BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00024587
         (892 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006347069.1| PREDICTED: RNA polymerase II C-terminal doma...    66   2e-08
dbj|BAD94401.1| putative protein [Arabidopsis thaliana]                65   3e-08
ref|NP_193898.3| RNA polymerase II C-terminal domain phosphatase...    65   4e-08
emb|CAB36811.1| putative protein [Arabidopsis thaliana] gi|72689...    65   4e-08
ref|XP_006413749.1| hypothetical protein EUTSA_v10024324mg [Eutr...    64   6e-08
ref|XP_006413748.1| hypothetical protein EUTSA_v10024324mg [Eutr...    64   6e-08
gb|EOY28304.1| C-terminal domain phosphatase-like 1 isoform 3 [T...    64   1e-07
gb|EOY28303.1| C-terminal domain phosphatase-like 1 isoform 2 [T...    64   1e-07
gb|EOY28302.1| C-terminal domain phosphatase-like 1 isoform 1 [T...    64   1e-07
gb|ESW31299.1| hypothetical protein PHAVU_002G226900g [Phaseolus...    63   2e-07
gb|EXB82798.1| RNA polymerase II C-terminal domain phosphatase-l...    62   2e-07
ref|XP_006377325.1| hypothetical protein POPTR_0011s04910g [Popu...    62   2e-07
ref|XP_006827806.1| hypothetical protein AMTR_s00009p00267690 [A...    62   2e-07
ref|XP_006597421.1| PREDICTED: RNA polymerase II C-terminal doma...    62   3e-07
ref|XP_006597420.1| PREDICTED: RNA polymerase II C-terminal doma...    62   3e-07
ref|XP_004505032.1| PREDICTED: RNA polymerase II C-terminal doma...    62   3e-07
ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal doma...    62   3e-07
dbj|BAF01152.1| hypothetical protein [Arabidopsis thaliana]            62   3e-07
ref|XP_006583810.1| PREDICTED: RNA polymerase II C-terminal doma...    60   1e-06
ref|XP_003529311.2| PREDICTED: RNA polymerase II C-terminal doma...    60   1e-06

>ref|XP_006347069.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Solanum tuberosum]
          Length = 953

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 73/291 (25%), Positives = 122/291 (41%), Gaps = 25/291 (8%)
 Frame = +2

Query: 2    KDFDEDFSKSMSQAAYEMKFSDLPSALDTSNYKKSEDNVAAPKPLLDR--------NALE 157
            KDFDE   + +S+ AYE     +PSA D SNY  SED+ +A     D         + +E
Sbjct: 394  KDFDEGLLQRISEVAYEDDIKQVPSAPDVSNYLISEDDPSAVNGNKDSLGFDGMADSEVE 453

Query: 158  KEEKRTSVSNKQVPLPADSLNNESKYPNKSQIVSSSQDINVMERNVESSSGREVHEYQAP 337
            +  K   +++  VP    +L+     P     +       + + +++S       ++   
Sbjct: 454  RRLKEAMLASTSVPSQMTNLD-----PRLVPALQYPVPPVISQPSIQSPVVPFPTQHLPQ 508

Query: 338  KSSMIDSERRNII--ECNIEDASQNAVGEIPGSELDINMKRRLLILKHGKVDKGHTSANQ 511
             +S++ S    I   + +++ +     GE+P SELD + +RRLLIL+HG+  +   S+  
Sbjct: 509  VTSVLKSSVTQISPQDTSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDQVSSEP 568

Query: 512  TSSFVSSEQSYVKSNCLSFG---IREDRS--QYPRMTPLQEMQCDSEYMGREKVDNRPP- 673
                 +  Q  V       G     E+ S  Q  R  P +E   + E M   K  +RPP 
Sbjct: 569  KFPMGTPLQVSVPPRVQPHGWFPAEEEMSPRQLNRPLPPKEFPLNPESMHINK--HRPPH 626

Query: 674  ----PSMDLSNSQ-----FGRGPPQEVLCMNGNQRMNQKSNKFTCPSDNYP 799
                P M+ S          +  P+EV+  +   R +Q    F  P +  P
Sbjct: 627  PPFLPKMETSMPSDRVLFENQRLPKEVIPRDDRMRFSQSQPSFRPPGEEVP 677


>dbj|BAD94401.1| putative protein [Arabidopsis thaliana]
          Length = 614

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 27/279 (9%)
 Frame = +2

Query: 2   KDFDEDFSKSMSQAAYEMKFSDLPSALDTSNYKKSEDNVAA----PKPLLDRNALEKEEK 169
           +DFD+     +++ +YE    D+PS  D S+Y  SED+ +       PL      + E +
Sbjct: 58  RDFDDSLLPRIAEISYENDAEDIPSPPDVSHYLVSEDDTSGLNGNKDPLSFDGMADTEVE 117

