BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00024621
         (1103 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001772028.1| predicted protein [Physcomitrella patens] gi...   277   5e-72
ref|XP_006663930.1| PREDICTED: DNA polymerase alpha subunit B-li...   261   4e-67
ref|XP_006858888.1| hypothetical protein AMTR_s00066p00201540 [A...   259   1e-66
gb|EEE53009.1| hypothetical protein OsJ_35699 [Oryza sativa Japo...   256   1e-65
ref|NP_001066483.1| Os12g0242900 [Oryza sativa Japonica Group] g...   256   1e-65
gb|ABG21942.1| DNA polymerase alpha subunit B family protein, ex...   256   1e-65
gb|ABA97199.2| DNA polymerase alpha subunit B family protein, ex...   256   1e-65
ref|XP_002438164.1| hypothetical protein SORBIDRAFT_10g009040 [S...   256   1e-65
gb|EEC69071.1| hypothetical protein OsI_37935 [Oryza sativa Indi...   254   3e-65
gb|AFW56457.1| hypothetical protein ZEAMMB73_686460 [Zea mays]        254   6e-65
ref|NP_001130410.1| uncharacterized protein LOC100191506 [Zea ma...   254   6e-65
ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-li...   253   1e-64
gb|EMJ25471.1| hypothetical protein PRUPE_ppa018609mg [Prunus pe...   252   2e-64
ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-li...   252   2e-64
dbj|BAK05466.1| predicted protein [Hordeum vulgare subsp. vulgare]    252   2e-64
gb|EOY00828.1| DNA polymerase alpha 2 [Theobroma cacao]               251   4e-64
ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-li...   250   6e-64
ref|XP_006378282.1| DNA polymerase alpha subunit B family protei...   249   2e-63
ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V...   249   2e-63
ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-li...   248   2e-63

>ref|XP_001772028.1| predicted protein [Physcomitrella patens] gi|162676629|gb|EDQ63109.1|
            predicted protein [Physcomitrella patens]
          Length = 635

 Score =  277 bits (709), Expect = 5e-72
 Identities = 134/252 (53%), Positives = 182/252 (72%), Gaps = 7/252 (2%)
 Frame = +1

Query: 1    NILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDDMGPNARVILVPSTRDA 180
            N+LILMGPFVDS+HPQIK+GT+ KLF  +F E++  R+ DYC++MG   R++LVPS RDA
Sbjct: 388  NLLILMGPFVDSEHPQIKQGTVGKLFSHIFQEEIRMRVEDYCEEMGDGCRIVLVPSHRDA 447

Query: 181  HHDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDVLRHLSSEEISRDSG 360
            HHD +FPQP F+   F+  + QIT ++NPG+L+++E+ VG CT D+LRHLSSEE+SR   
Sbjct: 448  HHDLIFPQPPFDADEFEDPNHQITLLSNPGVLKVDEVTVGFCTTDILRHLSSEEVSRVPQ 507

Query: 361  GKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPDILILPSDLAPFA 540
            G ++DR++RLA+H+L+QRSFYPL+P    VPLDL  +PE+LD+  +PDIL+L S+LAPF 
Sbjct: 508  GASSDRMTRLASHLLSQRSFYPLFPPPQSVPLDLSVAPESLDLSSSPDILLLSSNLAPFV 567

Query: 541  KVLQLGEDLKTNEN-------KCVSINPGRLAKGASGGTFAEILIQEREQSYNQNENLTS 699
            KVL L  D++  EN       KC+ INPG  A+G SGGTF EI +     S + N  L  
Sbjct: 568  KVLSLPADIQRQENREKVEKVKCICINPGYAARGMSGGTFTEIHL----SSGDSNTELEP 623

Query: 700  LDEKTAVSIVRL 735
            L ++  V IVR+
Sbjct: 624  LHKRAQVKIVRV 635


>ref|XP_006663930.1| PREDICTED: DNA polymerase alpha subunit B-like [Oryza brachyantha]
          Length = 410

 Score =  261 bits (667), Expect = 4e-67
 Identities = 130/245 (53%), Positives = 176/245 (71%), Gaps = 1/245 (0%)
 Frame = +1

Query: 4   ILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDDMGPNARVILVPSTRDAH 183
           +LILMGPF+DS HP+IK+GT+D+ FQD+FL ++  +++D+   +G N RVILVPS RDAH
Sbjct: 180 LLILMGPFIDSDHPEIKKGTVDQSFQDIFLFEIMRKIQDFTQYLGHNVRVILVPSVRDAH 239

Query: 184 HDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDVLRHLSSEEISR-DSG 360
           HDFVFPQPAF+ +  + ++ QI+C+ANP L   NEI  G CT+D+L+HLS EEISR   G
Sbjct: 240 HDFVFPQPAFDLNLPEDITHQISCLANPSLFSCNEIQFGCCTMDILKHLSGEEISRKPPG 299

