BLASTX nr result
ID: Ephedra28_contig00024777
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00024777
(1020 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFB73911.1| polyprotein [Citrus sinensis] 80 1e-12
gb|AFB73912.1| polyprotein [Citrus sinensis] 80 2e-12
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] 75 5e-11
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 70 2e-09
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 69 2e-09
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 68 5e-09
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 68 5e-09
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 68 5e-09
ref|XP_006484589.1| PREDICTED: uncharacterized protein LOC102625... 67 9e-09
ref|XP_006603521.1| PREDICTED: uncharacterized protein LOC102659... 66 2e-08
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 64 9e-08
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 63 2e-07
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 63 2e-07
ref|XP_006599785.1| PREDICTED: uncharacterized protein LOC102662... 62 4e-07
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 62 4e-07
emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana] 62 5e-07
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A... 62 5e-07
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 61 6e-07
ref|XP_006605109.1| PREDICTED: uncharacterized protein LOC102665... 61 8e-07
gb|AAD23679.1| putative retroelement pol polyprotein [Arabidopsi... 59 4e-06
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 80.5 bits (197), Expect = 1e-12
Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 2/196 (1%)
Frame = -3
Query: 583 EKLIFEKVVNLLLQHETTISQEHDRDHVLASSSKFKQARGLP**RQRRTSQAV*QA*CQE 404
E L+F+ V +L E S+ ++++ ASS +QA L R R T + + Q
Sbjct: 165 ESLVFDDVAASVLNEE---SRRKNKENRQASS---QQAEALSVTRGRSTERGPSGSQNQG 218
Query: 403 R*RV*SIKDFFYYN--KVGHVKSECWHNPENKGDYNRRGSWRGRKSNNQRQHGNMAIEEG 230
R + K+ YN K GHVK ECW N + + G++ G +A
Sbjct: 219 RSKFRGKKNVKCYNCGKKGHVKKECWSNQKRR---------EGKEPETSNAQGCVA---- 265
Query: 229 SSSQQDEVKKEPICMVQANRREETSTWYIDSGATKHMTERRNWFDSVDPEAYTGNVSLGD 50
S+S E+ V R+ + W IDSGAT HMT RR WF + +P + G+V +G+
Sbjct: 266 STSDDGEILYSEATTVSEGRKRLSDVWLIDSGATWHMTSRREWFHTYEPIS-GGSVYMGN 324
Query: 49 DSTYEIQGMGDVSLQL 2
D EI G+G + +++
Sbjct: 325 DHALEIAGIGTIKIKM 340
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 79.7 bits (195), Expect = 2e-12
Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 2/196 (1%)
Frame = -3
Query: 583 EKLIFEKVVNLLLQHETTISQEHDRDHVLASSSKFKQARGLP**RQRRTSQAV*QA*CQE 404
+ L+F+ V +L E S+ ++++ ASS +QA L R R T + +