Query: 170 RT---SVSNKQVPLPADSLNNESKYPNKSQIVSSSQ-----DINVMERNVESSS-GREVH 322
           R    ++S     LPA +++     P +  + S+S       + V+++ ++ S+      
Sbjct: 118 RRLKEAISASSAVLPAANIDPRIAAPVQFPMASASSVSVPVPVQVVQQAIQPSAMAFPSI 177

Query: 323 EYQAPKSSMIDSERRNIIECNIEDASQNAVGEIPGSELDINMKRRLLILKHGKVDKGHTS 502
            +Q P+     ++     E +++ +     GE+P SELD + +RRLLIL+HG+  +    
Sbjct: 178 PFQQPQQPTSIAKHLVPSEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTR--DP 235

Query: 503 ANQTSSF-----VSSEQSYVKSNCLSFGIREDRSQYP-RMTPLQEMQCDSEYMGREKVDN 664
           A    SF     V +  S+V+S    F + E+      R    +E   DSE +  EK   
Sbjct: 236 APSEPSFPQRPPVQAPPSHVQSRNGWFPVEEEMDPAQIRRAVSKEYPLDSEMIHMEKHRP 295

Query: 665 RPPPSMD-LSNS-------QFGRGPPQEVLCMNGNQRMN 757
           R P     + NS          R PP+E L  +   R N
Sbjct: 296 RHPSFFSKIDNSTQSDRMLHVNRRPPKESLRRDEQLRSN 334


>ref|NP_193898.3| RNA polymerase II C-terminal domain phosphatase-like 1 [Arabidopsis
            thaliana] gi|75111335|sp|Q5YDB6.1|CPL1_ARATH RecName:
            Full=RNA polymerase II C-terminal domain phosphatase-like
            1; Short=FCP-like 1; AltName: Full=Carboxyl-terminal
            phosphatase-like 1; Short=AtCPL1; Short=CTD
            phosphatase-like 1; AltName: Full=Protein FIERY 2;
            AltName: Full=Protein JASMONATE OVEREXPRESSING 1
            gi|49175305|gb|AAT52022.1| C-terminal domain
            phosphatase-like 1 [Arabidopsis thaliana]
            gi|332659088|gb|AEE84488.1| RNA polymerase II C-terminal
            domain phosphatase-like 1 [Arabidopsis thaliana]
          Length = 967

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 27/279 (9%)
 Frame = +2

Query: 2    KDFDEDFSKSMSQAAYEMKFSDLPSALDTSNYKKSEDNVAA----PKPLLDRNALEKEEK 169
            +DFD+     +++ +YE    D+PS  D S+Y  SED+ +       PL      + E +
Sbjct: 411  RDFDDSLLPRIAEISYENDAEDIPSPPDVSHYLVSEDDTSGLNGNKDPLSFDGMADTEVE 470

Query: 170  RT---SVSNKQVPLPADSLNNESKYPNKSQIVSSSQ-----DINVMERNVESSS-GREVH 322
            R    ++S     LPA +++     P +  + S+S       + V+++ ++ S+      
Sbjct: 471  RRLKEAISASSAVLPAANIDPRIAAPVQFPMASASSVSVPVPVQVVQQAIQPSAMAFPSI 530

Query: 323  EYQAPKSSMIDSERRNIIECNIEDASQNAVGEIPGSELDINMKRRLLILKHGKVDKGHTS 502
             +Q P+     ++     E +++ +     GE+P SELD + +RRLLIL+HG+  +    
Sbjct: 531  PFQQPQQPTSIAKHLVPSEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTR--DP 588

Query: 503  ANQTSSF-----VSSEQSYVKSNCLSFGIREDRSQYP-RMTPLQEMQCDSEYMGREKVDN 664
            A    SF     V +  S+V+S    F + E+      R    +E   DSE +  EK   
Sbjct: 589  APSEPSFPQRPPVQAPPSHVQSRNGWFPVEEEMDPAQIRRAVSKEYPLDSEMIHMEKHRP 648

Query: 665  RPPPSMD-LSNS-------QFGRGPPQEVLCMNGNQRMN 757
            R P     + NS          R PP+E L  +   R N
Sbjct: 649  RHPSFFSKIDNSTQSDRMLHENRRPPKESLRRDEQLRSN 687


>emb|CAB36811.1| putative protein [Arabidopsis thaliana] gi|7268964|emb|CAB81274.1|
            putative protein [Arabidopsis thaliana]
          Length = 995

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 27/279 (9%)
 Frame = +2

Query: 2    KDFDEDFSKSMSQAAYEMKFSDLPSALDTSNYKKSEDNVAA----PKPLLDRNALEKEEK 169
            +DFD+     +++ +YE    D+PS  D S+Y  SED+ +       PL      + E +
Sbjct: 425  RDFDDSLLPRIAEISYENDAEDIPSPPDVSHYLVSEDDTSGLNGNKDPLSFDGMADTEVE 484

Query: 170  RT---SVSNKQVPLPADSLNNESKYPNKSQIVSSSQ-----DINVMERNVESSS-GREVH 322
            R    ++S     LPA +++     P +  + S+S       + V+++ ++ S+      
Sbjct: 485  RRLKEAISASSAVLPAANIDPRIAAPVQFPMASASSVSVPVPVQVVQQAIQPSAMAFPSI 544

