BLASTX nr result
ID: Ephedra28_contig00024626
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00024626
(384 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006361119.1| PREDICTED: zinc finger CCHC domain-containin... 48 3e-13
ref|XP_002527559.1| cellular nucleic acid binding protein, putat... 58 6e-12
ref|XP_006605629.1| PREDICTED: zinc finger CCHC domain-containin... 54 2e-11
ref|XP_006605630.1| PREDICTED: zinc finger CCHC domain-containin... 54 2e-11
ref|XP_004173390.1| PREDICTED: DNA-binding protein HEXBP-like, p... 43 3e-11
ref|XP_004137358.1| PREDICTED: cold shock domain-containing prot... 43 3e-11
ref|XP_002272646.2| PREDICTED: uncharacterized protein LOC100259... 52 6e-11
emb|CBI24395.3| unnamed protein product [Vitis vinifera] 52 6e-11
gb|ABA94400.2| Zinc knuckle family protein, expressed [Oryza sat... 53 7e-11
ref|XP_004502023.1| PREDICTED: uncharacterized protein LOC101499... 56 1e-10
ref|XP_004502024.1| PREDICTED: uncharacterized protein LOC101499... 56 1e-10
ref|XP_003542327.1| PREDICTED: zinc finger CCHC domain-containin... 54 4e-10
ref|XP_006593907.1| PREDICTED: zinc finger CCHC domain-containin... 54 4e-10
gb|ACU17716.1| unknown [Glycine max] 54 4e-10
gb|EPS59973.1| hypothetical protein M569_14831, partial [Genlise... 49 4e-10
gb|EOY09642.1| Zinc knuckle (CCHC-type) family protein isoform 1... 47 5e-10
ref|XP_006340438.1| PREDICTED: uncharacterized protein LOC102593... 52 5e-10
gb|EOY09643.1| Uncharacterized protein isoform 2, partial [Theob... 47 5e-10
ref|XP_006424035.1| hypothetical protein CICLE_v10028298mg [Citr... 53 1e-09
ref|XP_006424033.1| hypothetical protein CICLE_v10028298mg [Citr... 53 1e-09
>ref|XP_006361119.1| PREDICTED: zinc finger CCHC domain-containing protein 7-like
[Solanum tuberosum]
Length = 470
Score = 47.8 bits (112), Expect(3) = 3e-13
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3
Query: 63 KEDQCYICKMLGHLCRIDIVDGCQRDISCYNCGEFVHSGM 182
KE CYICK GHLC D R+ SCY CG H+G+
Sbjct: 229 KEILCYICKSFGHLCCAKYPDSGPREFSCYRCGLLGHTGL 268
Score = 37.7 bits (86), Expect(3) = 3e-13
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 4 CGDLGHDMMSCRKGYKPEDLKKI 72
CGD GH+M SCR Y +DLK+I
Sbjct: 209 CGDSGHEMFSCRNNYSDDDLKEI 231
Score = 34.3 bits (77), Expect(3) = 3e-13
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 295 SKKGKTK-EGSARVCYICGEEGHIARGC 375
+ +G+T GS CY CGEEGH AR C
Sbjct: 272 ASRGETSGTGSLNPCYRCGEEGHFAREC 299
>ref|XP_002527559.1| cellular nucleic acid binding protein, putative [Ricinus communis]
gi|223533051|gb|EEF34811.1| cellular nucleic acid
binding protein, putative [Ricinus communis]
Length = 497
Score = 57.8 bits (138), Expect(2) = 6e-12
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3
