BLASTX nr result
ID: Ephedra28_contig00024820
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00024820
(2033 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF71990.1|AC013453_15 Hypothetical protein [Arabidopsis thal... 89 9e-15
dbj|BAD42454.1| centromere protein C homolog [Arabidopsis thaliana] 89 9e-15
ref|NP_173018.2| centromere protein C [Arabidopsis thaliana] gi|... 89 9e-15
ref|XP_002280442.2| PREDICTED: uncharacterized protein LOC100244... 88 2e-14
emb|CBI36186.3| unnamed protein product [Vitis vinifera] 88 2e-14
gb|EOY26669.1| Centromere protein C, putative isoform 3 [Theobro... 87 3e-14
gb|EOY26668.1| Centromere protein C, putative isoform 2 [Theobro... 87 3e-14
gb|EOY26667.1| Centromere protein C, putative isoform 1 [Theobro... 87 3e-14
ref|XP_006306866.1| hypothetical protein CARUB_v10008413mg, part... 87 3e-14
ref|XP_006306865.1| hypothetical protein CARUB_v10008413mg, part... 87 3e-14
ref|XP_002890116.1| CENP-C [Arabidopsis lyrata subsp. lyrata] gi... 86 5e-14
gb|AAU04611.1| CENP-C [Arabidopsis arenosa] 86 5e-14
ref|XP_002298134.2| hypothetical protein POPTR_0001s17850g [Popu... 86 6e-14
gb|AAU04614.1| CENP-C [Beta vulgaris subsp. vulgaris] 85 1e-13
ref|XP_006465449.1| PREDICTED: uncharacterized protein LOC102609... 84 2e-13
ref|XP_006465448.1| PREDICTED: uncharacterized protein LOC102609... 84 2e-13
ref|XP_006465447.1| PREDICTED: uncharacterized protein LOC102609... 84 2e-13
ref|XP_006427091.1| hypothetical protein CICLE_v10024870mg [Citr... 84 2e-13
ref|XP_006385477.1| hypothetical protein POPTR_0003s05530g [Popu... 84 2e-13
ref|XP_006844397.1| hypothetical protein AMTR_s00142p00096890 [A... 84 2e-13
>gb|AAF71990.1|AC013453_15 Hypothetical protein [Arabidopsis thaliana]
Length = 710
Score = 88.6 bits (218), Expect = 9e-15
Identities = 48/79 (60%), Positives = 59/79 (74%)
Frame = -2
Query: 508 GTAISGAAACRRSTRIRSRPLEYWKGERFLQGRIYDSLPTVIGIKYAAPELPKKRNHSGN 329
GT I G RRSTRI+SRPLEYW+GERFL GRI++SL TVIGIKYA+P K+ + +
Sbjct: 634 GTKIEGGV--RRSTRIKSRPLEYWRGERFLYGRIHESLTTVIGIKYASPGEGKRDSRAS- 690
Query: 328 MKVESFVSTKYSALLRFAA 272
KV+SFVS +Y L+ FAA
Sbjct: 691 -KVKSFVSDEYKKLVDFAA 708
>dbj|BAD42454.1| centromere protein C homolog [Arabidopsis thaliana]
Length = 318
Score = 88.6 bits (218), Expect = 9e-15
Identities = 48/79 (60%), Positives = 59/79 (74%)
Frame = -2
Query: 508 GTAISGAAACRRSTRIRSRPLEYWKGERFLQGRIYDSLPTVIGIKYAAPELPKKRNHSGN 329
GT I G RRSTRI+SRPLEYW+GERFL GRI++SL TVIGIKYA+P K+ + +
Sbjct: 242 GTKIEGGV--RRSTRIKSRPLEYWRGERFLYGRIHESLTTVIGIKYASPGEGKRDSRAS- 298
Query: 328 MKVESFVSTKYSALLRFAA 272
KV+SFVS +Y L+ FAA
Sbjct: 299 -KVKSFVSDEYKKLVDFAA 316
>ref|NP_173018.2| centromere protein C [Arabidopsis thaliana]