Query: 323  EYQAPKSSMIDSERRNIIECNIEDASQNAVGEIPGSELDINMKRRLLILKHGKVDKGHTS 502
             +Q P+     ++     E +++ +     GE+P SELD + +RRLLIL+HG+  +    
Sbjct: 545  PFQQPQQPTSIAKHLVPSEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTR--DP 602

Query: 503  ANQTSSF-----VSSEQSYVKSNCLSFGIREDRSQYP-RMTPLQEMQCDSEYMGREKVDN 664
            A    SF     V +  S+V+S    F + E+      R    +E   DSE +  EK   
Sbjct: 603  APSEPSFPQRPPVQAPPSHVQSRNGWFPVEEEMDPAQIRRAVSKEYPLDSEMIHMEKHRP 662

Query: 665  RPPPSMD-LSNS-------QFGRGPPQEVLCMNGNQRMN 757
            R P     + NS          R PP+E L  +   R N
Sbjct: 663  RHPSFFSKIDNSTQSDRMLHENRRPPKESLRRDEQLRSN 701


>ref|XP_006413749.1| hypothetical protein EUTSA_v10024324mg [Eutrema salsugineum]
            gi|557114919|gb|ESQ55202.1| hypothetical protein
            EUTSA_v10024324mg [Eutrema salsugineum]
          Length = 963

 Score = 64.3 bits (155), Expect = 6e-08
 Identities = 76/284 (26%), Positives = 126/284 (44%), Gaps = 32/284 (11%)
 Frame = +2

Query: 2    KDFDEDFSKSMSQAAYEMKFSDLPSALDTSNYKKSEDNVAA----PKPLLDRNALEKEEK 169
            +DFD+   + +++ +YE    D+PS  D S+Y  SED  +       PL      + E +
Sbjct: 409  RDFDDSLLQRIAEISYENDVEDIPSPPDVSHYLVSEDETSGLNGNKDPLTFDGMADAEVE 468

Query: 170  RT---SVSNKQVPLPADSLNNESKYPNKSQIVSSSQ-------DINVMERNVESSS-GRE 316
            R    ++S   V LPA +++     P +  + S+S         + V+++  + S+    
Sbjct: 469  RRLKEAISASSVVLPAANIDPRISAPVQYPMASASSVSVPIPVPVPVVQQAPQPSAMAFP 528

Query: 317  VHEYQAPK---SSMIDSERRNIIECNIEDASQNAVGEIPGSELDINMKRRLLILKHGKVD 487
              ++Q P      M+ SE       +++ +     GE+P SELD + +RRLLIL+HG+  
Sbjct: 529  SIQFQQPTPIAKHMLPSEP------SLQSSPAREEGEVPESELDPDTRRRLLILQHGQDT 582

Query: 488  KGHTSAN---QTSSFVSSEQSYVKSNCLSFGIREDRSQYP-RMTPLQEMQCDSEYMGREK 655
            +    +         V +   +V+     F + E+  Q P R T  +E   DSE +  EK
Sbjct: 583  RDPAPSEPPFPQRPPVQAPPPHVQPRNGWFPVEEEMDQAPLRRTVSKEYPLDSEMIHMEK 642

Query: 656  VDNRP-PPSM--DLSNS-------QFGRGPPQEVLCMNGNQRMN 757
              NRP  PS    + NS          R PP+E L  +   R N
Sbjct: 643  --NRPRHPSFFSKIDNSTQSDRMLHENRRPPKESLRRDEQLRSN 684


>ref|XP_006413748.1| hypothetical protein EUTSA_v10024324mg [Eutrema salsugineum]
            gi|557114918|gb|ESQ55201.1| hypothetical protein
            EUTSA_v10024324mg [Eutrema salsugineum]
          Length = 952

 Score = 64.3 bits (155), Expect = 6e-08
 Identities = 76/284 (26%), Positives = 126/284 (44%), Gaps = 32/284 (11%)
 Frame = +2

Query: 2    KDFDEDFSKSMSQAAYEMKFSDLPSALDTSNYKKSEDNVAA----PKPLLDRNALEKEEK 169
            +DFD+   + +++ +YE    D+PS  D S+Y  SED  +       PL      + E +
Sbjct: 409  RDFDDSLLQRIAEISYENDVEDIPSPPDVSHYLVSEDETSGLNGNKDPLTFDGMADAEVE 468

Query: 170  RT---SVSNKQVPLPADSLNNESKYPNKSQIVSSSQ-------DINVMERNVESSS-GRE 316
            R    ++S   V LPA +++     P +  + S+S         + V+++  + S+    
Sbjct: 469  RRLKEAISASSVVLPAANIDPRISAPVQYPMASASSVSVPIPVPVPVVQQAPQPSAMAFP 528

