BLASTX nr result
ID: Ephedra28_contig00024574
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00024574
(560 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR17831.1| unknown [Picea sitchensis] 77 3e-12
ref|XP_006488756.1| PREDICTED: signal recognition particle 19 kD... 70 5e-10
ref|XP_006419269.1| hypothetical protein CICLE_v10006189mg [Citr... 70 5e-10
ref|XP_003580402.1| PREDICTED: signal recognition particle 19 kD... 70 5e-10
ref|XP_003579989.1| PREDICTED: signal recognition particle 19 kD... 69 6e-10
ref|XP_003579988.1| PREDICTED: signal recognition particle 19 kD... 69 8e-10
ref|XP_004245487.1| PREDICTED: signal recognition particle 19 kD... 68 2e-09
gb|AFK39251.1| unknown [Medicago truncatula] 68 2e-09
gb|EXB68648.1| Signal recognition particle 19 kDa protein [Morus... 67 4e-09
ref|XP_006343819.1| PREDICTED: signal recognition particle 19 kD... 67 4e-09
ref|XP_004245488.1| PREDICTED: signal recognition particle 19 kD... 67 4e-09
ref|XP_002894097.1| predicted protein [Arabidopsis lyrata subsp.... 67 4e-09
ref|XP_006656064.1| PREDICTED: signal recognition particle 19 kD... 66 5e-09
ref|XP_004965448.1| PREDICTED: signal recognition particle 19 kD... 66 7e-09
ref|NP_001148793.1| signal recognition particle 19 kDa protein [... 66 7e-09
ref|XP_006305666.1| hypothetical protein CARUB_v10010377mg, part... 65 9e-09
gb|EMS52497.1| Signal recognition particle 19 kDa protein [Triti... 65 9e-09
gb|AAF79519.1|AC023673_7 F21D18.11 [Arabidopsis thaliana] 65 9e-09
ref|NP_175250.1| signal recognition particle subunit SRP19 [Arab... 65 9e-09
ref|XP_002866154.1| hypothetical protein ARALYDRAFT_357880 [Arab... 65 9e-09
>gb|ABR17831.1| unknown [Picea sitchensis]
Length = 154
Score = 77.0 bits (188), Expect = 3e-12
Identities = 43/92 (46%), Positives = 58/92 (63%), Gaps = 4/92 (4%)
Frame = +3
Query: 75 NKK*WMII*SVYINLKKTIRHLREMKA**VDQGKEDVRKPA*IDIADSCTFVK----VMA 242
N K W++I VYIN KKT+ R ++A K+ P ++IADSC ++K + A
Sbjct: 23 NIKRWIVIYPVYINSKKTLAEGRRIRA------KKACENPTCVEIADSCIYLKLPCVIEA 76
Query: 243 NKTYPRDFTQRGRVRVQLKHENDTPINPNIKS 338
+K YPRDF QRGRVRVQLK E+ + +NP I S
Sbjct: 77 DKAYPRDFMQRGRVRVQLKREDGSLVNPAIPS 108
>ref|XP_006488756.1| PREDICTED: signal recognition particle 19 kDa protein-like [Citrus
sinensis]
Length = 136
Score = 69.7 bits (169), Expect = 5e-10
Identities = 41/90 (45%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Frame = +3
Query: 81 K*WMII*SVYINLKKTIRHLREMKA**VDQGKEDVRKPA*IDIADSCTFVKVM----ANK 248
K W+I+ VYIN KKTI R + A + P I+IAD C ++K+ +K
Sbjct: 9 KKWVILYPVYINSKKTIAEGRRISA------SKACENPTCIEIADCCQYLKIPHAIEIDK 62
Query: 249 TYPRDFTQRGRVRVQLKHENDTPINPNIKS 338
YPRDF QRGRVRV LK E+ T +NP I S
Sbjct: 63 AYPRDFMQRGRVRVMLKREDGTFVNPAISS 92
>ref|XP_006419269.1| hypothetical protein CICLE_v10006189mg [Citrus clementina]
gi|557521142|gb|ESR32509.1| hypothetical protein
CICLE_v10006189mg [Citrus clementina]
Length = 136
Score = 69.7 bits (169), Expect = 5e-10
Identities = 41/90 (45%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Frame = +3
Query: 81 K*WMII*SVYINLKKTIRHLREMKA**VDQGKEDVRKPA*IDIADSCTFVKVM----ANK 248
K W+I+ VYIN KKTI R + A + P I+IAD C ++K+ +K
Sbjct: 9 KKWVILYPVYINSKKTIAEGRRISA------SKACENPTCIEIADCCQYLKIPHAIEIDK 62
Query: 249 TYPRDFTQRGRVRVQLKHENDTPINPNIKS 338
YPRDF QRGRVRV LK E+ T +NP I S
Sbjct: 63 AYPRDFMQRGRVRVMLKREDGTFVNPAISS 92
>ref|XP_003580402.1| PREDICTED: signal recognition particle 19 kDa protein-like
[Brachypodium distachyon]
Length = 108
Score = 69.7 bits (169), Expect = 5e-10