Query: 63 KEDQCYICKMLGHLCRIDIVDGCQRDISCYNCGEFVHSG 179
KE QCYICK GHLC ++ VD R++SCY CGE H+G
Sbjct: 276 KEIQCYICKNGGHLCCVNFVDNSPREVSCYKCGELGHTG 314
Score = 38.1 bits (87), Expect(2) = 6e-12
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +1
Query: 4 CGDLGHDMMSCRKGYKPEDLKKI 72
CGD GHDM SCR Y +DLK+I
Sbjct: 256 CGDSGHDMFSCRNSYPLDDLKEI 278
>ref|XP_006605629.1| PREDICTED: zinc finger CCHC domain-containing protein 7-like
isoform X1 [Glycine max]
Length = 552
Score = 53.9 bits (128), Expect(2) = 2e-11
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +3
Query: 63 KEDQCYICKMLGHLCRIDIVDGCQRDISCYNCGEFVHSGM 182
KE QCY+CK +GHLC ++ D +ISCY CG+ H+G+
Sbjct: 258 KEIQCYVCKRVGHLCCVNTDDATPGEISCYKCGQLGHTGL 297
Score = 40.0 bits (92), Expect(2) = 2e-11
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +1
Query: 4 CGDLGHDMMSCRKGYKPEDLKKI 72
CG+ GHDM SCR Y P+DLK+I
Sbjct: 238 CGNSGHDMFSCRNDYSPDDLKEI 260
>ref|XP_006605630.1| PREDICTED: zinc finger CCHC domain-containing protein 7-like
isoform X2 [Glycine max]
Length = 538
Score = 53.9 bits (128), Expect(2) = 2e-11
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +3
Query: 63 KEDQCYICKMLGHLCRIDIVDGCQRDISCYNCGEFVHSGM 182
KE QCY+CK +GHLC ++ D +ISCY CG+ H+G+
Sbjct: 244 KEIQCYVCKRVGHLCCVNTDDATPGEISCYKCGQLGHTGL 283
Score = 40.0 bits (92), Expect(2) = 2e-11
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +1
Query: 4 CGDLGHDMMSCRKGYKPEDLKKI 72
CG+ GHDM SCR Y P+DLK+I
Sbjct: 224 CGNSGHDMFSCRNDYSPDDLKEI 246
>ref|XP_004173390.1| PREDICTED: DNA-binding protein HEXBP-like, partial [Cucumis
sativus]
Length = 425
Score = 43.1 bits (100), Expect(3) = 3e-11
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +3
Query: 63 KEDQCYICKMLGHLCRIDIVDGCQRDISCYNCGEFVHSGM 182
K+ QCYIC+ GHLC ++ +SCY CG+ H+G+
Sbjct: 279 KKIQCYICQKFGHLCCVNFTSDTS-VVSCYKCGQTGHTGL 317
Score = 38.1 bits (87), Expect(3) = 3e-11
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +1
Query: 4 CGDLGHDMMSCRKGYKPEDLKKI 72
CGD GHDM SC+ Y +DLKKI
Sbjct: 259 CGDSGHDMFSCQNHYADDDLKKI 281
Score = 32.0 bits (71), Expect(3) = 3e-11
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Frame = +1
Query: 292 KSKKGKTKEGSARV----CYICGEEGHIARGC 375
KS K +E S CY CGEEGH AR C
Sbjct: 353 KSGKRNREEASGAASPNPCYKCGEEGHFAREC 384
>ref|XP_004137358.1| PREDICTED: cold shock domain-containing protein 3-like [Cucumis
sativus]
Length = 406
Score = 43.1 bits (100), Expect(3) = 3e-11
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +3
Query: 63 KEDQCYICKMLGHLCRIDIVDGCQRDISCYNCGEFVHSGM 182
K+ QCYIC+ GHLC ++ +SCY CG+ H+G+
Sbjct: 279 KKIQCYICQKFGHLCCVNFTSDTS-VVSCYKCGQTGHTGL 317
Score = 38.1 bits (87), Expect(3) = 3e-11