Query: 361 GKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPDILILPSDLAPFA 540
           GK  DR+ R+ AHIL Q+S+YPLYP  +GVPLD   +  AL+I  APD+L+LPSDLAPF 
Sbjct: 300 GKPGDRIGRICAHILKQQSYYPLYPPPAGVPLDFSLASGALEISSAPDVLLLPSDLAPFV 359

Query: 541 KVLQLGEDLKTNENKCVSINPGRLAKGASGGTFAEILIQEREQSYNQNENLTSLDEKTAV 720
           KVL L E  +  ++  + +NPGRLAKG  GGTF E+       +YN++       +KT+ 
Sbjct: 360 KVLSLDESSEEPKH-FICVNPGRLAKGIGGGTFVEL-------NYNED------TDKTSA 405

Query: 721 SIVRL 735
           SI+R+
Sbjct: 406 SIIRI 410


>ref|XP_006858888.1| hypothetical protein AMTR_s00066p00201540 [Amborella trichopoda]
            gi|548862999|gb|ERN20355.1| hypothetical protein
            AMTR_s00066p00201540 [Amborella trichopoda]
          Length = 628

 Score =  259 bits (662), Expect = 1e-66
 Identities = 131/246 (53%), Positives = 173/246 (70%), Gaps = 2/246 (0%)
 Frame = +1

Query: 4    ILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDDMGPNARVILVPSTRDAH 183
            +LILMGPFVD++HP+IK+GTID+ F +VF E++  +L DYC  MGP AR++LVPSTRDAH
Sbjct: 396  LLILMGPFVDTEHPKIKKGTIDESFAEVFQEEILNKLHDYCAHMGPAARIVLVPSTRDAH 455

Query: 184  HDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDVLRHLSSEEISRDSGG 363
            +DFVFPQP FE +       QITC+ANPG+L  NEI +G CT DVL+ LS EE+SR S  
Sbjct: 456  NDFVFPQPPFEIYPSTDPDQQITCLANPGVLISNEITIGCCTADVLKQLSGEEVSRMSTD 515

Query: 364  KTN-DRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPDILILPSDLAPFA 540
              + DR+ RL +H++ QR FYP+YP + G+PLD   +PEAL +   PD+L++PSDLAPF 
Sbjct: 516  ALSIDRIGRLVSHVIKQRCFYPVYPPSVGLPLDFSIAPEALHMASIPDLLLMPSDLAPFI 575

Query: 541  KVLQLGEDLKTNE-NKCVSINPGRLAKGASGGTFAEILIQEREQSYNQNENLTSLDEKTA 717
            K L  GE   T + ++C+ INPGRLAKG SGGTF E+       SY  N       ++T+
Sbjct: 576  KALPFGEGSDTEKYSRCLCINPGRLAKGVSGGTFVEL-------SYLNN------PDQTS 622

Query: 718  VSIVRL 735
             SI+R+
Sbjct: 623  ASIIRI 628


>gb|EEE53009.1| hypothetical protein OsJ_35699 [Oryza sativa Japonica Group]
          Length = 625

 Score =  256 bits (654), Expect = 1e-65
 Identities = 128/245 (52%), Positives = 171/245 (69%), Gaps = 1/245 (0%)
 Frame = +1

Query: 4    ILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDDMGPNARVILVPSTRDAH 183
            +LILMGPF+DS HP+IK+G +DK FQD+FL ++  +L+D+   +G N RVIL+PS RDAH
Sbjct: 395  LLILMGPFIDSDHPEIKKGAVDKSFQDIFLFEILRKLQDFTQYLGHNVRVILIPSVRDAH 454

Query: 184  HDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDVLRHLSSEEISR-DSG 360
            HDFVFPQPAF+ +  + ++ QITC+ANP L   NEI  G CT+D+L+HLS EEISR   G
Sbjct: 455  HDFVFPQPAFDLNLPEDITHQITCLANPSLFSCNEIHFGCCTMDILKHLSGEEISRKPPG 514

Query: 361  GKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPDILILPSDLAPFA 540
             K  DR+ R+  HIL Q+S+YPLYP  +GVPLD   +  AL+I  APD+L+LPSDLAPF 
Sbjct: 515  EKHGDRIGRICTHILKQQSYYPLYPPPAGVPLDFSLANGALEIASAPDVLLLPSDLAPFV 574

Query: 541  KVLQLGEDLKTNENKCVSINPGRLAKGASGGTFAEILIQEREQSYNQNENLTSLDEKTAV 720
            KVL L E       + + +NPGRLAKG  GGTF E+       +YN++       +KT+ 
Sbjct: 575  KVLSLDES-SEEPKRFICMNPGRLAKGIGGGTFVEL-------NYNED------TDKTSA 620

Query: 721  SIVRL 735
            S++R+
Sbjct: 621  SLIRI 625


>ref|NP_001066483.1| Os12g0242900 [Oryza sativa Japonica Group]
           gi|113648990|dbj|BAF29502.1| Os12g0242900, partial
           [Oryza sativa Japonica Group]
          Length = 400