Sbjct: 165 DSLVFDDVAASVLNEE---SRRKNKENRQASS---QQAEALSVTRGRSTERGPSGSQNHG 218
Query: 403 R*RV*SIKDFFYYN--KVGHVKSECWHNPENKGDYNRRGSWRGRKSNNQRQHGNMAIEEG 230
R + S K+ YN K GHVK ECW N + + G++ + G +A
Sbjct: 219 RSKSRSKKNVKCYNCGKKGHVKKECWSNQKRR---------EGKEPESSNAQGCVA---- 265
Query: 229 SSSQQDEVKKEPICMVQANRREETSTWYIDSGATKHMTERRNWFDSVDPEAYTGNVSLGD 50
S+S E+ +V R+ + W IDSGAT HMT RR WF + +P + G+V +G+
Sbjct: 266 STSDDGEILYSEATIVSEGRKRLSDVWLIDSGATWHMTSRREWFHTYEPIS-GGSVYMGN 324
Query: 49 DSTYEIQGMGDVSLQL 2
D EI G+G + +++
Sbjct: 325 DHALEIAGIGTIKIKM 340
>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
Length = 1291
Score = 74.7 bits (182), Expect = 5e-11
Identities = 37/109 (33%), Positives = 67/109 (61%), Gaps = 4/109 (3%)
Frame = -3
Query: 316 KGDYNRRGSWRGRKSN-NQRQHGNMAIEEGSSSQQDEVKKEPICMVQANRR---EETSTW 149
+G Y WR + N NQR N EE ++ ++++++E + ++ + ++ EE W
Sbjct: 238 RGGYGNGRGWRPHEDNTNQRAPSNKKFEEKANYVEEKIQEEDMLLMASYKKDEQEENHKW 297
Query: 148 YIDSGATKHMTERRNWFDSVDPEAYTGNVSLGDDSTYEIQGMGDVSLQL 2
Y+DSGA+ HM R++ F +D E+ GNV+LGD+S E++G G++ ++L
Sbjct: 298 YLDSGASNHMCGRKSMFAELD-ESVRGNVALGDESKMEVKGKGNILIRL 345
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 69.7 bits (169), Expect = 2e-09
Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 2/198 (1%)
Frame = -3
Query: 589 IEEKLIFEKVVNLLLQHETTISQEHDRDHVLASSSKFKQARGLP**RQRRTSQAV*QA*C 410
I + L F+ V +L+ E+ + +R S KQA L R R T + +
Sbjct: 163 IADTLHFDDVAGAILEEESRRKNKEER------SESSKQAEALTMTRGRSTERGPSGSQN 216
Query: 409 QER*RV*SIKDFFYYN--KVGHVKSECWHNPENKGDYNRRGSWRGRKSNNQRQHGNMAIE 236
R + + Y GHVK ECW+N +N G+ N + + G +
Sbjct: 217 HGRSKSRRKNNIKCYGCGMKGHVKKECWNNKKN-GEKNSEATTSQGCVASTSDDGEILYS 275
Query: 235 EGSSSQQDEVKKEPICMVQANRREETSTWYIDSGATKHMTERRNWFDSVDPEAYTGNVSL 56
E ++S + E R+ W +DSGAT HMT R+WF S +P + G+V +
Sbjct: 276 EAATSSEGE-------------RQLNDVWIMDSGATWHMTPHRDWFYSYEPIS-EGSVYM 321
Query: 55 GDDSTYEIQGMGDVSLQL 2
G+D EI G+G + L++
Sbjct: 322 GNDHALEIAGVGTIRLKM 339
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 69.3 bits (168), Expect = 2e-09
Identities = 58/199 (29%), Positives = 87/199 (43%), Gaps = 3/199 (1%)
Frame = -3
Query: 589 IEEKLIFEKVVNLLLQHETTISQEHDRDHVLASSSKFKQARGLP**RQRRTSQAV*QA*C 410
I ++L F V +L+ E+ + DR KQ L R R T + +
Sbjct: 163 IVDRLSFNDVAGAILEEESRRKNKEDRQ------DSSKQMEALTVTRGRSTERGPSGSQN 216
Query: 409 QER*RV*SIKDFFYYN--KVGHVKSECWHNPENKGDYNRRGSWRGRKSNN-QRQHGNMAI 239
R + YN K GH+K +CW N ++ G KS+ G +A
Sbjct: 217 HGRSTSRRKTNLKCYNCGKRGHLKKDCWSNKKS-----------GEKSSEASTSQGCVA- 264
Query: 238 EEGSSSQQDEVKKEPICMVQANRREETSTWYIDSGATKHMTERRNWFDSVDPEAYTGNVS 59
S+S EV + + T W +DSGAT HMT RR+WF + +P + GNV
