKPKPQPNE 30
+S ST +E + +A QEL I+D I+ V AN+AVTVAGM++PKP PNE
Sbjct: 65 KKSSRESSSTTTPWPWQNMVENLHLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNE 124
Query: 29 VLSDLAV 9
+L+DLAV
Sbjct: 125 ILADLAV 131
>ref|XP_004251571.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Solanum lycopersicum]
Length = 663
Score = 99.4 bits (246), Expect = 4e-19
Identities = 57/129 (44%), Positives = 79/129 (61%), Gaps = 15/129 (11%)
Frame = -1
Query: 344 IRIGVDRLPLKAVQAVEETGVEHFVPEVSPEEKSLALLRRIDFGI----EEDVQKAKASN 177
+ I VD+LP+K ++ +EE G E F ++ +EK++ L+RRIDF EE +K K S+
Sbjct: 5 LEISVDKLPIKRLEYIEEQGAERFPSDIGYDEKTVNLIRRIDFAWAVEREEPSKKQKKSS 64
Query: 176 EGVDSKST-----------IEYIRMAQQELLYIVDCIDHVVANEAVTVAGMSKPKPQPNE 30
SK T +E +R+A QEL I+D I V AN+AVTVAGM++PK PNE
Sbjct: 65 SATSSKETSSSQPWQWQSLVENLRLAHQELQVIIDLIHTVEANDAVTVAGMTRPKQLPNE 124
Query: 29 VLSDLAVCL 3
LSDLAV +
Sbjct: 125 HLSDLAVSM 133