Query: 317  VHEYQAPK---SSMIDSERRNIIECNIEDASQNAVGEIPGSELDINMKRRLLILKHGKVD 487
              ++Q P      M+ SE       +++ +     GE+P SELD + +RRLLIL+HG+  
Sbjct: 529  SIQFQQPTPIAKHMLPSEP------SLQSSPAREEGEVPESELDPDTRRRLLILQHGQDT 582

Query: 488  KGHTSAN---QTSSFVSSEQSYVKSNCLSFGIREDRSQYP-RMTPLQEMQCDSEYMGREK 655
            +    +         V +   +V+     F + E+  Q P R T  +E   DSE +  EK
Sbjct: 583  RDPAPSEPPFPQRPPVQAPPPHVQPRNGWFPVEEEMDQAPLRRTVSKEYPLDSEMIHMEK 642

Query: 656  VDNRP-PPSM--DLSNS-------QFGRGPPQEVLCMNGNQRMN 757
              NRP  PS    + NS          R PP+E L  +   R N
Sbjct: 643  --NRPRHPSFFSKIDNSTQSDRMLHENRRPPKESLRRDEQLRSN 684


>gb|EOY28304.1| C-terminal domain phosphatase-like 1 isoform 3 [Theobroma cacao]
          Length = 870

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 76/277 (27%), Positives = 123/277 (44%), Gaps = 22/277 (7%)
 Frame = +2

Query: 2    KDFDEDFSKSMSQAAYEMKFSDLPSALDTSNYKKSEDNVAA----PKPLLDRNALEKEEK 169
            ++FDE   + + + +YE    D+PS  D  NY  SED+ +A      PLL     + E +
Sbjct: 415  REFDEGLLQRIPEISYEDDIKDIPSPPDVGNYLVSEDDTSALNGNKDPLLFDGMADAEVE 474

Query: 170  R---------TSVSNKQVPL-PADSLNNESKYPNKSQIV--SSSQDINVMERNVESSSGR 313
            R         ++VS+  + L P  + + +   P+ S  +  S+SQ   V   N++     
Sbjct: 475  RRLKEAISATSTVSSAAINLDPRLTPSLQYTMPSSSSSIPPSASQPSIVSFSNMQFPLAA 534

Query: 314  EVHEYQAPKSSMIDSERRNIIECNIEDASQNAVGEIPGSELDINMKRRLLILKHGKVDKG 493
             V +  AP +         + E +++ +     GE+P SELD + +RRLLIL+HG+  + 
Sbjct: 535  PVVKPVAPVA---------VPEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRD 585

Query: 494  HTSANQTSSFVSSEQSYV----KSNCLSFGIREDRS--QYPRMTPLQEMQCDSEYMGREK 655
            HT        V           +S    F   E+ S  Q  R  P +E   DSE M  EK
Sbjct: 586  HTPPEPAFPPVRPTMQVSVPRGQSRGSWFAAEEEMSPRQLNRAAP-KEFPLDSERMHIEK 644

Query: 656  VDNRPPPSMDLSNSQFGRGPPQEVLCMNGNQRMNQKS 766
              +R PP      S      P + L +  NQR+++++
Sbjct: 645  --HRHPPFFPKVESSI----PSDRL-LRENQRLSKEA 674


>gb|EOY28303.1| C-terminal domain phosphatase-like 1 isoform 2 [Theobroma cacao]
          Length = 984

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 76/277 (27%), Positives = 123/277 (44%), Gaps = 22/277 (7%)
 Frame = +2

Query: 2    KDFDEDFSKSMSQAAYEMKFSDLPSALDTSNYKKSEDNVAA----PKPLLDRNALEKEEK 169
            ++FDE   + + + +YE    D+PS  D  NY  SED+ +A      PLL     + E +
Sbjct: 415  REFDEGLLQRIPEISYEDDIKDIPSPPDVGNYLVSEDDTSALNGNKDPLLFDGMADAEVE 474

Query: 170  R---------TSVSNKQVPL-PADSLNNESKYPNKSQIV--SSSQDINVMERNVESSSGR 313
            R         ++VS+  + L P  + + +   P+ S  +  S+SQ   V   N++     
Sbjct: 475  RRLKEAISATSTVSSAAINLDPRLTPSLQYTMPSSSSSIPPSASQPSIVSFSNMQFPLAA 534

Query: 314  EVHEYQAPKSSMIDSERRNIIECNIEDASQNAVGEIPGSELDINMKRRLLILKHGKVDKG 493
             V +  AP +         + E +++ +     GE+P SELD + +RRLLIL+HG+  + 
Sbjct: 535  PVVKPVAPVA---------VPEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRD 585

Query: 494  HTSANQTSSFVSSEQSYV----KSNCLSFGIREDRS--QYPRMTPLQEMQCDSEYMGREK 655
            HT        V           +S    F   E+ S  Q  R  P +E   DSE M  EK
Sbjct: 586  HTPPEPAFPPVRPTMQVSVPRGQSRGSWFAAEEEMSPRQLNRAAP-KEFPLDSERMHIEK 644