 Score =  256 bits (654), Expect = 1e-65
 Identities = 128/245 (52%), Positives = 171/245 (69%), Gaps = 1/245 (0%)
 Frame = +1

Query: 4   ILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDDMGPNARVILVPSTRDAH 183
           +LILMGPF+DS HP+IK+G +DK FQD+FL ++  +L+D+   +G N RVIL+PS RDAH
Sbjct: 170 LLILMGPFIDSDHPEIKKGAVDKSFQDIFLFEILRKLQDFTQYLGHNVRVILIPSVRDAH 229

Query: 184 HDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDVLRHLSSEEISR-DSG 360
           HDFVFPQPAF+ +  + ++ QITC+ANP L   NEI  G CT+D+L+HLS EEISR   G
Sbjct: 230 HDFVFPQPAFDLNLPEDITHQITCLANPSLFSCNEIHFGCCTMDILKHLSGEEISRKPPG 289

Query: 361 GKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPDILILPSDLAPFA 540
            K  DR+ R+  HIL Q+S+YPLYP  +GVPLD   +  AL+I  APD+L+LPSDLAPF 
Sbjct: 290 EKHGDRIGRICTHILKQQSYYPLYPPPAGVPLDFSLANGALEIASAPDVLLLPSDLAPFV 349

Query: 541 KVLQLGEDLKTNENKCVSINPGRLAKGASGGTFAEILIQEREQSYNQNENLTSLDEKTAV 720
           KVL L E       + + +NPGRLAKG  GGTF E+       +YN++       +KT+ 
Sbjct: 350 KVLSLDES-SEEPKRFICMNPGRLAKGIGGGTFVEL-------NYNED------TDKTSA 395

Query: 721 SIVRL 735
           S++R+
Sbjct: 396 SLIRI 400


>gb|ABG21942.1| DNA polymerase alpha subunit B family protein, expressed [Oryza
           sativa Japonica Group]
          Length = 339

 Score =  256 bits (654), Expect = 1e-65
 Identities = 128/245 (52%), Positives = 171/245 (69%), Gaps = 1/245 (0%)
 Frame = +1

Query: 4   ILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDDMGPNARVILVPSTRDAH 183
           +LILMGPF+DS HP+IK+G +DK FQD+FL ++  +L+D+   +G N RVIL+PS RDAH
Sbjct: 109 LLILMGPFIDSDHPEIKKGAVDKSFQDIFLFEILRKLQDFTQYLGHNVRVILIPSVRDAH 168

Query: 184 HDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDVLRHLSSEEISR-DSG 360
           HDFVFPQPAF+ +  + ++ QITC+ANP L   NEI  G CT+D+L+HLS EEISR   G
Sbjct: 169 HDFVFPQPAFDLNLPEDITHQITCLANPSLFSCNEIHFGCCTMDILKHLSGEEISRKPPG 228

Query: 361 GKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPDILILPSDLAPFA 540
            K  DR+ R+  HIL Q+S+YPLYP  +GVPLD   +  AL+I  APD+L+LPSDLAPF 
Sbjct: 229 EKHGDRIGRICTHILKQQSYYPLYPPPAGVPLDFSLANGALEIASAPDVLLLPSDLAPFV 288

Query: 541 KVLQLGEDLKTNENKCVSINPGRLAKGASGGTFAEILIQEREQSYNQNENLTSLDEKTAV 720
           KVL L E       + + +NPGRLAKG  GGTF E+       +YN++       +KT+ 
Sbjct: 289 KVLSLDES-SEEPKRFICMNPGRLAKGIGGGTFVEL-------NYNED------TDKTSA 334

Query: 721 SIVRL 735
           S++R+
Sbjct: 335 SLIRI 339


>gb|ABA97199.2| DNA polymerase alpha subunit B family protein, expressed [Oryza
           sativa Japonica Group] gi|215693905|dbj|BAG89104.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 368

 Score =  256 bits (654), Expect = 1e-65
 Identities = 128/245 (52%), Positives = 171/245 (69%), Gaps = 1/245 (0%)
 Frame = +1

Query: 4   ILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDDMGPNARVILVPSTRDAH 183
           +LILMGPF+DS HP+IK+G +DK FQD+FL ++  +L+D+   +G N RVIL+PS RDAH
Sbjct: 138 LLILMGPFIDSDHPEIKKGAVDKSFQDIFLFEILRKLQDFTQYLGHNVRVILIPSVRDAH 197

Query: 184 HDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDVLRHLSSEEISR-DSG 360
           HDFVFPQPAF+ +  + ++ QITC+ANP L   NEI  G CT+D+L+HLS EEISR   G
Sbjct: 198 HDFVFPQPAFDLNLPEDITHQITCLANPSLFSCNEIHFGCCTMDILKHLSGEEISRKPPG 257