Sbjct: 265 ---STSDDGEVLYSEAAVSTKGKNRLTDVWIVDSGATWHMTPRRDWFCTYEPVS-EGNVF 320
Query: 58 LGDDSTYEIQGMGDVSLQL 2
+G+D EI G+G V +++
Sbjct: 321 MGNDHALEIVGIGTVKIKM 339
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 68.2 bits (165), Expect = 5e-09
Identities = 57/198 (28%), Positives = 87/198 (43%), Gaps = 2/198 (1%)
Frame = -3
Query: 589 IEEKLIFEKVVNLLLQHETTISQEHDRDHVLASSSKFKQARGLP**RQRRTSQAV*QA*C 410
I + L F+ V +L+ E+ + +R S KQA L R R T + +
Sbjct: 163 IADTLHFDDVAGAILEEESRRKNKEER------SESSKQAEALTMTRGRSTERGPSGSQN 216
Query: 409 QER*RV*SIKDFFYYN--KVGHVKSECWHNPENKGDYNRRGSWRGRKSNNQRQHGNMAIE 236
R + K+ Y GHVK ECW+ +N G+ N S + G +
Sbjct: 217 HGRSKSRRKKNIKCYGCGMKGHVKKECWNIKKN-GEKNSEASTSQGCVASTSDDGEILYS 275
Query: 235 EGSSSQQDEVKKEPICMVQANRREETSTWYIDSGATKHMTERRNWFDSVDPEAYTGNVSL 56
E ++S + E R W +DSGAT HMT R+WF S +P + G+V +
Sbjct: 276 EAATSSKGE-------------RRLNDVWIMDSGATWHMTPHRDWFYSYEPIS-EGSVYM 321
Query: 55 GDDSTYEIQGMGDVSLQL 2
G+D EI G+G + L++
Sbjct: 322 GNDHALEIAGVGTIRLKM 339
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 68.2 bits (165), Expect = 5e-09
Identities = 57/198 (28%), Positives = 87/198 (43%), Gaps = 2/198 (1%)
Frame = -3
Query: 589 IEEKLIFEKVVNLLLQHETTISQEHDRDHVLASSSKFKQARGLP**RQRRTSQAV*QA*C 410
I + L F+ V +L+ E+ + +R S KQA L R R T + +
Sbjct: 163 ITDTLHFDDVAGAILEEESRRKNKEER------SESSKQAEALTMTRGRSTERGPSGSQN 216
Query: 409 QER*RV*SIKDFFYYN--KVGHVKSECWHNPENKGDYNRRGSWRGRKSNNQRQHGNMAIE 236
R + K+ Y GHVK ECW+ +N G+ N S + G +
Sbjct: 217 HGRSKSRRKKNIKCYGCGMKGHVKKECWNIKKN-GEKNSEASTSQGCVASTSDDGEILYS 275
Query: 235 EGSSSQQDEVKKEPICMVQANRREETSTWYIDSGATKHMTERRNWFDSVDPEAYTGNVSL 56
E ++S + E R W +DSGAT HMT R+WF S +P + G+V +
Sbjct: 276 EAATSSKGE-------------RRLNDVWIMDSGATWHMTPHRDWFFSYEPIS-EGSVYM 321
Query: 55 GDDSTYEIQGMGDVSLQL 2
G+D EI G+G + L++
Sbjct: 322 GNDHALEIAGVGTIRLKM 339
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 68.2 bits (165), Expect = 5e-09
Identities = 57/198 (28%), Positives = 87/198 (43%), Gaps = 2/198 (1%)
Frame = -3
Query: 589 IEEKLIFEKVVNLLLQHETTISQEHDRDHVLASSSKFKQARGLP**RQRRTSQAV*QA*C 410
I + L F+ V +L+ E+ + +R S KQA L R R T + +
Sbjct: 163 IADTLHFDDVAGAILEEESRRKNKEER------SESSKQAEALTMTRGRSTERGPSGSQN 216
Query: 409 QER*RV*SIKDFFYYN--KVGHVKSECWHNPENKGDYNRRGSWRGRKSNNQRQHGNMAIE 236
R + K+ Y GHVK ECW+ +N G+ N S + G +
Sbjct: 217 HGRSKSRRKKNIKCYGCGMKGHVKKECWNIKKN-GEKNSEASTSQGCVASTSDDGEILYS 275
Query: 235 EGSSSQQDEVKKEPICMVQANRREETSTWYIDSGATKHMTERRNWFDSVDPEAYTGNVSL 56
E ++S + E R W +DSGAT HMT R+WF S +P + G+V +
Sbjct: 276 EAATSSKGE-------------RRLNDVWIMDSGATWHMTPHRDWFFSYEPIS-EGSVYM 321
Query: 55 GDDSTYEIQGMGDVSLQL 2