Query: 656  VDNRPPPSMDLSNSQFGRGPPQEVLCMNGNQRMNQKS 766
              +R PP      S      P + L +  NQR+++++
Sbjct: 645  --HRHPPFFPKVESSI----PSDRL-LRENQRLSKEA 674


>gb|EOY28302.1| C-terminal domain phosphatase-like 1 isoform 1 [Theobroma cacao]
          Length = 978

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 76/277 (27%), Positives = 123/277 (44%), Gaps = 22/277 (7%)
 Frame = +2

Query: 2    KDFDEDFSKSMSQAAYEMKFSDLPSALDTSNYKKSEDNVAA----PKPLLDRNALEKEEK 169
            ++FDE   + + + +YE    D+PS  D  NY  SED+ +A      PLL     + E +
Sbjct: 415  REFDEGLLQRIPEISYEDDIKDIPSPPDVGNYLVSEDDTSALNGNKDPLLFDGMADAEVE 474

Query: 170  R---------TSVSNKQVPL-PADSLNNESKYPNKSQIV--SSSQDINVMERNVESSSGR 313
            R         ++VS+  + L P  + + +   P+ S  +  S+SQ   V   N++     
Sbjct: 475  RRLKEAISATSTVSSAAINLDPRLTPSLQYTMPSSSSSIPPSASQPSIVSFSNMQFPLAA 534

Query: 314  EVHEYQAPKSSMIDSERRNIIECNIEDASQNAVGEIPGSELDINMKRRLLILKHGKVDKG 493
             V +  AP +         + E +++ +     GE+P SELD + +RRLLIL+HG+  + 
Sbjct: 535  PVVKPVAPVA---------VPEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRD 585

Query: 494  HTSANQTSSFVSSEQSYV----KSNCLSFGIREDRS--QYPRMTPLQEMQCDSEYMGREK 655
            HT        V           +S    F   E+ S  Q  R  P +E   DSE M  EK
Sbjct: 586  HTPPEPAFPPVRPTMQVSVPRGQSRGSWFAAEEEMSPRQLNRAAP-KEFPLDSERMHIEK 644

Query: 656  VDNRPPPSMDLSNSQFGRGPPQEVLCMNGNQRMNQKS 766
              +R PP      S      P + L +  NQR+++++
Sbjct: 645  --HRHPPFFPKVESSI----PSDRL-LRENQRLSKEA 674


>gb|ESW31299.1| hypothetical protein PHAVU_002G226900g [Phaseolus vulgaris]
          Length = 964

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 66/239 (27%), Positives = 103/239 (43%), Gaps = 21/239 (8%)
 Frame = +2

Query: 2    KDFDEDFSKSMSQAAYEMKFSDLPSALDTSNYKKSEDNVAAP------KPLLDRNALEKE 163
            K+FD+   + + Q AYE    D+P   D SNY  SED+ ++        P L  +  + E
Sbjct: 389  KEFDDGLLQKIPQVAYEDDIKDIPIPPDVSNYLVSEDDGSSAISNGNRDPFLFDSMGDAE 448

Query: 164  EKRTSVSNKQVPLPADSLNNESKYP----NKSQIVSSSQDINVMERNVESSSGRE----- 316
             +R S    + P   D+L+  S  P    N    ++S Q   V   +    + +      
Sbjct: 449  VERKSKVPTRAPNEHDALSAASTIPVTTANLDPRLTSLQYAMVSSGSAPPPTAQASMMPF 508

Query: 317  VH-EYQAPKSSMIDSERRNIIECNIEDASQNAVGEIPGSELDINMKRRLLILKHGKVDKG 493
             H ++  P + +    +    E ++  +     GE+P SELD + +RRLLIL+HG+  + 
Sbjct: 509  THVQFPQPAALVKPMGQAAPSESSLHSSPAREEGEVPESELDPDTRRRLLILQHGQDTRD 568

Query: 494  HTSANQTSSF---VSSEQSYVKSNCLSFGIREDRSQYP--RMTPLQEMQCDSEYMGREK 655
            HTS   T +    V      V S    F   ED    P  R+ P +E   DS  +  EK
Sbjct: 569  HTSNEPTYAIRHPVPVSAPRVSSRGGWFPAEEDIGSQPLNRVVP-KEFSVDSGSLVIEK 626


>gb|EXB82798.1| RNA polymerase II C-terminal domain phosphatase-like 1 [Morus
           notabilis]
          Length = 998

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 6/172 (3%)
 Frame = +2

Query: 2   KDFDEDFSKSMSQAAYEMKFSDLPSALDTSNYKKSEDNVAAPK-----PLLDRNALEKEE 166
           K+FD+   + + + +YE     +PS  D SNY  SED+ +A       P  D  A  + E
Sbjct: 398 KEFDDGLLQKIPEVSYEDDIKHIPSPPDVSNYLASEDDGSASNGNRDLPAFDGMADAEVE 457