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +1
Query: 4 CGDLGHDMMSCRKGYKPEDLKKI 72
CGD GHDM SC+ Y +DLKKI
Sbjct: 259 CGDSGHDMFSCQNHYADDDLKKI 281
Score = 32.0 bits (71), Expect(3) = 3e-11
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Frame = +1
Query: 292 KSKKGKTKEGSARV----CYICGEEGHIARGC 375
KS K +E S CY CGEEGH AR C
Sbjct: 353 KSGKRNREEASGAASPNPCYKCGEEGHFAREC 384
>ref|XP_002272646.2| PREDICTED: uncharacterized protein LOC100259916 [Vitis vinifera]
Length = 481
Score = 52.4 bits (124), Expect(2) = 6e-11
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +3
Query: 63 KEDQCYICKMLGHLCRIDIVDGCQRDISCYNCGEFVHSGM 182
KE QCYICK GHLC I+ VD + SCY CG+ H+G+
Sbjct: 266 KEIQCYICKSFGHLCCINYVDTGPIEPSCYKCGQLGHTGL 305
Score = 40.0 bits (92), Expect(2) = 6e-11
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +1
Query: 4 CGDLGHDMMSCRKGYKPEDLKKI 72
CGD HDM SCR Y PEDLK+I
Sbjct: 246 CGDSRHDMFSCRNDYSPEDLKEI 268
>emb|CBI24395.3| unnamed protein product [Vitis vinifera]
Length = 441
Score = 52.4 bits (124), Expect(2) = 6e-11
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +3
Query: 63 KEDQCYICKMLGHLCRIDIVDGCQRDISCYNCGEFVHSGM 182
KE QCYICK GHLC I+ VD + SCY CG+ H+G+
Sbjct: 217 KEIQCYICKSFGHLCCINYVDTGPIEPSCYKCGQLGHTGL 256
Score = 40.0 bits (92), Expect(2) = 6e-11
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +1
Query: 4 CGDLGHDMMSCRKGYKPEDLKKI 72
CGD HDM SCR Y PEDLK+I
Sbjct: 197 CGDSRHDMFSCRNDYSPEDLKEI 219
>gb|ABA94400.2| Zinc knuckle family protein, expressed [Oryza sativa Japonica
Group]
Length = 232
Score = 52.8 bits (125), Expect(2) = 7e-11
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +3
Query: 63 KEDQCYICKMLGHLCRIDIVDGCQRDISCYNCGEFVHSGM 182
KE +CY+C GHLC D D C +++SCYNC + H+G+
Sbjct: 14 KEIKCYVCNQKGHLCCADFSDICPKEVSCYNCAQPGHTGL 53
Score = 39.7 bits (91), Expect(2) = 7e-11
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 277 G*GYVKSKKGKTKEGSARVCYICGEEGHIARGCKK 381
G G K ++ + + +CY CGEEGH ARGC K
Sbjct: 52 GLGCAKQRREASTAATPTLCYKCGEEGHFARGCTK 86
>ref|XP_004502023.1| PREDICTED: uncharacterized protein LOC101499078 isoform X1 [Cicer
arietinum]
Length = 528
Score = 55.8 bits (133), Expect(2) = 1e-10
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = +3
Query: 63 KEDQCYICKMLGHLCRIDIVDGCQRDISCYNCGEFVHSGM 182
KE QCY+CK GHLC ++ VD +ISCY CG+ H+G+
Sbjct: 229 KEIQCYLCKTFGHLCCVNTVDAIPGEISCYKCGQMGHTGL 268
Score = 35.4 bits (80), Expect(2) = 1e-10
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 4 CGDLGHDMMSCRKGYKPEDLKKI 72
CG+ GHDM SC+ Y +DLK+I
Sbjct: 209 CGNSGHDMFSCKNDYSRDDLKEI 231
>ref|XP_004502024.1| PREDICTED: uncharacterized protein LOC101499078 isoform X2 [Cicer
arietinum]
Length = 505
Score = 55.8 bits (133), Expect(2) = 1e-10
