BLASTX nr result
ID: Ephedra28_contig00024719
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00024719
(867 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC06808.1| Putative mediator of RNA polymerase II transcript... 92 3e-16
ref|XP_006576321.1| PREDICTED: mediator of RNA polymerase II tra... 91 7e-16
ref|XP_003562672.1| PREDICTED: uncharacterized protein LOC100846... 89 2e-15
gb|ESW07065.1| hypothetical protein PHAVU_010G099000g [Phaseolus... 89 2e-15
ref|NP_001170168.1| uncharacterized protein LOC100384108 [Zea ma... 89 2e-15
ref|XP_006583297.1| PREDICTED: mediator of RNA polymerase II tra... 88 4e-15
ref|XP_004306783.1| PREDICTED: mediator of RNA polymerase II tra... 88 4e-15
ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|22354904... 88 4e-15
gb|EMS47933.1| Putative mediator of RNA polymerase II transcript... 87 1e-14
ref|XP_003623963.1| Mediator of RNA polymerase II transcription ... 86 2e-14
ref|XP_001755196.1| predicted protein [Physcomitrella patens] gi... 86 2e-14
ref|XP_002466024.1| hypothetical protein SORBIDRAFT_01g050280 [S... 86 2e-14
gb|EMJ21769.1| hypothetical protein PRUPE_ppa000036mg [Prunus pe... 85 3e-14
gb|EMT17889.1| Putative mediator of RNA polymerase II transcript... 85 4e-14
ref|XP_006445035.1| hypothetical protein CICLE_v10018441mg [Citr... 84 9e-14
ref|XP_006445033.1| hypothetical protein CICLE_v10018441mg [Citr... 84 9e-14
ref|XP_002320796.2| hypothetical protein POPTR_0014s080202g, par... 83 1e-13
ref|XP_004510784.1| PREDICTED: mediator of RNA polymerase II tra... 83 1e-13
ref|XP_004492732.1| PREDICTED: mediator of RNA polymerase II tra... 83 1e-13
ref|XP_004492731.1| PREDICTED: mediator of RNA polymerase II tra... 83 1e-13
>gb|EXC06808.1| Putative mediator of RNA polymerase II transcription subunit 12
[Morus notabilis]
Length = 2274
Score = 91.7 bits (226), Expect = 3e-16
Identities = 64/148 (43%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Frame = -1
Query: 867 EKMQADLDRMQLPSAIRFRLQATMXXXXXXXXXXXXXXXXXXPYPSSANTQ---SNNASY 697
E +Q DLDRMQLP IR+R+Q M P + A+ Q SN SY
Sbjct: 2121 ENLQNDLDRMQLPDMIRWRIQTAMPVLLPSVRCFVNCQPPSIPNAAFASLQPVISNPGSY 2180
Query: 696 -GAVGTYQKN----ATRVANAMGKSKASVYQEPEIEIDPWMLLEDXXXXXXXXXXXXXXX 532
G + T Q+N A N GKSK Q+ + EIDPW LLED
Sbjct: 2181 SGNLITSQRNHFPAARSATNTAGKSKPLPLQDHDTEIDPWTLLEDGAGSGPSSSNSGLIG 2240
Query: 531 G-DHVNLKACSWLKGAVRVRRTDLTYIG 451
DH NL+A SWLKGAVRVRR DLTYIG
Sbjct: 2241 SGDHANLRASSWLKGAVRVRRKDLTYIG 2268
>ref|XP_006576321.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X1 [Glycine max]
gi|571443813|ref|XP_006576322.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 12-like isoform