gi|51477443|gb|AAU04629.1| CENP-C [Arabidopsis thaliana]
gi|332191225|gb|AEE29346.1| centromere protein C
[Arabidopsis thaliana]
Length = 705
Score = 88.6 bits (218), Expect = 9e-15
Identities = 48/79 (60%), Positives = 59/79 (74%)
Frame = -2
Query: 508 GTAISGAAACRRSTRIRSRPLEYWKGERFLQGRIYDSLPTVIGIKYAAPELPKKRNHSGN 329
GT I G RRSTRI+SRPLEYW+GERFL GRI++SL TVIGIKYA+P K+ + +
Sbjct: 629 GTKIEGGV--RRSTRIKSRPLEYWRGERFLYGRIHESLTTVIGIKYASPGEGKRDSRAS- 685
Query: 328 MKVESFVSTKYSALLRFAA 272
KV+SFVS +Y L+ FAA
Sbjct: 686 -KVKSFVSDEYKKLVDFAA 703
>ref|XP_002280442.2| PREDICTED: uncharacterized protein LOC100244530 [Vitis vinifera]
Length = 949
Score = 87.8 bits (216), Expect = 2e-14
Identities = 56/130 (43%), Positives = 74/130 (56%), Gaps = 4/130 (3%)
Frame = -2
Query: 649 PSKA--DKLRICTS--LKPSKSRTSTKRNAMSLDIDRECNLKQNMGLQDNQGTAISGAAA 482
PSK D L CT L+PS + KR+ RE K+ G Q G ++
Sbjct: 822 PSKTGDDDLEQCTEKILEPS-GESLNKRSKAKTPPRRERKRKEISGRQSLAGAGTLWSSG 880
Query: 481 CRRSTRIRSRPLEYWKGERFLQGRIYDSLPTVIGIKYAAPELPKKRNHSGNMKVESFVST 302
RRSTRI+ RPLEYWKGERFL GR++ SL +VIG+KY + P K + +KV+S+VS
Sbjct: 881 VRRSTRIKMRPLEYWKGERFLYGRVHKSLTSVIGVKYVS---PAKGDGKPTIKVKSYVSD 937
Query: 301 KYSALLRFAA 272
+Y L+ AA
Sbjct: 938 EYKELVDLAA 947
>emb|CBI36186.3| unnamed protein product [Vitis vinifera]
Length = 899
Score = 87.8 bits (216), Expect = 2e-14
Identities = 56/130 (43%), Positives = 74/130 (56%), Gaps = 4/130 (3%)
Frame = -2
Query: 649 PSKA--DKLRICTS--LKPSKSRTSTKRNAMSLDIDRECNLKQNMGLQDNQGTAISGAAA 482
PSK D L CT L+PS + KR+ RE K+ G Q G ++
Sbjct: 772 PSKTGDDDLEQCTEKILEPS-GESLNKRSKAKTPPRRERKRKEISGRQSLAGAGTLWSSG 830
Query: 481 CRRSTRIRSRPLEYWKGERFLQGRIYDSLPTVIGIKYAAPELPKKRNHSGNMKVESFVST 302
RRSTRI+ RPLEYWKGERFL GR++ SL +VIG+KY + P K + +KV+S+VS
Sbjct: 831 VRRSTRIKMRPLEYWKGERFLYGRVHKSLTSVIGVKYVS---PAKGDGKPTIKVKSYVSD 887
Query: 301 KYSALLRFAA 272
+Y L+ AA
Sbjct: 888 EYKELVDLAA 897
>gb|EOY26669.1| Centromere protein C, putative isoform 3 [Theobroma cacao]
Length = 547
Score = 87.0 bits (214), Expect = 3e-14
Identities = 51/96 (53%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Frame = -2
Query: 544 NLKQNMGLQDNQGTAISG----AAACRRSTRIRSRPLEYWKGERFLQGRIYDSLPTVIGI 377
N + L Q A SG A RRSTRIRSRPLE+WKGERFL GRI+ SL TVIGI
Sbjct: 453 NERMRKALSRRQSLAGSGTTYNAEGRRRSTRIRSRPLEFWKGERFLYGRIHSSLATVIGI 512
Query: 376 KYAAPELPKKRNHSGNMKVESFVSTKYSALLRFAAQ 269
KY +P P +N +KV+SFVS +Y L+ AA+
Sbjct: 513 KYESPVRPDGKN--ATLKVKSFVSDEYKDLVERAAR 546
>gb|EOY26668.1| Centromere protein C, putative isoform 2 [Theobroma cacao]
Length = 727
Score = 87.0 bits (214), Expect = 3e-14
Identities = 51/96 (53%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Frame = -2
Query: 544 NLKQNMGLQDNQGTAISG----AAACRRSTRIRSRPLEYWKGERFLQGRIYDSLPTVIGI 377