Query: 167 KRTSVSNKQVPLPADSLNNESKY-PNKSQIVSSSQDINVMERNVESSSGREVHEYQAPKS 343
           +R     + +   + ++N + +  P +  + SSS  +      V       +   Q P+ 
Sbjct: 458 RRLK---EAISAASSAINPDPRLSPLQYTVPSSSGSVPPPTTQVSMMPFPNI---QFPQV 511

Query: 344 SMIDSERRNIIECNIEDASQNAVGEIPGSELDINMKRRLLILKHGKVDKGHT 499
           + +       +E +++ +     GE+P SELD + +RRLLIL+HG+  + HT
Sbjct: 512 ASVVKPYIGSVESSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTREHT 563


>ref|XP_006377325.1| hypothetical protein POPTR_0011s04910g [Populus trichocarpa]
            gi|550327613|gb|ERP55122.1| hypothetical protein
            POPTR_0011s04910g [Populus trichocarpa]
          Length = 990

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 73/303 (24%), Positives = 133/303 (43%), Gaps = 28/303 (9%)
 Frame = +2

Query: 2    KDFDEDFSKSMSQAAYEMKFSDLPSALDTSNYKKSEDNVAAPK-----PLLDRNALEKEE 166
            K+FDE   + + + AYE   S++PS  D SNY  SED+ +A       P  D  A  + E
Sbjct: 412  KEFDEGLLQKIPEVAYEDDTSNIPSPPDVSNYLVSEDDASAANGNRDPPSFDSTADAEVE 471

Query: 167  KR-------TSVSNKQVPLPADSLNN------ESKYPNKSQIVSSSQDINVMERNVESSS 307
            +R       +S     +P    SL+       +    + S ++ +SQ   +  +    +S
Sbjct: 472  RRLKEAVSASSTIPSTIPSTVSSLDPRLLQSLQYAVASSSSLMPASQPSMLASQQPVPAS 531

Query: 308  GREVHEY---QAPKSSMIDSERRNII--ECNIEDASQNAVGEIPGSELDINMKRRLLILK 472
               +  +   Q P+ + +  +   ++  E +++ +     GE+P SELD + +RRLLIL+
Sbjct: 532  QTSMMPFPNTQFPQVAPLVKQLGQVVHPEPSLQSSPAREEGEVPESELDPDTRRRLLILQ 591

Query: 473  HGKVDKGHTSAN-----QTSSFVSSEQSYVKSNCLSFGIREDRSQYPRMTPLQEMQCDSE 637
            HG+  + +  +      + S+ VS+  ++V+S      + E+ +        +E   DS+
Sbjct: 592  HGQDSRDNAPSESPFPARPSAPVSA--AHVQSRGSWVPVEEEMTPRQLNRTPREFPLDSD 649

Query: 638  YMGREKVDNRPPPSMDLSNSQFGRGPPQEVLCMNGNQRMNQKSNKFTCPSDNYPRTLTWS 817
             M  EK     P       S      P + + ++ NQR+ +++     P  N    L  S
Sbjct: 650  PMNIEKHQTHHPSFFPKVESNI----PSDRM-IHENQRLPKEA-----PYRNDRMRLNHS 699

Query: 818  VPN 826
             PN
Sbjct: 700  TPN 702


>ref|XP_006827806.1| hypothetical protein AMTR_s00009p00267690 [Amborella trichopoda]
           gi|548832426|gb|ERM95222.1| hypothetical protein
           AMTR_s00009p00267690 [Amborella trichopoda]
          Length = 942

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 9/174 (5%)
 Frame = +2

Query: 2   KDFDEDFSKSMSQAAYEMKFSDLPSALDTSNYKKSED---------NVAAPKPLLDRNAL 154
           KDFD+   K +    YE   S LPSA D+SNY  SED         ++  P+ ++D + +
Sbjct: 393 KDFDDVLLKRIPDVFYEDDISCLPSAPDSSNYLLSEDDSSVLNGNKDLPIPEGMVD-SEV 451

Query: 155 EKEEKRTSVSNKQVPLPADSLNNESKYPNKSQIVSSSQDINVMERNVESSSGREVHEYQA 334
           E+  K  + + + +P    + N E +     Q V+S+ ++ + +   +        +Y  
Sbjct: 452 ERRLKDANFAMQAMPTSTSNNNFERRPTMSLQHVASTSNM-ISQSPCQGPMSLNNKQYNH 510

Query: 335 PKSSMIDSERRNIIECNIEDASQNAVGEIPGSELDINMKRRLLILKHGKVDKGH 496
              S+  S      +  ++ +     GE+P SELD + +RRLLIL+HG+  + H
Sbjct: 511 AVPSLKPSGHICSSDSTLQCSPGREEGEVPESELDPDTRRRLLILQHGQDTREH 564


>ref|XP_006597421.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like isoform X3 [Glycine max]
          Length = 932