G+D EI G+G + L++
Sbjct: 322 GNDHALEIAGVGTIRLKM 339
>ref|XP_006484589.1| PREDICTED: uncharacterized protein LOC102625372 [Citrus sinensis]
Length = 1258
Score = 67.4 bits (163), Expect = 9e-09
Identities = 53/167 (31%), Positives = 79/167 (47%), Gaps = 2/167 (1%)
Frame = -3
Query: 526 SQEHDRDHVLASSSKFKQARGLP**RQRRTSQAV*QA*CQER*RV*SIKDFFYYN--KVG 353
S+ +++++ ASS +QA+ L R R T + Q R + S K+ Y K G
Sbjct: 44 SRRKNKENIQASS---QQAKALSVTRGRSTERGPSGNQNQGRSKFRSKKNVKCYKCGKKG 100
Query: 352 HVKSECWHNPENKGDYNRRGSWRGRKSNNQRQHGNMAIEEGSSSQQDEVKKEPICMVQAN 173
HVK ECW N + K G++ + G +A S+S E+ V
Sbjct: 101 HVKKECWSNQKRK---------EGKEPESSNAQGCVA----STSDDGEILYSEATTVSEG 147
Query: 172 RREETSTWYIDSGATKHMTERRNWFDSVDPEAYTGNVSLGDDSTYEI 32
R+ + W IDSG T HMT +R WF + +P + G+V +GDD EI
Sbjct: 148 RKRLSDVWLIDSGDTWHMTYQREWFHTYEPIS-GGSVYMGDDHALEI 193
Score = 64.3 bits (155), Expect = 7e-08
Identities = 38/110 (34%), Positives = 53/110 (48%)
Frame = -3
Query: 361 KVGHVKSECWHNPENKGDYNRRGSWRGRKSNNQRQHGNMAIEEGSSSQQDEVKKEPICMV 182
K GHVK ECW N + K G++ + G +A S+S E+ V
Sbjct: 435 KKGHVKKECWSNQKRK---------EGKEPESSNAQGCVA----STSDDGEILYSEATTV 481
Query: 181 QANRREETSTWYIDSGATKHMTERRNWFDSVDPEAYTGNVSLGDDSTYEI 32
R+ + W IDSG T HMT +R WF + +P + G+V +GDD EI
Sbjct: 482 SEGRKRLSDVWLIDSGDTWHMTYQREWFHTYEPIS-GGSVYMGDDHALEI 530
>ref|XP_006603521.1| PREDICTED: uncharacterized protein LOC102659495 [Glycine max]
Length = 321
Score = 66.2 bits (160), Expect = 2e-08
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Frame = -3
Query: 367 YNKVGHVKSECWHNPENKGDYNRRGSWRGRKSNNQRQHGNMAIEEGSSSQQDEVKKEPIC 188
Y K+GH ECW + K K NNQ N+A +EGS S+ +
Sbjct: 138 YQKLGHYARECWQGEDAKN-----------KPNNQ---ANLAQDEGSDSE--------VV 175
Query: 187 MVQANRREETS---TWYIDSGATKHMTERRNWFDSVDPEAYTGNVSLGDDSTYEIQGMGD 17
M+ A E+S +WY+DSG + HMT R+ WF D ++ V DD++ ++G+G
Sbjct: 176 MLMATTSNESSNDISWYLDSGCSTHMTGRKEWFIRFD-DSSKSKVHFADDNSLTVEGIGR 234
Query: 16 VSLQ 5
V+ +
Sbjct: 235 VAFR 238
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 63.9 bits (154), Expect = 9e-08
Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 2/199 (1%)
Frame = -3
Query: 592 IIEEKLIFEKVVNLLLQHETTISQEHDRDHVLASSSKFKQARGLP**RQRRTSQAV*QA* 413
I+ + L+F+ V +L+ E+ + DR L + RG R + + + ++
Sbjct: 163 ILTDYLVFDDVAAAVLEEESRRKNKEDRQVNLQQAEALTVMRGRSTERGQSSGRGRSKS- 221
Query: 412 CQER*RV*SIKDFFYYN--KVGHVKSECWHNPENKGDYNRRGSWRGRKSNNQRQHGNMAI 239
S K+ YN K GH+K +CW+ +N SN Q GN+A
Sbjct: 222 --------SKKNLTCYNCGKKGHLKKDCWNLAQN--------------SNPQ---GNVA- 255
Query: 238 EEGSSSQQDEVKKEPICMVQANRREETSTWYIDSGATKHMTERRNWFDSVDPEAYTGNVS 59
S+S + + R+ W IDSGAT HMT R+ WF +P + G+V