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = +3
Query: 63 KEDQCYICKMLGHLCRIDIVDGCQRDISCYNCGEFVHSGM 182
KE QCY+CK GHLC ++ VD +ISCY CG+ H+G+
Sbjct: 229 KEIQCYLCKTFGHLCCVNTVDAIPGEISCYKCGQMGHTGL 268
Score = 35.4 bits (80), Expect(2) = 1e-10
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 4 CGDLGHDMMSCRKGYKPEDLKKI 72
CG+ GHDM SC+ Y +DLK+I
Sbjct: 209 CGNSGHDMFSCKNDYSRDDLKEI 231
>ref|XP_003542327.1| PREDICTED: zinc finger CCHC domain-containing protein 7-like
isoform X1 [Glycine max]
Length = 529
Score = 54.3 bits (129), Expect(2) = 4e-10
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +3
Query: 63 KEDQCYICKMLGHLCRIDIVDGCQRDISCYNCGEFVHSGM 182
KE QCY+CK LGHLC ++ D +ISCY CG+ H G+
Sbjct: 254 KEIQCYVCKRLGHLCCVNTDDATAGEISCYKCGQLGHMGL 293
Score = 35.4 bits (80), Expect(2) = 4e-10
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 4 CGDLGHDMMSCRKGYKPEDLKKI 72
CG+ GHD+ SCR Y +DLK+I
Sbjct: 234 CGNSGHDIFSCRNDYSQDDLKEI 256
>ref|XP_006593907.1| PREDICTED: zinc finger CCHC domain-containing protein 7-like
isoform X2 [Glycine max]
Length = 523
Score = 54.3 bits (129), Expect(2) = 4e-10
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +3
Query: 63 KEDQCYICKMLGHLCRIDIVDGCQRDISCYNCGEFVHSGM 182
KE QCY+CK LGHLC ++ D +ISCY CG+ H G+
Sbjct: 254 KEIQCYVCKRLGHLCCVNTDDATAGEISCYKCGQLGHMGL 293
Score = 35.4 bits (80), Expect(2) = 4e-10
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 4 CGDLGHDMMSCRKGYKPEDLKKI 72
CG+ GHD+ SCR Y +DLK+I
Sbjct: 234 CGNSGHDIFSCRNDYSQDDLKEI 256
>gb|ACU17716.1| unknown [Glycine max]
Length = 389
Score = 54.3 bits (129), Expect(2) = 4e-10
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +3
Query: 63 KEDQCYICKMLGHLCRIDIVDGCQRDISCYNCGEFVHSGM 182
KE QCY+CK LGHLC ++ D +ISCY CG+ H G+
Sbjct: 114 KEIQCYVCKRLGHLCCVNTDDATAGEISCYKCGQLGHMGL 153
Score = 35.4 bits (80), Expect(2) = 4e-10
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 4 CGDLGHDMMSCRKGYKPEDLKKI 72
CG+ GHD+ SCR Y +DLK+I
Sbjct: 94 CGNSGHDIFSCRNDYSQDDLKEI 116
>gb|EPS59973.1| hypothetical protein M569_14831, partial [Genlisea aurea]
Length = 262
Score = 48.9 bits (115), Expect(2) = 4e-10
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +3
Query: 63 KEDQCYICKMLGHLCRIDIVDGCQRDISCYNCGEFVHSGMVSP 191
KE +CYIC GHLC ++ D R +SCY CG+ H G P
Sbjct: 162 KEIKCYICGKFGHLCCVEYTDPGPRKVSCYECGQSGHIGSDCP 204
Score = 40.8 bits (94), Expect(2) = 4e-10
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +1
Query: 4 CGDLGHDMMSCRKGYKPEDLKKI 72
CGD GHD SCR Y P+DLK+I
Sbjct: 142 CGDFGHDFFSCRNDYSPDDLKEI 164
>gb|EOY09642.1| Zinc knuckle (CCHC-type) family protein isoform 1 [Theobroma cacao]
Length = 489
Score = 47.0 bits (110), Expect(2) = 5e-10