Query: 361 GKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPDILILPSDLAPFA 540
            K  DR+ R+  HIL Q+S+YPLYP  +GVPLD   +  AL+I  APD+L+LPSDLAPF 
Sbjct: 258 EKHGDRIGRICTHILKQQSYYPLYPPPAGVPLDFSLANGALEIASAPDVLLLPSDLAPFV 317

Query: 541 KVLQLGEDLKTNENKCVSINPGRLAKGASGGTFAEILIQEREQSYNQNENLTSLDEKTAV 720
           KVL L E       + + +NPGRLAKG  GGTF E+       +YN++       +KT+ 
Sbjct: 318 KVLSLDES-SEEPKRFICMNPGRLAKGIGGGTFVEL-------NYNED------TDKTSA 363

Query: 721 SIVRL 735
           S++R+
Sbjct: 364 SLIRI 368


>ref|XP_002438164.1| hypothetical protein SORBIDRAFT_10g009040 [Sorghum bicolor]
            gi|241916387|gb|EER89531.1| hypothetical protein
            SORBIDRAFT_10g009040 [Sorghum bicolor]
          Length = 626

 Score =  256 bits (653), Expect = 1e-65
 Identities = 129/245 (52%), Positives = 173/245 (70%), Gaps = 1/245 (0%)
 Frame = +1

Query: 4    ILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDDMGPNARVILVPSTRDAH 183
            +LILMGPF+DS HP IK+GT+D+ F D+F  ++  +++D+   +G   RVIL+PS RDAH
Sbjct: 396  LLILMGPFIDSDHPDIKKGTVDQSFHDIFHFEILRKIQDFTQYLGNTVRVILIPSVRDAH 455

Query: 184  HDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDVLRHLSSEEISRDSG- 360
            HDFVFPQPAF+ ++ + ++ QITC+ANP L   NEI  G CT+D+L+ LS EEISR    
Sbjct: 456  HDFVFPQPAFDLNFPEDITHQITCLANPCLFSSNEIHFGCCTVDILKQLSGEEISRKPPV 515

Query: 361  GKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPDILILPSDLAPFA 540
            GK  DR+ RLA+HIL Q+S+YPLYP+A+GVPLD   + EAL+I  APD+L+LPSDLAPF 
Sbjct: 516  GKPADRIGRLASHILKQQSYYPLYPSAAGVPLDFSLAKEALEISSAPDVLLLPSDLAPFV 575

Query: 541  KVLQLGEDLKTNENKCVSINPGRLAKGASGGTFAEILIQEREQSYNQNENLTSLDEKTAV 720
            KVL LGE    ++ + + +NPGRLAKG  GGTF E+        YN+        +KT  
Sbjct: 576  KVLSLGEG-SDDQKRFICVNPGRLAKGIGGGTFVELY-------YNEG------IDKTNA 621

Query: 721  SIVRL 735
            SI+R+
Sbjct: 622  SIIRI 626


>gb|EEC69071.1| hypothetical protein OsI_37935 [Oryza sativa Indica Group]
          Length = 625

 Score =  254 bits (650), Expect = 3e-65
 Identities = 127/245 (51%), Positives = 171/245 (69%), Gaps = 1/245 (0%)
 Frame = +1

Query: 4    ILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDDMGPNARVILVPSTRDAH 183
            +LILMGPF+DS HP+IK+G +D+ FQD+FL ++  +L+D+   +G N RVIL+PS RDAH
Sbjct: 395  LLILMGPFIDSDHPEIKKGAVDQSFQDIFLFEILRKLQDFTQYLGHNVRVILIPSVRDAH 454

Query: 184  HDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDVLRHLSSEEISR-DSG 360
            HDFVFPQPAF+ +  + ++ QITC+ANP L   NEI  G CT+D+L+HLS EEISR   G
Sbjct: 455  HDFVFPQPAFDLNLPEDITHQITCLANPSLFSCNEIHFGCCTMDILKHLSGEEISRKPPG 514

Query: 361  GKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPDILILPSDLAPFA 540
             K  DR+ R+  HIL Q+S+YPLYP  +GVPLD   +  AL+I  APD+L+LPSDLAPF 
Sbjct: 515  EKHGDRIGRICTHILKQQSYYPLYPPPAGVPLDFSLANGALEIASAPDVLLLPSDLAPFV 574

Query: 541  KVLQLGEDLKTNENKCVSINPGRLAKGASGGTFAEILIQEREQSYNQNENLTSLDEKTAV 720
            KVL L E       + + +NPGRLAKG  GGTF E+       +YN++       +KT+ 
Sbjct: 575  KVLSLDES-SEEPKRFICMNPGRLAKGIGGGTFVEL-------NYNED------TDKTSA 620

Query: 721  SIVRL 735
            S++R+
Sbjct: 621  SLIRI 625


>gb|AFW56457.1| hypothetical protein ZEAMMB73_686460 [Zea mays]
          Length = 551