X2 [Glycine max]
Length = 2227
Score = 90.5 bits (223), Expect = 7e-16
Identities = 62/148 (41%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Frame = -1
Query: 867 EKMQADLDRMQLPSAIRFRLQA-------TMXXXXXXXXXXXXXXXXXXPYPSSANTQSN 709
E +Q DLDRMQLP IR+R+QA +M PS N SN
Sbjct: 2078 EALQNDLDRMQLPDTIRWRIQAAMPMLIPSMRCSLSCQPPSVSNSALVCLQPSITNPGSN 2137
Query: 708 NASYGAVGTYQKNATRVA-NAMGKSKASVYQEPEIEIDPWMLLEDXXXXXXXXXXXXXXX 532
++S + +RVA NA GKSK Q+ ++EIDPW LLED
Sbjct: 2138 SSS-STIPQRNSVLSRVASNASGKSKL---QDNDLEIDPWTLLEDGAGSYPSAGNTASIV 2193
Query: 531 G-DHVNLKACSWLKGAVRVRRTDLTYIG 451
DH N++A SWLKGAVRVRRTDLTY+G
Sbjct: 2194 SGDHANIRATSWLKGAVRVRRTDLTYVG 2221
>ref|XP_003562672.1| PREDICTED: uncharacterized protein LOC100846378 [Brachypodium
distachyon]
Length = 2094
Score = 89.4 bits (220), Expect = 2e-15
Identities = 59/144 (40%), Positives = 75/144 (52%), Gaps = 7/144 (4%)
Frame = -1
Query: 861 MQADLDRMQLPSAIRFRLQATMXXXXXXXXXXXXXXXXXXPYPSSANTQSNNASYGAVGT 682
+Q+ LD M+LP IR R+QA M + + QS+ ++ G
Sbjct: 1948 LQSALDHMELPGTIRRRIQAAMPILPPSRHPCIQCQPPQLSLAALSPLQSSTST---AGP 2004
Query: 681 YQKNATRV---ANAMGKSKASV-YQEPEIEIDPWMLLEDXXXXXXXXXXXXXXXG---DH 523
QKNA+ N +SKA + Q+PE+E+DPW LLED G DH
Sbjct: 2005 QQKNASLSWVPTNLSSRSKAGLPSQDPEMEVDPWTLLEDGTSCPSMSSGSNGTSGISGDH 2064
Query: 522 VNLKACSWLKGAVRVRRTDLTYIG 451
NLKACSWLKGAVRVRRT+LTYIG
Sbjct: 2065 ANLKACSWLKGAVRVRRTELTYIG 2088
>gb|ESW07065.1| hypothetical protein PHAVU_010G099000g [Phaseolus vulgaris]
Length = 2215
Score = 89.0 bits (219), Expect = 2e-15
Identities = 60/148 (40%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Frame = -1
Query: 867 EKMQADLDRMQLPSAIRFRLQA-------TMXXXXXXXXXXXXXXXXXXPYPSSANTQSN 709
E +Q DLDRMQLP +R+R+QA +M PS+ N N
Sbjct: 2066 ETLQNDLDRMQLPDTVRWRIQAAMPILIPSMRCSLSCQPPSVSNSALMCIQPSTTNPGVN 2125
Query: 708 NASYGAVGTYQKNATRVA-NAMGKSKASVYQEPEIEIDPWMLLEDXXXXXXXXXXXXXXX 532
++S + +RVA NA GK K Q+ ++EIDPW LLED
Sbjct: 2126 SSS-STIPQRNPALSRVASNASGKPKR---QDNDLEIDPWTLLEDGAGSFPLPGNTASIG 2181
Query: 531 G-DHVNLKACSWLKGAVRVRRTDLTYIG 451
DHVN++A SWLKGAVRVRRTDLTY+G
Sbjct: 2182 SGDHVNIRAASWLKGAVRVRRTDLTYVG 2209
>ref|NP_001170168.1| uncharacterized protein LOC100384108 [Zea mays]
gi|224033995|gb|ACN36073.1| unknown [Zea mays]
gi|413957231|gb|AFW89880.1| hypothetical protein
ZEAMMB73_293016 [Zea mays]
Length = 337
Score = 89.0 bits (219), Expect = 2e-15
Identities = 59/146 (40%), Positives = 75/146 (51%), Gaps = 7/146 (4%)
Frame = -1
Query: 867 EKMQADLDRMQLPSAIRFRLQATMXXXXXXXXXXXXXXXXXXPYPSSANTQSNNASYGAV 688
E +Q+ LD M+LP IR R+QA M + QS+ + V
Sbjct: 189 EGLQSALDHMELPETIRRRIQAAMPLLPPSRHPSLQCQPPQLSLAALTPLQSSTSG---V 245