N + L Q A SG A RRSTRIRSRPLE+WKGERFL GRI+ SL TVIGI
Sbjct: 633 NERMRKALSRRQSLAGSGTTYNAEGRRRSTRIRSRPLEFWKGERFLYGRIHSSLATVIGI 692
Query: 376 KYAAPELPKKRNHSGNMKVESFVSTKYSALLRFAAQ 269
KY +P P +N +KV+SFVS +Y L+ AA+
Sbjct: 693 KYESPVRPDGKN--ATLKVKSFVSDEYKDLVERAAR 726
>gb|EOY26667.1| Centromere protein C, putative isoform 1 [Theobroma cacao]
Length = 729
Score = 87.0 bits (214), Expect = 3e-14
Identities = 51/96 (53%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Frame = -2
Query: 544 NLKQNMGLQDNQGTAISG----AAACRRSTRIRSRPLEYWKGERFLQGRIYDSLPTVIGI 377
N + L Q A SG A RRSTRIRSRPLE+WKGERFL GRI+ SL TVIGI
Sbjct: 635 NERMRKALSRRQSLAGSGTTYNAEGRRRSTRIRSRPLEFWKGERFLYGRIHSSLATVIGI 694
Query: 376 KYAAPELPKKRNHSGNMKVESFVSTKYSALLRFAAQ 269
KY +P P +N +KV+SFVS +Y L+ AA+
Sbjct: 695 KYESPVRPDGKN--ATLKVKSFVSDEYKDLVERAAR 728
>ref|XP_006306866.1| hypothetical protein CARUB_v10008413mg, partial [Capsella rubella]
gi|482575577|gb|EOA39764.1| hypothetical protein
CARUB_v10008413mg, partial [Capsella rubella]
Length = 737
Score = 87.0 bits (214), Expect = 3e-14
Identities = 53/117 (45%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Frame = -2
Query: 604 SKSRTSTKRNA-----MSLDIDRECNLKQNMGLQDNQGTAISGAAACRRSTRIRSRPLEY 440
+K +T K N + RE + GT + G RRSTRI+SRPLEY
Sbjct: 624 AKKQTKRKSNEREEKKQKQTVTREAKIFSRRKSLAGAGTKMEGGI--RRSTRIKSRPLEY 681
Query: 439 WKGERFLQGRIYDSLPTVIGIKYAAPELPKKRNHSGNMKVESFVSTKYSALLRFAAQ 269
W+GERFL GRI++SL TVIGIKY +PE +N KV+SFVS Y L+ FAA+
Sbjct: 682 WRGERFLYGRIHESLTTVIGIKYGSPE--DGKNDKRASKVKSFVSDDYKDLVDFAAR 736
>ref|XP_006306865.1| hypothetical protein CARUB_v10008413mg, partial [Capsella rubella]
gi|482575576|gb|EOA39763.1| hypothetical protein
CARUB_v10008413mg, partial [Capsella rubella]
Length = 736
Score = 87.0 bits (214), Expect = 3e-14
Identities = 53/117 (45%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Frame = -2
Query: 604 SKSRTSTKRNA-----MSLDIDRECNLKQNMGLQDNQGTAISGAAACRRSTRIRSRPLEY 440
+K +T K N + RE + GT + G RRSTRI+SRPLEY
Sbjct: 623 AKKQTKRKSNEREEKKQKQTVTREAKIFSRRKSLAGAGTKMEGGI--RRSTRIKSRPLEY 680
Query: 439 WKGERFLQGRIYDSLPTVIGIKYAAPELPKKRNHSGNMKVESFVSTKYSALLRFAAQ 269
W+GERFL GRI++SL TVIGIKY +PE +N KV+SFVS Y L+ FAA+
Sbjct: 681 WRGERFLYGRIHESLTTVIGIKYGSPE--DGKNDKRASKVKSFVSDDYKDLVDFAAR 735
>ref|XP_002890116.1| CENP-C [Arabidopsis lyrata subsp. lyrata]
gi|297335958|gb|EFH66375.1| CENP-C [Arabidopsis lyrata
subsp. lyrata]
Length = 708
Score = 86.3 bits (212), Expect = 5e-14
Identities = 54/113 (47%), Positives = 65/113 (57%)
Frame = -2
Query: 610 KPSKSRTSTKRNAMSLDIDRECNLKQNMGLQDNQGTAISGAAACRRSTRIRSRPLEYWKG 431
+ S R K + RE L GT + G RRSTRI+SRPLEYWKG
Sbjct: 598 RKSNEREEKKPKNTRKTLTREGKLFSRRKSLAAAGTKMEGGV--RRSTRIKSRPLEYWKG 655
Query: 430 ERFLQGRIYDSLPTVIGIKYAAPELPKKRNHSGNMKVESFVSTKYSALLRFAA 272