 Score =  254 bits (648), Expect = 6e-65
 Identities = 131/245 (53%), Positives = 170/245 (69%), Gaps = 1/245 (0%)
 Frame = +1

Query: 4    ILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDDMGPNARVILVPSTRDAH 183
            +LILMGPF+DS HP IK+GTID+ F D+F  +V  +++D+   +G   RVIL+PS RDAH
Sbjct: 321  LLILMGPFIDSDHPDIKKGTIDQSFHDIFHFEVLRKIQDFTQYLGNTVRVILIPSVRDAH 380

Query: 184  HDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDVLRHLSSEEISR-DSG 360
            HDFVFPQPAF+ +  +  + QIT +ANP L   NEI  G CT+D+L+ LS +EISR   G
Sbjct: 381  HDFVFPQPAFDLNLLEDTTHQITSLANPCLFGSNEINFGCCTVDILKQLSGQEISRKPPG 440

Query: 361  GKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPDILILPSDLAPFA 540
            GK  DR+ RLA+HIL Q+S+YPLYP A GVPLDL  + EAL+I  APD+L+LPSDLAPF 
Sbjct: 441  GKPGDRIGRLASHILKQQSYYPLYPPAPGVPLDLSLAKEALEIPSAPDVLLLPSDLAPFV 500

Query: 541  KVLQLGEDLKTNENKCVSINPGRLAKGASGGTFAEILIQEREQSYNQNENLTSLDEKTAV 720
            KVL LGE    ++ + + +NPGRLAKG  GGTF E+        YN+        +KT  
Sbjct: 501  KVLSLGEG-SDDDRRFICVNPGRLAKGIGGGTFVELY-------YNEG------IDKTNA 546

Query: 721  SIVRL 735
            SI+R+
Sbjct: 547  SIIRI 551


>ref|NP_001130410.1| uncharacterized protein LOC100191506 [Zea mays]
            gi|194689050|gb|ACF78609.1| unknown [Zea mays]
            gi|413916526|gb|AFW56458.1| hypothetical protein
            ZEAMMB73_686460 [Zea mays]
          Length = 626

 Score =  254 bits (648), Expect = 6e-65
 Identities = 131/245 (53%), Positives = 170/245 (69%), Gaps = 1/245 (0%)
 Frame = +1

Query: 4    ILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDDMGPNARVILVPSTRDAH 183
            +LILMGPF+DS HP IK+GTID+ F D+F  +V  +++D+   +G   RVIL+PS RDAH
Sbjct: 396  LLILMGPFIDSDHPDIKKGTIDQSFHDIFHFEVLRKIQDFTQYLGNTVRVILIPSVRDAH 455

Query: 184  HDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDVLRHLSSEEISR-DSG 360
            HDFVFPQPAF+ +  +  + QIT +ANP L   NEI  G CT+D+L+ LS +EISR   G
Sbjct: 456  HDFVFPQPAFDLNLLEDTTHQITSLANPCLFGSNEINFGCCTVDILKQLSGQEISRKPPG 515

Query: 361  GKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPDILILPSDLAPFA 540
            GK  DR+ RLA+HIL Q+S+YPLYP A GVPLDL  + EAL+I  APD+L+LPSDLAPF 
Sbjct: 516  GKPGDRIGRLASHILKQQSYYPLYPPAPGVPLDLSLAKEALEIPSAPDVLLLPSDLAPFV 575

Query: 541  KVLQLGEDLKTNENKCVSINPGRLAKGASGGTFAEILIQEREQSYNQNENLTSLDEKTAV 720
            KVL LGE    ++ + + +NPGRLAKG  GGTF E+        YN+        +KT  
Sbjct: 576  KVLSLGEG-SDDDRRFICVNPGRLAKGIGGGTFVELY-------YNEG------IDKTNA 621

Query: 721  SIVRL 735
            SI+R+
Sbjct: 622  SIIRI 626


>ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum tuberosum]
          Length = 617

 Score =  253 bits (645), Expect = 1e-64
 Identities = 120/215 (55%), Positives = 158/215 (73%)
 Frame = +1

Query: 4    ILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDDMGPNARVILVPSTRDAH 183
            ++IL+GPF+DS HP+IK+GT+D+ F ++F +++  RLRDY + MG  ARVILVPS RDA 
Sbjct: 388  LIILLGPFIDSDHPEIKKGTVDRTFDEIFQDEILARLRDYVEYMGSAARVILVPSVRDAS 447

Query: 184  HDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDVLRHLSSEEISRDSGG 363
            HDFV+PQPAF+    D +  QI  + NPG+   NE+ V  CT+DVL+ LS+EEISR+  G
Sbjct: 448  HDFVYPQPAFDIQSPD-LEHQINSITNPGIFCANEVKVACCTVDVLKQLSAEEISRNPQG 506