Query: 687 GTYQKNATRV---ANAMGKSKASV-YQEPEIEIDPWMLLEDXXXXXXXXXXXXXXXG--- 529
G QK+ + N G+SKA++ +PE+E+DPW LLED G
Sbjct: 246 GPQQKSCSASWVPTNVSGRSKAALPSHDPEMEVDPWNLLEDGTSCPSTASGSHGASGVTG 305
Query: 528 DHVNLKACSWLKGAVRVRRTDLTYIG 451
DH NLKACSWLKGAVRVRRT+LTYIG
Sbjct: 306 DHANLKACSWLKGAVRVRRTELTYIG 331
>ref|XP_006583297.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X1 [Glycine max]
gi|571465238|ref|XP_006583298.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 12-like isoform
X2 [Glycine max]
Length = 2222
Score = 88.2 bits (217), Expect = 4e-15
Identities = 61/148 (41%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Frame = -1
Query: 867 EKMQADLDRMQLPSAIRFRLQA-------TMXXXXXXXXXXXXXXXXXXPYPSSANTQSN 709
E +Q DLDRMQLP IR+ +QA +M PS N SN
Sbjct: 2073 ETLQNDLDRMQLPDTIRWHIQAAMPILIPSMRCSLSCQPPSISNSALVCLQPSITNPGSN 2132
Query: 708 NASYGAVGTYQKNATRVA-NAMGKSKASVYQEPEIEIDPWMLLEDXXXXXXXXXXXXXXX 532
++S + +RVA NA GKSK Q+ ++EIDPW LLED
Sbjct: 2133 SSS-STIPQRNPVLSRVASNASGKSKQ---QDNDLEIDPWTLLEDGTGSYSSAGNTASIG 2188
Query: 531 G-DHVNLKACSWLKGAVRVRRTDLTYIG 451
DH N++A SWLKGAVRVRRTDLTY+G
Sbjct: 2189 SGDHANIRATSWLKGAVRVRRTDLTYVG 2216
>ref|XP_004306783.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Fragaria vesca subsp. vesca]
Length = 2261
Score = 88.2 bits (217), Expect = 4e-15
Identities = 60/148 (40%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Frame = -1
Query: 867 EKMQADLDRMQLPSAIRFRLQATMXXXXXXXXXXXXXXXXXXPYPSSANTQSNNASYGA- 691
E +Q DLDRMQLP ++R+R+Q M P + A Q + ++ G
Sbjct: 2108 ENLQNDLDRMQLPDSVRWRIQTAMPVIIPSIRCFVSCHPPPVPNMALAVLQPSTSNSGIY 2167
Query: 690 ---VGTYQKN----ATRVANAMGKSKASVYQEPEIEIDPWMLLEDXXXXXXXXXXXXXXX 532
+ T QKN A V GKSK Q+ ++EIDPW LLED
Sbjct: 2168 STNLNTPQKNQFPLARTVTTVTGKSKPLPSQDNDMEIDPWTLLEDGAGSGPSSCNSALIG 2227
Query: 531 G-DHVNLKACSWLKGAVRVRRTDLTYIG 451
DH NL+A SWLKGAVRVRR DLTYIG
Sbjct: 2228 SADHGNLRASSWLKGAVRVRRKDLTYIG 2255
>ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|223549043|gb|EEF50532.1| CRP,
putative [Ricinus communis]
Length = 2264
Score = 88.2 bits (217), Expect = 4e-15
Identities = 61/146 (41%), Positives = 76/146 (52%), Gaps = 7/146 (4%)
Frame = -1
Query: 867 EKMQADLDRMQLPSAIRFRLQATMXXXXXXXXXXXXXXXXXXPYPSSANTQSNNASYGAV 688
E +Q DLDRMQLP +IR+R+QA M P + A+ Q + G
Sbjct: 2113 ETLQNDLDRMQLPGSIRWRIQAAMPVLLPSARWSISCQLPTVPIAAVASLQPSITISGLY 2172
Query: 687 GTY--QKNA---TRVANAMGKSKA-SVYQEPEIEIDPWMLLEDXXXXXXXXXXXXXXXG- 529
QKN R N G+SK+ + Q+ ++EIDPW LLED G
Sbjct: 2173 AGMPPQKNPLPLARTTNVPGRSKSLPLQQDNDMEIDPWTLLEDGTGSGPSSSNAAVVSGG 2232
Query: 528 DHVNLKACSWLKGAVRVRRTDLTYIG 451