ERFL GRI++SL TVIGIKYA+P K + KV+SFVS +Y L+ FAA
Sbjct: 656 ERFLYGRIHESLTTVIGIKYASPGEGKSDLRA--CKVKSFVSDEYKELVDFAA 706
>gb|AAU04611.1| CENP-C [Arabidopsis arenosa]
Length = 710
Score = 86.3 bits (212), Expect = 5e-14
Identities = 54/113 (47%), Positives = 65/113 (57%)
Frame = -2
Query: 610 KPSKSRTSTKRNAMSLDIDRECNLKQNMGLQDNQGTAISGAAACRRSTRIRSRPLEYWKG 431
+ S R K + RE L GT + G RRSTRI+SRPLEYWKG
Sbjct: 600 RKSNEREEKKPKNTRKTLTREGKLFSRRKSLAAAGTKMEGGV--RRSTRIKSRPLEYWKG 657
Query: 430 ERFLQGRIYDSLPTVIGIKYAAPELPKKRNHSGNMKVESFVSTKYSALLRFAA 272
ERFL GRI++SL TVIGIKYA+P K + KV+SFVS +Y L+ FAA
Sbjct: 658 ERFLYGRIHESLTTVIGIKYASPGEGKSDVRA--CKVKSFVSDEYKELVDFAA 708
>ref|XP_002298134.2| hypothetical protein POPTR_0001s17850g [Populus trichocarpa]
gi|550347566|gb|EEE82939.2| hypothetical protein
POPTR_0001s17850g [Populus trichocarpa]
Length = 561
Score = 85.9 bits (211), Expect = 6e-14
Identities = 51/100 (51%), Positives = 63/100 (63%), Gaps = 5/100 (5%)
Frame = -2
Query: 556 DRECNLK--QNMGLQDNQGTAISGAA---ACRRSTRIRSRPLEYWKGERFLQGRIYDSLP 392
++ C K + L Q A SG + RRSTRIRSRPLEYWKGERFL GRI+ SL
Sbjct: 463 EKSCTAKGRKYRSLSRRQSLAASGTSWETGVRRSTRIRSRPLEYWKGERFLYGRIHGSLA 522
Query: 391 TVIGIKYAAPELPKKRNHSGNMKVESFVSTKYSALLRFAA 272
TVIGIKY +P+ K + +KV+SFVS +Y L+ AA
Sbjct: 523 TVIGIKYESPQNDKGK---PALKVKSFVSDEYKNLVELAA 559
>gb|AAU04614.1| CENP-C [Beta vulgaris subsp. vulgaris]
Length = 710
Score = 85.1 bits (209), Expect = 1e-13
Identities = 41/72 (56%), Positives = 53/72 (73%)
Frame = -2
Query: 487 AACRRSTRIRSRPLEYWKGERFLQGRIYDSLPTVIGIKYAAPELPKKRNHSGNMKVESFV 308
A RRSTRI+ RPL+YWKGERFL GR+++SL TVIG+KYA+ P K +KV+SFV
Sbjct: 640 AGVRRSTRIKMRPLQYWKGERFLYGRVHESLVTVIGVKYAS---PSKDTEEAGVKVKSFV 696
Query: 307 STKYSALLRFAA 272
S KY ++ FA+
Sbjct: 697 SDKYKDMVEFAS 708
>ref|XP_006465449.1| PREDICTED: uncharacterized protein LOC102609595 isoform X3 [Citrus
sinensis]
Length = 868
Score = 84.3 bits (207), Expect = 2e-13
Identities = 47/84 (55%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Frame = -2
Query: 511 QGTAISGAA---ACRRSTRIRSRPLEYWKGERFLQGRIYDSLPTVIGIKYAAPELPKKRN 341
Q A SG + RRSTRIRSRPLEYWKGERFL GR+++SL TVIGIKY E P +
Sbjct: 787 QSLAASGTSWESGVRRSTRIRSRPLEYWKGERFLYGRVHESLTTVIGIKY---ESPGNAD 843
Query: 340 HSGNMKVESFVSTKYSALLRFAAQ 269
+KV+SFVS +Y L+ AA+
Sbjct: 844 GKPGIKVKSFVSDEYKDLVELAAR 867
>ref|XP_006465448.1| PREDICTED: uncharacterized protein LOC102609595 isoform X2 [Citrus
sinensis]
Length = 868
Score = 84.3 bits (207), Expect = 2e-13
Identities = 47/84 (55%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Frame = -2
Query: 511 QGTAISGAA---ACRRSTRIRSRPLEYWKGERFLQGRIYDSLPTVIGIKYAAPELPKKRN 341
Q A SG + RRSTRIRSRPLEYWKGERFL GR+++SL TVIGIKY E P +