Query: 364  KTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPDILILPSDLAPFAK 543
             +  R++ LA HILNQRSFYPLYP A GVP+D   +PEAL +  APDILILPSDLA F +
Sbjct: 507  GSKQRMTTLANHILNQRSFYPLYPPAEGVPIDFSLAPEALQMSTAPDILILPSDLAHFVR 566

Query: 544  VLQLGEDLKTNENKCVSINPGRLAKGASGGTFAEI 648
            V+ LGE  +  E KC+ +NPGRL++G  GG F E+
Sbjct: 567  VISLGERSEGEEVKCICVNPGRLSRGEGGGFFMEL 601


>gb|EMJ25471.1| hypothetical protein PRUPE_ppa018609mg [Prunus persica]
          Length = 612

 Score =  252 bits (644), Expect = 2e-64
 Identities = 119/216 (55%), Positives = 165/216 (76%), Gaps = 1/216 (0%)
 Frame = +1

Query: 4    ILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDDMGPNARVILVPSTRDAH 183
            +LIL+GPF+DS+HP+IK+GT+D+ F ++F  ++  RL+D+ + MG +AR++LVPS RDA+
Sbjct: 384  LLILLGPFIDSEHPEIKKGTVDRSFDEIFRSEILRRLQDHVEYMGSHARIVLVPSIRDAN 443

Query: 184  HDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDVLRHLSSEEISRD-SG 360
            HDFVFPQPAF+ H  + +  QIT + NPG+   N++ +G C++D+L+HLS EEISR+   
Sbjct: 444  HDFVFPQPAFDIHPAN-LRHQITSLTNPGIFEGNQVKIGCCSVDILKHLSGEEISRNPKD 502

Query: 361  GKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPDILILPSDLAPFA 540
            GK +DR+SRLA HI++QRSFYPLYP A G+PLD   +PEAL+I + PDILILPSD+  F 
Sbjct: 503  GKLSDRMSRLANHIISQRSFYPLYPPAEGIPLDFSLAPEALNISLIPDILILPSDMKHFV 562

Query: 541  KVLQLGEDLKTNENKCVSINPGRLAKGASGGTFAEI 648
            KV   GE+    + KC+ +NPGRLAKG  GGTF E+
Sbjct: 563  KVKWSGEE--KEQVKCICVNPGRLAKGEGGGTFVEL 596


>ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-like [Fragaria vesca subsp.
            vesca]
          Length = 620

 Score =  252 bits (643), Expect = 2e-64
 Identities = 123/216 (56%), Positives = 159/216 (73%), Gaps = 1/216 (0%)
 Frame = +1

Query: 4    ILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDDMGPNARVILVPSTRDAH 183
            +LIL+GPF+DS+HP+IK+G +D+ F D+F  ++  RL+DY + MG +ARV+LVPS RDA+
Sbjct: 392  LLILLGPFIDSEHPEIKKGNVDRTFDDIFQFEILRRLQDYAEYMGSHARVVLVPSVRDAN 451

Query: 184  HDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDVLRHLSSEEISR-DSG 360
            HDFVFPQP F+ H  D +  QIT + NPG+L  N++ +G C++D+L+HLS EE SR    
Sbjct: 452  HDFVFPQPPFDIHPPD-LKHQITSLTNPGMLEANQVKIGCCSVDILKHLSGEETSRFPKD 510

Query: 361  GKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPDILILPSDLAPFA 540
            G + DR+SRLA HIL QRSFYPLYP A  VPLD   +PEAL+I + PDILILPSDL  F 
Sbjct: 511  GTSRDRMSRLANHILGQRSFYPLYPPAESVPLDFSLAPEALNISLIPDILILPSDLKYFV 570

Query: 541  KVLQLGEDLKTNENKCVSINPGRLAKGASGGTFAEI 648
            KVL LGE       KC+ +NPGRL+KG  GGTF E+
Sbjct: 571  KVLSLGEG--EPPVKCICVNPGRLSKGEGGGTFVEL 604


>dbj|BAK05466.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 625

 Score =  252 bits (643), Expect = 2e-64
 Identities = 121/220 (55%), Positives = 160/220 (72%), Gaps = 1/220 (0%)
 Frame = +1

Query: 4    ILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDDMGPNARVILVPSTRDAH 183
            +LILMGPF+DS HP+IK+GT D+ F D+F  ++  +L+D+   +G N RVILVPS RDAH
Sbjct: 395  LLILMGPFIDSDHPEIKKGTSDQSFHDIFRFEILRKLQDFTQYLGYNVRVILVPSVRDAH 454

Query: 184  HDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDVLRHLSSEEISR-DSG 360
            HD VFPQPAF+ H  + ++ QITC++NP L   NEI  G CT+D+L+ LS +EISR   G
Sbjct: 455  HDTVFPQPAFDLHLPEDITQQITCLSNPSLFSSNEIQFGCCTVDILKQLSGDEISRKPPG 514