DH NL+A +WLKGAVRVRRTDLTYIG
Sbjct: 2233 DHANLRASAWLKGAVRVRRTDLTYIG 2258
>gb|EMS47933.1| Putative mediator of RNA polymerase II transcription subunit 12
[Triticum urartu]
Length = 2115
Score = 86.7 bits (213), Expect = 1e-14
Identities = 56/141 (39%), Positives = 72/141 (51%), Gaps = 4/141 (2%)
Frame = -1
Query: 861 MQADLDRMQLPSAIRFRLQATMXXXXXXXXXXXXXXXXXXPYPSSANTQSNNASYGAVGT 682
+Q+ LD M+LP AIR R+QA M + + QS ++ G
Sbjct: 1969 LQSALDHMELPGAIRRRIQAAMPILPPARHPSIQSQPPQLSLAALSPLQSTPSTSGPQQK 2028
Query: 681 YQKNATRVANAMGKSKASVY-QEPEIEIDPWMLLEDXXXXXXXXXXXXXXXG---DHVNL 514
++ N +SKA + Q+PE+E+DPW LLED G DH NL
Sbjct: 2029 STSHSWVPTNISSRSKAVLPPQDPEMEVDPWTLLEDGTSCPATSSGSNSASGIAPDHSNL 2088
Query: 513 KACSWLKGAVRVRRTDLTYIG 451
KACSWLKGAVRVRRT+LTYIG
Sbjct: 2089 KACSWLKGAVRVRRTELTYIG 2109
>ref|XP_003623963.1| Mediator of RNA polymerase II transcription subunit [Medicago
truncatula] gi|87240976|gb|ABD32834.1| 2-oxo acid
dehydrogenase, lipoyl-binding site [Medicago truncatula]
gi|355498978|gb|AES80181.1| Mediator of RNA polymerase II
transcription subunit [Medicago truncatula]
Length = 2270
Score = 85.9 bits (211), Expect = 2e-14
Identities = 57/145 (39%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Frame = -1
Query: 867 EKMQADLDRMQLPSAIRFRLQATMXXXXXXXXXXXXXXXXXXPYPSSANTQSN----NAS 700
E +Q LD MQLP +IR R+QA M S A+ QSN ++
Sbjct: 2125 ETLQNHLDCMQLPDSIRLRIQAAMPVLPPSTRCSFSCQPPSVANSSLASLQSNIKNSGSN 2184
Query: 699 YGAVGTYQKNATRVAN--AMGKSKASVYQEPEIEIDPWMLLEDXXXXXXXXXXXXXXXGD 526
G++ T Q++ ++ A GKSK Q+ + E+DPW LLED D
Sbjct: 2185 SGSLATSQRSPVPLSRTAASGKSKQ---QDNDFEVDPWTLLEDGAGSCPSASNVGSG--D 2239
Query: 525 HVNLKACSWLKGAVRVRRTDLTYIG 451
VN++A SWLKGAVRVRRTDLTY+G
Sbjct: 2240 RVNIRAASWLKGAVRVRRTDLTYVG 2264
>ref|XP_001755196.1| predicted protein [Physcomitrella patens] gi|162693789|gb|EDQ80140.1|
predicted protein [Physcomitrella patens]
Length = 2111
Score = 85.9 bits (211), Expect = 2e-14
Identities = 58/145 (40%), Positives = 70/145 (48%), Gaps = 6/145 (4%)
Frame = -1
Query: 867 EKMQADLDRMQLPSAIRFRLQATMXXXXXXXXXXXXXXXXXXPYP--SSANTQSNNASYG 694
E+MQ DL+ MQLP IR RLQA P S + N++ G
Sbjct: 1965 ERMQVDLEHMQLPCGIRARLQAAFPLLPPTPVTTVSAAPPQVPVSVLSQLQVKGFNSTLG 2024
Query: 693 AVGTY----QKNATRVANAMGKSKASVYQEPEIEIDPWMLLEDXXXXXXXXXXXXXXXGD 526
TY QK+ + N GK KA + E+E+DPW LLED
Sbjct: 2025 VSTTYPGSAQKSLYPLENNAGKLKAVTSADSEMEVDPWTLLEDGVGASSGPIGSGEVG-- 2082
Query: 525 HVNLKACSWLKGAVRVRRTDLTYIG 451
NLKAC+WLKGAVRVRRTDL+YIG
Sbjct: 2083 --NLKACAWLKGAVRVRRTDLSYIG 2105
>ref|XP_002466024.1| hypothetical protein SORBIDRAFT_01g050280 [Sorghum bicolor]
gi|241919878|gb|EER93022.1| hypothetical protein