Sbjct: 256 ---STSDDGSALCCEASIAREGRKRFADIWLIDSGATYHMTSRKEWFHHYEPIS-GGSVY 311
Query: 58 LGDDSTYEIQGMGDVSLQL 2
DD EI G+G + L++
Sbjct: 312 SCDDHALEIIGIGTIKLKM 330
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 63.2 bits (152), Expect = 2e-07
Identities = 30/97 (30%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Frame = -3
Query: 283 GRKSNNQRQHGNMAIEEGSSSQQDEVKKEPICMVQANRR---EETSTWYIDSGATKHMTE 113
G ++ + N EE ++ ++++++E + ++ + ++ EE WY+DSGA+ HM
Sbjct: 288 GHYASECKAPSNKKFEEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCG 347
Query: 112 RRNWFDSVDPEAYTGNVSLGDDSTYEIQGMGDVSLQL 2
R++ F +D E+ GNV+LGD+S E++G G++ ++L
Sbjct: 348 RKSMFAELD-ESVRGNVALGDESKMEVKGKGNILIRL 383
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 63.2 bits (152), Expect = 2e-07
Identities = 30/97 (30%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Frame = -3
Query: 283 GRKSNNQRQHGNMAIEEGSSSQQDEVKKEPICMVQANRR---EETSTWYIDSGATKHMTE 113
G ++ + N EE ++ ++++++E + ++ + ++ EE WY+DSGA+ HM
Sbjct: 288 GHYASECKAPSNKKFEEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCG 347
Query: 112 RRNWFDSVDPEAYTGNVSLGDDSTYEIQGMGDVSLQL 2
R++ F +D E+ GNV+LGD+S E++G G++ ++L
Sbjct: 348 RKSMFAELD-ESVRGNVALGDESKMEVKGKGNILIRL 383
>ref|XP_006599785.1| PREDICTED: uncharacterized protein LOC102662211 [Glycine max]
Length = 205
Score = 62.0 bits (149), Expect = 4e-07
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Frame = -3
Query: 331 HNPENKGDYNRRGSWRGRKSNNQ-RQHGNMAIEEGSSSQQDEVKKEPICMVQANRREETS 155
HN + G Y R W+G + N+ + N+A +EGS S+ M+ A +E+S
Sbjct: 73 HNCQKLGHY-ARDCWQGEGAKNKPKNQANLAQDEGSDSEA--------VMLMATTSKESS 123
Query: 154 ---TWYIDSGATKHMTERRNWFDSVDPEAYTGNVSLGDDSTYEIQGMGDVSLQ 5
+WY+DSG + HMT ++ WF S+D ++ V DDS+ +G+G V+ +
Sbjct: 124 IDTSWYLDSGCSTHMTGKKEWFISLD-DSSKSKVRFADDSSLTTEGIGRVAFR 175
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 62.0 bits (149), Expect = 4e-07
Identities = 29/97 (29%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Frame = -3
Query: 283 GRKSNNQRQHGNMAIEEGSSSQQDEVKKEPICMVQANRREETST---WYIDSGATKHMTE 113
G ++ + N EE ++ ++++++E + ++ + +++E WY+DSGA+ HM
Sbjct: 288 GHYASECKAPSNKKFEEKANYVEEKIQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCG 347
Query: 112 RRNWFDSVDPEAYTGNVSLGDDSTYEIQGMGDVSLQL 2
R++ F +D E+ GNV+LGD+S E++G G++ ++L
Sbjct: 348 RKSMFAELD-ESVRGNVALGDESKMEVKGKGNILIRL 383
>emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana]
Length = 544
Score = 61.6 bits (148), Expect = 5e-07
Identities = 29/97 (29%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Frame = -3
Query: 283 GRKSNNQRQHGNMAIEEGSSSQQDEVKKEPICMVQANRR---EETSTWYIDSGATKHMTE 113