Query: 361  GKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPDILILPSDLAPFA 540
            GK  DR+ RLA HI+ Q+S+YPLYP A+GVP+D   + EAL+I  APD+L+LPSDLAP  
Sbjct: 515  GKAADRIGRLATHIVKQQSYYPLYPPAAGVPMDFSLAKEALEIPSAPDVLLLPSDLAPSV 574

Query: 541  KVLQLGEDLKTNENKCVSINPGRLAKGASGGTFAEILIQE 660
            KVL + ED +  + + + +NPGRLAKG  GGTF E+   E
Sbjct: 575  KVLSVNEDTE-EQKRFICVNPGRLAKGIGGGTFVELYYNE 613


>gb|EOY00828.1| DNA polymerase alpha 2 [Theobroma cacao]
          Length = 621

 Score =  251 bits (641), Expect = 4e-64
 Identities = 128/228 (56%), Positives = 161/228 (70%), Gaps = 3/228 (1%)
 Frame = +1

Query: 4    ILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDDMGPNARVILVPSTRDAH 183
            +LIL+GPF+DS+HPQIK+GT D  F ++F  +V   ++DY + MG +ARVIL+PS RDA+
Sbjct: 390  LLILLGPFIDSEHPQIKKGTFDLSFDEIFRSEVLRMVQDYVEYMGSDARVILIPSIRDAN 449

Query: 184  HDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDVLRHLSSEEISRDS-G 360
            HDFVFPQP F+    +    QIT + NPG+   +E+ +G CT+D+L+HLS EEISR S  
Sbjct: 450  HDFVFPQPPFDLDLHN--LNQITSLTNPGIFEADEVKIGCCTVDILKHLSGEEISRHSMD 507

Query: 361  GKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPDILILPSDLAPFA 540
            G  +DRLSRLA+HIL+QRSFYPLYP A GVPLD   +PEAL I   PD+LILPSD+  F 
Sbjct: 508  GTPSDRLSRLASHILSQRSFYPLYPPAEGVPLDSSLAPEALHIPSVPDLLILPSDIKYFV 567

Query: 541  KVLQLG--EDLKTNENKCVSINPGRLAKGASGGTFAEILIQEREQSYN 678
            KVL LG   + K    KC+ INPGRLAKGA GGTF E+  Q      N
Sbjct: 568  KVLSLGGTSEGKEQTKKCICINPGRLAKGAGGGTFVELKYQGSPDKMN 615


>ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum lycopersicum]
          Length = 617

 Score =  250 bits (639), Expect = 6e-64
 Identities = 118/215 (54%), Positives = 157/215 (73%)
 Frame = +1

Query: 4    ILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDDMGPNARVILVPSTRDAH 183
            ++IL+GPF+DS HP+IK+GT+D+ F ++F +++  RLRDY + MG  ARV+LVPS RDA 
Sbjct: 388  LIILLGPFIDSDHPEIKKGTVDRTFDEIFQDEILARLRDYVEYMGSAARVVLVPSVRDAS 447

Query: 184  HDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDVLRHLSSEEISRDSGG 363
            HDFV+PQPAF+    D +  QI  + NPG+   NE+ V  CT+DVL+ LS+EEISR+  G
Sbjct: 448  HDFVYPQPAFDIQLPD-LEHQINSITNPGIFCANEVKVACCTVDVLKQLSAEEISRNPQG 506

Query: 364  KTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPDILILPSDLAPFAK 543
             +  R++ LA HILNQRSFYPLYP A GVP+D   +PEAL +   PDILILPSDLA F +
Sbjct: 507  GSKQRMTTLANHILNQRSFYPLYPPAEGVPIDFSLAPEALQMSTDPDILILPSDLAHFVR 566

Query: 544  VLQLGEDLKTNENKCVSINPGRLAKGASGGTFAEI 648
            V+ LGE  +  E KC+ +NPGRL++G  GG F E+
Sbjct: 567  VVSLGERSEGEEVKCICVNPGRLSRGEGGGFFVEL 601


>ref|XP_006378282.1| DNA polymerase alpha subunit B family protein [Populus trichocarpa]
            gi|550329229|gb|ERP56079.1| DNA polymerase alpha subunit
            B family protein [Populus trichocarpa]
          Length = 618

 Score =  249 bits (635), Expect = 2e-63
 Identities = 122/226 (53%), Positives = 161/226 (71%), Gaps = 1/226 (0%)
 Frame = +1

Query: 4    ILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDDMGPNARVILVPSTRDAH 183
            +L+LMGPF+DS+HP++K+G +D+ F ++F +++  RL+D+ +  G N RVILVPS RDA 
Sbjct: 390  LLVLMGPFIDSEHPEVKKGAVDRSFDELFCQEILRRLQDHVEYAGSNVRVILVPSIRDAQ 449