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 10/178 (5%)
 Frame = +2

Query: 2   KDFDEDFSKSMSQAAYEMKFSDLPSALDTSNYKKSEDNVAAPKP-----LLDRNA---LE 157
           KDFD+   + +   AYE    D+PS  D SNY  SED+ +A        L D  A   +E
Sbjct: 391 KDFDDGLLQKIPLIAYEDDIKDIPSPPDVSNYLVSEDDASASNGNKNLLLFDGMADAEVE 450

Query: 158 KEEKRTSVSNKQVPLPADSLNNESKYPNKSQIVSSSQDINVMERNVESSSGREVHEYQAP 337
           +  K    ++  VP    +L+    + +  Q    S    V     ++S   +    Q P
Sbjct: 451 RRLKDAISASSTVPAMTTNLDPRLAFNSSLQYTMVSSSGTVPPPTAQASIV-QFGNVQFP 509

Query: 338 KSSMIDSERRNIIEC--NIEDASQNAVGEIPGSELDINMKRRLLILKHGKVDKGHTSA 505
           + + +      +     ++  +     GE+P SELD++ +RRLLIL+HG+  + HTS+
Sbjct: 510 QPNTLVKPICQVTPPGPSLHSSPAREEGEVPESELDLDTRRRLLILQHGQDTREHTSS 567


>ref|XP_006597420.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like isoform X2 [Glycine max]
          Length = 937

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 10/178 (5%)
 Frame = +2

Query: 2   KDFDEDFSKSMSQAAYEMKFSDLPSALDTSNYKKSEDNVAAPKP-----LLDRNA---LE 157
           KDFD+   + +   AYE    D+PS  D SNY  SED+ +A        L D  A   +E
Sbjct: 391 KDFDDGLLQKIPLIAYEDDIKDIPSPPDVSNYLVSEDDASASNGNKNLLLFDGMADAEVE 450

Query: 158 KEEKRTSVSNKQVPLPADSLNNESKYPNKSQIVSSSQDINVMERNVESSSGREVHEYQAP 337
           +  K    ++  VP    +L+    + +  Q    S    V     ++S   +    Q P
Sbjct: 451 RRLKDAISASSTVPAMTTNLDPRLAFNSSLQYTMVSSSGTVPPPTAQASIV-QFGNVQFP 509

Query: 338 KSSMIDSERRNIIEC--NIEDASQNAVGEIPGSELDINMKRRLLILKHGKVDKGHTSA 505
           + + +      +     ++  +     GE+P SELD++ +RRLLIL+HG+  + HTS+
Sbjct: 510 QPNTLVKPICQVTPPGPSLHSSPAREEGEVPESELDLDTRRRLLILQHGQDTREHTSS 567


>ref|XP_004505032.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Cicer arietinum]
          Length = 951

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 7/175 (4%)
 Frame = +2

Query: 2   KDFDEDFSKSMSQAAYEMKFSDLPSALDTSNYKKSEDNVAAPKPLLDRNAL------EKE 163
           KDFD+   + +SQ AYE    D+  A D SNY  SED+ +A     D  A       E E
Sbjct: 388 KDFDDGLLQKISQIAYENNTRDISPAPDVSNYLVSEDDGSASYANRDPFAFDGMADAEVE 447

Query: 164 EKRTSVSNKQVPLPADSLNNESKYPNKSQIVSSSQDINVMERNVESSSGREVH-EYQAPK 340
            K     +    +P  +   + +  +  Q    S   +V+    ++S     H ++  P 
Sbjct: 448 RKLKDAISAASAIPMTTAKLDPRLTSSLQYTMVSPG-SVLPPAAQASMIPLPHTQFPQPA 506

Query: 341 SSMIDSERRNIIECNIEDASQNAVGEIPGSELDINMKRRLLILKHGKVDKGHTSA 505
           + +    +    E ++  +     GE+P SELD + +RRLLIL+HG+ ++ HTS+
Sbjct: 507 TLVKPIGQVAPSELSLHSSPAREEGEVPESELDPDTRRRLLILQHGQDNRDHTSS 561


>ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like isoform X1 [Glycine max]
          Length = 958

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 10/178 (5%)
 Frame = +2

Query: 2   KDFDEDFSKSMSQAAYEMKFSDLPSALDTSNYKKSEDNVAAPKP-----LLDRNA---LE 157
           KDFD+   + +   AYE    D+PS  D SNY  SED+ +A        L D  A   +E
Sbjct: 391 KDFDDGLLQKIPLIAYEDDIKDIPSPPDVSNYLVSEDDASASNGNKNLLLFDGMADAEVE 450

Query: 158 KEEKRTSVSNKQVPLPADSLNNESKYPNKSQIVSSSQDINVMERNVESSSGREVHEYQAP 337
           +  K    ++  VP    +L+    + +  Q    S    V     ++S   +    Q P
Sbjct: 451 RRLKDAISASSTVPAMTTNLDPRLAFNSSLQYTMVSSSGTVPPPTAQASIV-QFGNVQFP 509