SORBIDRAFT_01g050280 [Sorghum bicolor]
Length = 2201
Score = 85.5 bits (210), Expect = 2e-14
Identities = 57/145 (39%), Positives = 73/145 (50%), Gaps = 6/145 (4%)
Frame = -1
Query: 867 EKMQADLDRMQLPSAIRFRLQATMXXXXXXXXXXXXXXXXXXPYPSSANTQSNNASYGAV 688
E +Q+ LD M+LP IR R+QA M + QS+ +
Sbjct: 2054 EGLQSALDHMELPETIRRRIQAAMPLLPPSRHPSMQCQPPQLSLAALTPLQSSTSG---A 2110
Query: 687 GTYQKNATR--VANAMGKSKASV-YQEPEIEIDPWMLLEDXXXXXXXXXXXXXXXG---D 526
G QK++ N +SKA++ +PE+E+DPW LLED G D
Sbjct: 2111 GPQQKSSVSWVPTNVSSRSKAALPSHDPEMEVDPWNLLEDGTSCPSTTSGSNGASGVTGD 2170
Query: 525 HVNLKACSWLKGAVRVRRTDLTYIG 451
H NLKACSWLKGAVRVRRT+LTYIG
Sbjct: 2171 HANLKACSWLKGAVRVRRTELTYIG 2195
>gb|EMJ21769.1| hypothetical protein PRUPE_ppa000036mg [Prunus persica]
Length = 2210
Score = 85.1 bits (209), Expect = 3e-14
Identities = 59/148 (39%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Frame = -1
Query: 867 EKMQADLDRMQLPSAIRFRLQATMXXXXXXXXXXXXXXXXXXPYPSSANTQSNNASYGAV 688
+ +Q+DLDRMQLP IR+R+Q M P + A Q++ ++ G
Sbjct: 2057 DHLQSDLDRMQLPERIRWRIQTAMPVVVPSIRCFVSCQPPPVPNTALAVLQTSISTPGFY 2116
Query: 687 GTY----QKN----ATRVANAMGKSKASVYQEPEIEIDPWMLLEDXXXXXXXXXXXXXXX 532
Q+N A VAN GKSK+ Q+ +++IDPW LLED
Sbjct: 2117 SGISNPPQRNQVPLARTVANIPGKSKSLPSQDYDMDIDPWTLLEDGAGSGPSSSNSALIG 2176
Query: 531 G-DHVNLKACSWLKGAVRVRRTDLTYIG 451
DH NL+A SWLKGAVRVRR DLTYIG
Sbjct: 2177 SADHGNLRASSWLKGAVRVRRKDLTYIG 2204
>gb|EMT17889.1| Putative mediator of RNA polymerase II transcription subunit 12
[Aegilops tauschii]
Length = 2117
Score = 84.7 bits (208), Expect = 4e-14
Identities = 55/141 (39%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Frame = -1
Query: 861 MQADLDRMQLPSAIRFRLQATMXXXXXXXXXXXXXXXXXXPYPSSANTQSNNASYGAVGT 682
+Q+ LD M+LP AIR R+QA M + + QS ++ G
Sbjct: 1971 LQSALDHMELPGAIRRRIQAAMPILPPARHPSIQCQPSQLSLAALSPLQSTPSTSGPQQK 2030
Query: 681 YQKNATRVANAMGKSKASVY-QEPEIEIDPWMLLEDXXXXXXXXXXXXXXXG---DHVNL 514
++ N +SKA + Q+PE+E+DPW LLED G DH NL
Sbjct: 2031 STSHSWVPTNISSRSKAVLPPQDPEMEVDPWTLLEDGTSCPSTSSGSNSASGIAPDHSNL 2090
Query: 513 KACSWLKGAVRVRRTDLTYIG 451
KACSWLKGAVRVRR +LTYIG
Sbjct: 2091 KACSWLKGAVRVRRAELTYIG 2111
>ref|XP_006445035.1| hypothetical protein CICLE_v10018441mg [Citrus clementina]
gi|567905096|ref|XP_006445036.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|567905098|ref|XP_006445037.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|568876055|ref|XP_006491101.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 12-like isoform
X1 [Citrus sinensis] gi|568876057|ref|XP_006491102.1|
PREDICTED: mediator of RNA polymerase II transcription
subunit 12-like isoform X2 [Citrus sinensis]