Query: 184  HDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDVLRHLSSEEISRD-SG 360
            HDFVFPQPAF+ H    +  QIT + NPG+   N++ VG CT+D+L+ +S EE+SR+ + 
Sbjct: 450  HDFVFPQPAFDIH-LPNLEHQITGLTNPGIFEANQVKVGCCTVDILKQISGEEMSRNPTD 508

Query: 361  GKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPDILILPSDLAPFA 540
            G  +DR+SRLA HI++QRSFYPLYP A  VPLD   +PEAL I   PDILILPSD+  F 
Sbjct: 509  GTPSDRMSRLANHIISQRSFYPLYPPAEDVPLDFSLAPEALHINSIPDILILPSDMKYFM 568

Query: 541  KVLQLGEDLKTNENKCVSINPGRLAKGASGGTFAEILIQEREQSYN 678
            KVL LGE     + KC+ INPGRLAKG  GGTFAE+  Q      N
Sbjct: 569  KVLTLGEG--EEQRKCICINPGRLAKGEGGGTFAELNYQGSPDKMN 612


>ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
            gi|297738371|emb|CBI27572.3| unnamed protein product
            [Vitis vinifera]
          Length = 623

 Score =  249 bits (635), Expect = 2e-63
 Identities = 127/246 (51%), Positives = 170/246 (69%), Gaps = 2/246 (0%)
 Frame = +1

Query: 4    ILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDDMGPNARVILVPSTRDAH 183
            +LIL+GPFVDS+HP+I++GT+D+ F ++F  ++  RL+DY + MG  ARVILVPS RDA+
Sbjct: 392  LLILLGPFVDSEHPEIRKGTVDRSFDEIFHLEILRRLQDYVEYMGSAARVILVPSIRDAN 451

Query: 184  HDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDVLRHLSSEEISRD-SG 360
            HDFVFPQPAF  H  D +  QIT + NPG+   NE+ VG CT+DV++ LS E ISR+ + 
Sbjct: 452  HDFVFPQPAFSIHPPD-LKHQITSLTNPGMFDANEVKVGCCTVDVIKQLSGEMISRNPTD 510

Query: 361  GKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPDILILPSDLAPFA 540
            G + DR++ +A HIL+QRSFYPLYP A G+PLD   +PEAL++   PD+LILPSDLA F 
Sbjct: 511  GSSRDRMTTIANHILSQRSFYPLYPLAEGIPLDFSLAPEALEVSTIPDVLILPSDLASFV 570

Query: 541  KVLQLGEDLKTNE-NKCVSINPGRLAKGASGGTFAEILIQEREQSYNQNENLTSLDEKTA 717
            KVL LG   +  E  KC+ +NPGRLAKG  GG F E+             N     +KT+
Sbjct: 571  KVLSLGGRNEGEELVKCICVNPGRLAKGEGGGHFVEL-------------NYQGSPDKTS 617

Query: 718  VSIVRL 735
             S++R+
Sbjct: 618  ASVIRI 623


>ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-like [Cucumis sativus]
            gi|449486914|ref|XP_004157440.1| PREDICTED: DNA
            polymerase alpha subunit B-like [Cucumis sativus]
          Length = 622

 Score =  248 bits (634), Expect = 2e-63
 Identities = 124/217 (57%), Positives = 159/217 (73%), Gaps = 2/217 (0%)
 Frame = +1

Query: 4    ILILMGPFVDSQHPQIKEGTIDKLFQDVFLEQVCTRLRDYCDDMGPNARVILVPSTRDAH 183
            +LIL+GPFVDS+H  IK GT++  F+++F  +V  R++DY + MGP+ARV+L+PSTRDA+
Sbjct: 392  LLILLGPFVDSEHSDIKRGTVEMSFEEIFKFEVLRRVQDYAEHMGPDARVLLMPSTRDAN 451

Query: 184  HDFVFPQPAFEHHYFDGMSPQITCVANPGLLRINEIMVGVCTIDVLRHLSSEEISRD-SG 360
            HDF FPQPAF+      +  QI+   NP +L  N+  +  CT+D+LRHLS EE+SR+ + 
Sbjct: 452  HDFAFPQPAFD--IPSDLKLQISSPPNPCILEANQAKIACCTMDILRHLSGEELSRNLTK 509

Query: 361  GKTNDRLSRLAAHILNQRSFYPLYPAASGVPLDLCASPEALDILVAPDILILPSDLAPFA 540
            G TNDRLS LA+HIL QRSFYPLYP A GVPLD   +P+ALDI V PDILILPSD+  F 
Sbjct: 510  GGTNDRLSTLASHILRQRSFYPLYPPAEGVPLDFSLAPQALDISVIPDILILPSDMKHFV 569

Query: 541  KVLQLGEDLKTNEN-KCVSINPGRLAKGASGGTFAEI 648
            KV+ LGE     E  +CV +NPGRLAKG  GGTF E+
Sbjct: 570  KVISLGEGGSEEEQARCVCVNPGRLAKGEGGGTFVEL 606