G ++ + N +E ++ ++++++E + ++ + ++ EE WY+DSGA+ HM
Sbjct: 304 GHYASECKAPSNKKFKEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCG 363
Query: 112 RRNWFDSVDPEAYTGNVSLGDDSTYEIQGMGDVSLQL 2
R++ F +D E+ GNV+LGD+S E++G G++ ++L
Sbjct: 364 RKSMFAELD-ESVRGNVALGDESKMEVKGKGNILIRL 399
>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1272
Score = 61.6 bits (148), Expect = 5e-07
Identities = 29/97 (29%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Frame = -3
Query: 283 GRKSNNQRQHGNMAIEEGSSSQQDEVKKEPICMVQANRR---EETSTWYIDSGATKHMTE 113
G ++ + N +E ++ ++++++E + ++ + ++ EE WY+DSGA+ HM
Sbjct: 288 GHYASECKAPSNKKFKEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCG 347
Query: 112 RRNWFDSVDPEAYTGNVSLGDDSTYEIQGMGDVSLQL 2
R++ F +D E+ GNV+LGD+S E++G G++ ++L
Sbjct: 348 RKSMFAELD-ESVRGNVALGDESKMEVKGKGNILIRL 383
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 61.2 bits (147), Expect = 6e-07
Identities = 29/97 (29%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Frame = -3
Query: 283 GRKSNNQRQHGNMAIEEGSSSQQDEVKKEPICMVQANRREETST---WYIDSGATKHMTE 113
G ++ + N EE + ++++++E + ++ + +++E WY+DSGA+ HM
Sbjct: 288 GHYASECKAPSNKKFEEKAHYVEEKIQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCG 347
Query: 112 RRNWFDSVDPEAYTGNVSLGDDSTYEIQGMGDVSLQL 2
R++ F +D E+ GNV+LGD+S E++G G++ ++L
Sbjct: 348 RKSMFAELD-ESVRGNVALGDESKMEVKGKGNILIRL 383
>ref|XP_006605109.1| PREDICTED: uncharacterized protein LOC102665838 [Glycine max]
Length = 344
Score = 60.8 bits (146), Expect = 8e-07
Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
Frame = -3
Query: 361 KVGHVKSECWHNPENKGDYNRRGSWRGRKSNNQ-RQHGNMAIEEGSSSQQDEVKKEPICM 185
+VG K C HN + G Y R SW+G+ + N+ N+A +EGS S+ I M
Sbjct: 75 EVGKRKVRC-HNCQKLGHYARY-SWQGKGAKNKPNNQANLAQDEGSDSE--------IVM 124
Query: 184 VQANRREETS---TWYIDSGATKHMTERRNWFDSVDPEAYTGNVSLGDDSTYEIQGMGDV 14
+ A E+S +WY+DSG + M R+ WF S+D + V DDS +G+G V
Sbjct: 125 LMATTSNESSNDTSWYLDSGCSTDMIGRKEWFISLD-DLSKSKVCFEDDSNLTAEGIGRV 183
Query: 13 SLQ 5
+ +
Sbjct: 184 AFR 186
>gb|AAD23679.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 838
Score = 58.5 bits (140), Expect = 4e-06
Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Frame = -3
Query: 361 KVGHVKSEC--WHNPENKGDYNRRGSWRGRKSNNQRQHGN---MAIEEGSSSQQDEVKKE 197
K GH K +C W KG+ S +G SN Q + +A+ E S++ EV E
Sbjct: 249 KEGHFKKQCYVWKEKNKKGN----NSEKGESSNVIGQAADAAALAVREESNADNQEVDNE 304
Query: 196 PICMVQANRREETSTWYIDSGATKHMTERRNWFDSVDPEAYTGNVSLGDDSTYEIQGMGD 17
W +D+G + HMT RR+WF D E+ TG V + + + EI+G+G
Sbjct: 305 ---------------WIMDTGCSFHMTPRRDWFVEFD-ESQTGRVKMANQTYSEIKGIGS 348
Query: 16 VSLQ 5
+ +Q
Sbjct: 349 IRIQ 352