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 63 KEDQCYICKMLGHLCRIDIVDGCQRDISCYNCGEFVHSG 179
K QCY+C GHL ++++D ++SCYNCG+ H G
Sbjct: 341 KRIQCYVCNGFGHLSCVNVLDTSPAEVSCYNCGQTGHLG 379
Score = 42.4 bits (98), Expect(2) = 5e-10
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +1
Query: 4 CGDLGHDMMSCRKGYKPEDLKKI 72
CGD GHDM SCR Y P+DLK+I
Sbjct: 321 CGDSGHDMFSCRSDYSPDDLKRI 343
>ref|XP_006340438.1| PREDICTED: uncharacterized protein LOC102593191 [Solanum tuberosum]
Length = 487
Score = 52.4 bits (124), Expect(2) = 5e-10
Identities = 22/40 (55%), Positives = 25/40 (62%)
Frame = +3
Query: 63 KEDQCYICKMLGHLCRIDIVDGCQRDISCYNCGEFVHSGM 182
KE QCYICK GHLC DG +ISCY CG H+G+
Sbjct: 269 KEIQCYICKSFGHLCCASYPDGGPSEISCYRCGLLGHTGL 308
Score = 37.0 bits (84), Expect(2) = 5e-10
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 4 CGDLGHDMMSCRKGYKPEDLKKI 72
CGD GHDM+SC Y +DLK+I
Sbjct: 249 CGDSGHDMLSCWNNYSADDLKEI 271
>gb|EOY09643.1| Uncharacterized protein isoform 2, partial [Theobroma cacao]
Length = 425
Score = 47.0 bits (110), Expect(2) = 5e-10
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 63 KEDQCYICKMLGHLCRIDIVDGCQRDISCYNCGEFVHSG 179
K QCY+C GHL ++++D ++SCYNCG+ H G
Sbjct: 341 KRIQCYVCNGFGHLSCVNVLDTSPAEVSCYNCGQTGHLG 379
Score = 42.4 bits (98), Expect(2) = 5e-10
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +1
Query: 4 CGDLGHDMMSCRKGYKPEDLKKI 72
CGD GHDM SCR Y P+DLK+I
Sbjct: 321 CGDSGHDMFSCRSDYSPDDLKRI 343
>ref|XP_006424035.1| hypothetical protein CICLE_v10028298mg [Citrus clementina]
gi|557525969|gb|ESR37275.1| hypothetical protein
CICLE_v10028298mg [Citrus clementina]
Length = 491
Score = 53.1 bits (126), Expect(2) = 1e-09
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +3
Query: 63 KEDQCYICKMLGHLCRIDIVDGCQRDISCYNCGEFVHSGM 182
KE QCYIC+ GHLC ++I D ++SC+ CG+ H+G+
Sbjct: 275 KEVQCYICRSFGHLCCVNISDAVPGEVSCFRCGQLGHTGL 314
Score = 35.0 bits (79), Expect(2) = 1e-09
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 301 KGKTKEGSARVCYICGEEGHIARGC 375
+G+T E S CY CG EGH AR C
Sbjct: 327 RGETVEASPSSCYKCGAEGHFAREC 351
>ref|XP_006424033.1| hypothetical protein CICLE_v10028298mg [Citrus clementina]
gi|557525967|gb|ESR37273.1| hypothetical protein
CICLE_v10028298mg [Citrus clementina]
Length = 484
Score = 53.1 bits (126), Expect(2) = 1e-09
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +3
Query: 63 KEDQCYICKMLGHLCRIDIVDGCQRDISCYNCGEFVHSGM 182
KE QCYIC+ GHLC ++I D ++SC+ CG+ H+G+
Sbjct: 275 KEVQCYICRSFGHLCCVNISDAVPGEVSCFRCGQLGHTGL 314
Score = 35.0 bits (79), Expect(2) = 1e-09
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 301 KGKTKEGSARVCYICGEEGHIARGC 375
+G+T E S CY CG EGH AR C
Sbjct: 320 RGETVEASPSSCYKCGAEGHFAREC 344