gi|557547297|gb|ESR58275.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|557547298|gb|ESR58276.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|557547299|gb|ESR58277.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
Length = 2277
Score = 83.6 bits (205), Expect = 9e-14
Identities = 58/148 (39%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Frame = -1
Query: 867 EKMQADLDRMQLPSAIRFRLQATMXXXXXXXXXXXXXXXXXXPYPSSANTQSN----NAS 700
E +Q DLD MQLP +R+R+QA + P + A+ Q + AS
Sbjct: 2124 ESLQNDLDHMQLPDTVRWRIQAAIPILLPSVRCSLTCQPPSVPVAALASLQPSISVSGAS 2183
Query: 699 YGAVGTYQKNAT---RVANAMGKSKA-SVYQEPEIEIDPWMLLEDXXXXXXXXXXXXXXX 532
G + Q+N R A GKSK + Q+ ++EIDPW LLED
Sbjct: 2184 PGNLNLPQRNPVPLARSATNTGKSKPIPLQQDSDMEIDPWTLLEDGAGSGPSSSNTAAIG 2243
Query: 531 G-DHVNLKACSWLKGAVRVRRTDLTYIG 451
D NL+A SWLKGA+RVRRTDLTYIG
Sbjct: 2244 SGDQANLQAASWLKGAIRVRRTDLTYIG 2271
>ref|XP_006445033.1| hypothetical protein CICLE_v10018441mg [Citrus clementina]
gi|567905092|ref|XP_006445034.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|567905100|ref|XP_006445038.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|568876059|ref|XP_006491103.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 12-like isoform
X3 [Citrus sinensis] gi|557547295|gb|ESR58273.1|
hypothetical protein CICLE_v10018441mg [Citrus
clementina] gi|557547296|gb|ESR58274.1| hypothetical
protein CICLE_v10018441mg [Citrus clementina]
gi|557547300|gb|ESR58278.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
Length = 2239
Score = 83.6 bits (205), Expect = 9e-14
Identities = 58/148 (39%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Frame = -1
Query: 867 EKMQADLDRMQLPSAIRFRLQATMXXXXXXXXXXXXXXXXXXPYPSSANTQSN----NAS 700
E +Q DLD MQLP +R+R+QA + P + A+ Q + AS
Sbjct: 2086 ESLQNDLDHMQLPDTVRWRIQAAIPILLPSVRCSLTCQPPSVPVAALASLQPSISVSGAS 2145
Query: 699 YGAVGTYQKNAT---RVANAMGKSKA-SVYQEPEIEIDPWMLLEDXXXXXXXXXXXXXXX 532
G + Q+N R A GKSK + Q+ ++EIDPW LLED
Sbjct: 2146 PGNLNLPQRNPVPLARSATNTGKSKPIPLQQDSDMEIDPWTLLEDGAGSGPSSSNTAAIG 2205
Query: 531 G-DHVNLKACSWLKGAVRVRRTDLTYIG 451
D NL+A SWLKGA+RVRRTDLTYIG
Sbjct: 2206 SGDQANLQAASWLKGAIRVRRTDLTYIG 2233
>ref|XP_002320796.2| hypothetical protein POPTR_0014s080202g, partial [Populus
trichocarpa] gi|550323753|gb|EEE99111.2| hypothetical
protein POPTR_0014s080202g, partial [Populus trichocarpa]
Length = 1089
Score = 83.2 bits (204), Expect = 1e-13
Identities = 60/147 (40%), Positives = 73/147 (49%), Gaps = 8/147 (5%)
Frame = -1
Query: 867 EKMQADLDRMQLPSAIRFRLQATMXXXXXXXXXXXXXXXXXXPYPSSANTQSNNASYGAV 688
E +Q DLDRMQLP I+ R+Q+ M P + A+ Q + A G
Sbjct: 937 ESLQNDLDRMQLPGKIQLRIQSAMPILLPSVRCLISCQPPPVPTAAVASLQPSIAISGFY 996