Sbjct: 787 QSLAASGTSWESGVRRSTRIRSRPLEYWKGERFLYGRVHESLTTVIGIKY---ESPGNAD 843
Query: 340 HSGNMKVESFVSTKYSALLRFAAQ 269
+KV+SFVS +Y L+ AA+
Sbjct: 844 GKPGIKVKSFVSDEYKDLVELAAR 867
>ref|XP_006465447.1| PREDICTED: uncharacterized protein LOC102609595 isoform X1 [Citrus
sinensis]
Length = 870
Score = 84.3 bits (207), Expect = 2e-13
Identities = 47/84 (55%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Frame = -2
Query: 511 QGTAISGAA---ACRRSTRIRSRPLEYWKGERFLQGRIYDSLPTVIGIKYAAPELPKKRN 341
Q A SG + RRSTRIRSRPLEYWKGERFL GR+++SL TVIGIKY E P +
Sbjct: 789 QSLAASGTSWESGVRRSTRIRSRPLEYWKGERFLYGRVHESLTTVIGIKY---ESPGNAD 845
Query: 340 HSGNMKVESFVSTKYSALLRFAAQ 269
+KV+SFVS +Y L+ AA+
Sbjct: 846 GKPGIKVKSFVSDEYKDLVELAAR 869
>ref|XP_006427091.1| hypothetical protein CICLE_v10024870mg [Citrus clementina]
gi|557529081|gb|ESR40331.1| hypothetical protein
CICLE_v10024870mg [Citrus clementina]
Length = 868
Score = 84.3 bits (207), Expect = 2e-13
Identities = 47/84 (55%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Frame = -2
Query: 511 QGTAISGAA---ACRRSTRIRSRPLEYWKGERFLQGRIYDSLPTVIGIKYAAPELPKKRN 341
Q A SG + RRSTRIRSRPLEYWKGERFL GR+++SL TVIGIKY E P +
Sbjct: 787 QSLAASGTSWESGVRRSTRIRSRPLEYWKGERFLYGRVHESLTTVIGIKY---ESPGNAD 843
Query: 340 HSGNMKVESFVSTKYSALLRFAAQ 269
+KV+SFVS +Y L+ AA+
Sbjct: 844 GKPGIKVKSFVSDEYKDLVELAAR 867
>ref|XP_006385477.1| hypothetical protein POPTR_0003s05530g [Populus trichocarpa]
gi|550342471|gb|ERP63274.1| hypothetical protein
POPTR_0003s05530g [Populus trichocarpa]
Length = 744
Score = 84.0 bits (206), Expect = 2e-13
Identities = 48/92 (52%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Frame = -2
Query: 538 KQNMGLQDNQGTAISGAA---ACRRSTRIRSRPLEYWKGERFLQGRIYDSLPTVIGIKYA 368
++N L A SG + RRSTRIRSRPLEYWKGERFL GRI+ SL TVIGIKY
Sbjct: 654 RKNGSLSKRHSLAASGTSWETGLRRSTRIRSRPLEYWKGERFLYGRIHGSLATVIGIKYE 713
Query: 367 APELPKKRNHSGNMKVESFVSTKYSALLRFAA 272
+P K + +KV+S+VS +Y L+ AA
Sbjct: 714 SPGNDKGKR---ALKVKSYVSDEYKDLVELAA 742
>ref|XP_006844397.1| hypothetical protein AMTR_s00142p00096890 [Amborella trichopoda]
gi|548846843|gb|ERN06072.1| hypothetical protein
AMTR_s00142p00096890 [Amborella trichopoda]
Length = 647
Score = 84.0 bits (206), Expect = 2e-13
Identities = 52/125 (41%), Positives = 71/125 (56%), Gaps = 5/125 (4%)
Frame = -2
Query: 628 RICTSLKPSKSRTSTKRNAMSLDIDRECNLKQNMGLQDNQGTAISGAAACRRSTRIRSRP 449
RI T K + +TKR+ ++ +L GT G RRSTRI+SRP
Sbjct: 522 RISTKQKNKEGEHATKRHGKRKELTHRKSLA-------GAGTKFEGGV--RRSTRIKSRP 572
Query: 448 LEYWKGERFLQGRIYDSLPTVIGIKYAAPELPKKRNHSGN-----MKVESFVSTKYSALL 284
LEYW+GER + GRI+DSL TVIG KYA+P LP R+ +K+ESFV +++ L+
Sbjct: 573 LEYWRGERLIYGRIHDSLATVIGRKYASP-LPMGRSKGRKDIEPALKIESFVPEEFTRLV 631
Query: 283 RFAAQ 269
FA +
Sbjct: 632 EFAGR 636