Query: 338 KSSMIDSERRNIIEC--NIEDASQNAVGEIPGSELDINMKRRLLILKHGKVDKGHTSA 505
           + + +      +     ++  +     GE+P SELD++ +RRLLIL+HG+  + HTS+
Sbjct: 510 QPNTLVKPICQVTPPGPSLHSSPAREEGEVPESELDLDTRRRLLILQHGQDTREHTSS 567


>dbj|BAF01152.1| hypothetical protein [Arabidopsis thaliana]
          Length = 967

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 71/279 (25%), Positives = 122/279 (43%), Gaps = 27/279 (9%)
 Frame = +2

Query: 2    KDFDEDFSKSMSQAAYEMKFSDLPSALDTSNYKKSEDNVAA----PKPLLDRNALEKEEK 169
            +DFD+     +++ +YE    D+PS  D S+Y  S D+ +       PL      + E +
Sbjct: 411  RDFDDSLLPRIAEISYENDAEDIPSPPDVSHYLVSVDDTSGLNGNKDPLSFDGMADTEVE 470

Query: 170  RT---SVSNKQVPLPADSLNNESKYPNKSQIVSSSQ-----DINVMERNVESSS-GREVH 322
            R    ++S     LPA +++     P +  + S+S       + V+++ ++ S+      
Sbjct: 471  RRLKEAISASSAVLPAANIDPRIAAPVQFPMASASSVSVPVPVQVVQQAIQPSAMAFPSI 530

Query: 323  EYQAPKSSMIDSERRNIIECNIEDASQNAVGEIPGSELDINMKRRLLILKHGKVDKGHTS 502
             +Q P+     ++     E +++ +     GE+P SELD + +RRLLIL+HG+  +    
Sbjct: 531  PFQQPQQPTSIAKHLVPSEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTR--DP 588

Query: 503  ANQTSSF-----VSSEQSYVKSNCLSFGIREDRSQYP-RMTPLQEMQCDSEYMGREKVDN 664
            A    SF     V +  S+V+S    F + E+      R    +E   DSE +  EK   
Sbjct: 589  APSEPSFPQRPPVQAPPSHVQSRNGWFPVEEEMDPAQIRRAVSKEYPLDSEMIHMEKHRP 648

Query: 665  RPPPSMD-LSNS-------QFGRGPPQEVLCMNGNQRMN 757
            R P     + NS          R PP+E L  +   R N
Sbjct: 649  RHPSFFSKIDNSTQSDRMLHENRRPPKESLRRDEQLRSN 687


>ref|XP_006583810.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like isoform X2 [Glycine max]
          Length = 929

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 6/174 (3%)
 Frame = +2

Query: 2   KDFDEDFSKSMSQAAYEMKFSDLPSALDTSNYKKSEDNVAAPKP-----LLDRNA-LEKE 163
           KDFD+   + + Q AYE    D+PS  D SNY  SED+ +         L D  A  E E
Sbjct: 392 KDFDDGLLQKIPQIAYEDDIKDIPSPPDVSNYLVSEDDGSISNGHRDPFLFDGMADAEVE 451

Query: 164 EKRTSVSNKQVPLPADSLNNESKYPNKSQIVSSSQDINVMERNVESSSGREVHEYQAPKS 343
            K     +    +P  + N + +  +    +  S  +              V ++  P +
Sbjct: 452 RKLKDALSAASTIPVTTANLDPRLTSLQYTMVPSGSVPPPTAQASMMPFPHV-QFPQPAT 510

Query: 344 SMIDSERRNIIECNIEDASQNAVGEIPGSELDINMKRRLLILKHGKVDKGHTSA 505
            +    +    E ++  +     GE+P SELD + +RRLLIL+HG+  + H SA
Sbjct: 511 LVKPMGQAAPSEPSLHSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDHASA 564


>ref|XP_003529311.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like isoform X1 [Glycine max]
          Length = 956

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 6/174 (3%)
 Frame = +2

Query: 2   KDFDEDFSKSMSQAAYEMKFSDLPSALDTSNYKKSEDNVAAPKP-----LLDRNA-LEKE 163
           KDFD+   + + Q AYE    D+PS  D SNY  SED+ +         L D  A  E E
Sbjct: 392 KDFDDGLLQKIPQIAYEDDIKDIPSPPDVSNYLVSEDDGSISNGHRDPFLFDGMADAEVE 451

Query: 164 EKRTSVSNKQVPLPADSLNNESKYPNKSQIVSSSQDINVMERNVESSSGREVHEYQAPKS 343
            K     +    +P  + N + +  +    +  S  +              V ++  P +
Sbjct: 452 RKLKDALSAASTIPVTTANLDPRLTSLQYTMVPSGSVPPPTAQASMMPFPHV-QFPQPAT 510

Query: 344 SMIDSERRNIIECNIEDASQNAVGEIPGSELDINMKRRLLILKHGKVDKGHTSA 505
            +    +    E ++  +     GE+P SELD + +RRLLIL+HG+  + H SA
Sbjct: 511 LVKPMGQAAPSEPSLHSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDHASA 564