Query: 687 G--TYQKNATRVA----NAMGKSKA-SVYQEPEIEIDPWMLLEDXXXXXXXXXXXXXXXG 529
QKN +A N KSK + Q+ ++EIDPW LLED
Sbjct: 997 NGSNAQKNPAPLARSANNISTKSKPLPLQQDGDMEIDPWTLLEDGTGSGPSSSNISVIGS 1056
Query: 528 -DHVNLKACSWLKGAVRVRRTDLTYIG 451
DH NL+A SWLKGAVRVRRTDLTYIG
Sbjct: 1057 IDHANLRASSWLKGAVRVRRTDLTYIG 1083
>ref|XP_004510784.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Cicer arietinum]
Length = 2223
Score = 83.2 bits (204), Expect = 1e-13
Identities = 56/141 (39%), Positives = 70/141 (49%), Gaps = 2/141 (1%)
Frame = -1
Query: 867 EKMQADLDRMQLPSAIRFRLQATMXXXXXXXXXXXXXXXXXXPYPSSANTQSNNASYGAV 688
E +Q D+DRMQ+P IR+R+QA M + + N+S A
Sbjct: 2078 ESLQNDMDRMQVPDTIRWRIQAAMPVLFPSIRCSFSCQPPPVSISALVSVPGFNSSSSAN 2137
Query: 687 GTYQKNATRVANAMGKSKASVYQEPEIEI-DPWMLLEDXXXXXXXXXXXXXXXG-DHVNL 514
+RVA A S S Q+ E+EI DPW LLED G DH N+
Sbjct: 2138 PPRNPVLSRVA-ANASSGKSKQQDSELEIIDPWTLLEDGAGSCPSASNTASIGGGDHANI 2196
Query: 513 KACSWLKGAVRVRRTDLTYIG 451
+A SWLKGAVRVRRTDLTY+G
Sbjct: 2197 RAASWLKGAVRVRRTDLTYVG 2217
>ref|XP_004492732.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X2 [Cicer arietinum]
gi|502105137|ref|XP_004492733.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 12-like isoform
X3 [Cicer arietinum]
Length = 2003
Score = 82.8 bits (203), Expect = 1e-13
Identities = 56/145 (38%), Positives = 73/145 (50%), Gaps = 6/145 (4%)
Frame = -1
Query: 867 EKMQADLDRMQLPSAIRFRLQATMXXXXXXXXXXXXXXXXXXPYPSSANTQSN----NAS 700
E +Q LD MQLP +IR+R+QA M P S + Q N +
Sbjct: 1858 ETLQNHLDNMQLPDSIRWRIQAAMPLLPPSTRCSFSCQPPFVPNSSLVSLQPNITNSGFN 1917
Query: 699 YGAVGTYQKNATRVAN--AMGKSKASVYQEPEIEIDPWMLLEDXXXXXXXXXXXXXXXGD 526
Y +V Q++ ++ A GKSK Q+ + E+DPW LLED D
Sbjct: 1918 YSSVAIPQRSPVPLSRTAASGKSKQ---QDDDFEVDPWTLLEDGAGSCPSASNVGNG--D 1972
Query: 525 HVNLKACSWLKGAVRVRRTDLTYIG 451
VN++A SWLKGAVRVRRTDLTY+G
Sbjct: 1973 RVNIRAASWLKGAVRVRRTDLTYVG 1997
>ref|XP_004492731.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X1 [Cicer arietinum]
Length = 2258
Score = 82.8 bits (203), Expect = 1e-13
Identities = 56/145 (38%), Positives = 73/145 (50%), Gaps = 6/145 (4%)
Frame = -1
Query: 867 EKMQADLDRMQLPSAIRFRLQATMXXXXXXXXXXXXXXXXXXPYPSSANTQSN----NAS 700
E +Q LD MQLP +IR+R+QA M P S + Q N +
Sbjct: 2113 ETLQNHLDNMQLPDSIRWRIQAAMPLLPPSTRCSFSCQPPFVPNSSLVSLQPNITNSGFN 2172
Query: 699 YGAVGTYQKNATRVAN--AMGKSKASVYQEPEIEIDPWMLLEDXXXXXXXXXXXXXXXGD 526
Y +V Q++ ++ A GKSK Q+ + E+DPW LLED D
Sbjct: 2173 YSSVAIPQRSPVPLSRTAASGKSKQ---QDDDFEVDPWTLLEDGAGSCPSASNVGNG--D 2227
Query: 525 HVNLKACSWLKGAVRVRRTDLTYIG 451
VN++A SWLKGAVRVRRTDLTY+G
Sbjct: 2228 RVNIRAASWLKGAVRVRRTDLTYVG 2252