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Frame = +3
Query: 81 K*WMII*SVYINLKKTIRHLREMKA**VDQGKEDVRKPA*IDIADSCTFVKV---MANKT 251
K W II VY+N KKT+ R + A + P +I DSC ++K+ + +K
Sbjct: 13 KKWDIIYPVYLNSKKTVAEGRRIAA------AKACADPTCNEILDSCAYLKIPCKIEDKA 66
Query: 252 YPRDFTQRGRVRVQLKHENDTPINPNIKSGVIS 350
YPRDF QRGRVRVQLK+E +P+NP I++ +S
Sbjct: 67 YPRDFFQRGRVRVQLKNEAGSPVNPAIRTSDLS 99
>ref|XP_003579989.1| PREDICTED: signal recognition particle 19 kDa protein-like
[Brachypodium distachyon]
Length = 139
Score = 69.3 bits (168), Expect = 6e-10
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
Frame = +3
Query: 81 K*WMII*SVYINLKKTIRHLREMKA**VDQGKEDVRKPA*IDIADSCTFVKVMA----NK 248
K W +I VY+N KKT+ R + A + P +I DSCT++K+ +K
Sbjct: 13 KKWNVIYPVYLNSKKTVAEGRRIAA------AKACADPTCSEILDSCTYLKIPCKIEQDK 66
Query: 249 TYPRDFTQRGRVRVQLKHENDTPINPNIKS 338
YPRDF QRGRVRVQL++E+ +P+NP I++
Sbjct: 67 AYPRDFFQRGRVRVQLQNEDGSPVNPAIRT 96
>ref|XP_003579988.1| PREDICTED: signal recognition particle 19 kDa protein-like
[Brachypodium distachyon]
Length = 139
Score = 68.9 bits (167), Expect = 8e-10
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
Frame = +3
Query: 81 K*WMII*SVYINLKKTIRHLREMKA**VDQGKEDVRKPA*IDIADSCTFVKVMA----NK 248
K W +I VY+N KKT+ R + A + P +I DSCT++K+ +K
Sbjct: 13 KKWNVIYPVYLNSKKTVAEGRRIAA------AKACADPTCNEILDSCTYLKIPCKIEQDK 66
Query: 249 TYPRDFTQRGRVRVQLKHENDTPINPNIKS 338
YPRDF QRGRVRVQL++E+ +P+NP I++
Sbjct: 67 AYPRDFFQRGRVRVQLQNEDGSPVNPAIRT 96
>ref|XP_004245487.1| PREDICTED: signal recognition particle 19 kDa protein-like isoform
1 [Solanum lycopersicum]
Length = 140
Score = 67.8 bits (164), Expect = 2e-09
Identities = 45/103 (43%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Frame = +3
Query: 75 NKK*WMII*SVYINLKKTIRHLREMKA**VDQGKEDVRKPA*IDIADSCTFVKVMA---- 242
N K W I+ VYIN KKTI R + + P +I+D C F+K+
Sbjct: 7 NIKKWNILYPVYINSKKTIAEGRRICV------TKACENPTCTEISDCCNFLKIPCAIEL 60
Query: 243 NKTYPRDFTQRGRVRVQLKHENDTPINPNIKSGV-ISGPLLFI 368
+K YPRDF QRGRVRV LK E+ TP NP I S + I+G L I
Sbjct: 61 DKAYPRDFMQRGRVRVLLKREDGTPYNPVIPSRLYIAGKQLMI 103
>gb|AFK39251.1| unknown [Medicago truncatula]
Length = 138
Score = 67.8 bits (164), Expect = 2e-09
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Frame = +3
Query: 81 K*WMII*SVYINLKKTIRHLREMKA**VDQGKEDVRKPA*IDIADSCTFVK----VMANK 248
K W+++ VYIN KKT+ R + + P ++I D C F+K + +K
Sbjct: 9 KKWIVLYPVYINSKKTVAEGRRIGI------SKSCENPTCVEIGDCCNFLKLPFAIELDK 62
Query: 249 TYPRDFTQRGRVRVQLKHENDTPINPNIKS 338
YPRDF QRGRVRV LK+E+ T INP+I S
Sbjct: 63 AYPRDFMQRGRVRVLLKNEDGTLINPSIAS 92
>gb|EXB68648.1| Signal recognition particle 19 kDa protein [Morus notabilis]
Length = 220
Score = 66.6 bits (161), Expect = 4e-09
Identities = 42/104 (40%), Positives = 55/104 (52%), Gaps = 8/104 (7%)
Frame = +3
Query: 75 NKK*WMII*SVYINLKKTIRHLREMKA**VDQGKEDVRKPA*IDIADSCTFVK----VMA 242
N K W+++ VYIN KKTI R + + P +I D CT K +
Sbjct: 10 NIKKWVVVYPVYINSKKTIAEGRRINV------SKACENPTCAEIGDCCTHFKLPFAIEI 63
Query: 243 NKTYPRDFTQRGRVRVQLKHENDTPINPNIKS----GVISGPLL 362
+K YPRDF QRGRVRV LK ++ TP NP I S +IS P++
Sbjct: 64 DKAYPRDFMQRGRVRVLLKKDDGTPCNPAISSRNACSIISLPVV 107
>ref|XP_006343819.1| PREDICTED: signal recognition particle 19 kDa protein-like [Solanum
tuberosum]
Length = 135
Score = 66.6 bits (161), Expect = 4e-09
Identities = 41/92 (44%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Frame = +3
Query: 75 NKK*WMII*SVYINLKKTIRHLREMKA**VDQGKEDVRKPA*IDIADSCTFVKVMA---- 242
N K W I+ VYIN KKTI R + + P +I+D C F+K+
Sbjct: 7 NIKKWNILYPVYINSKKTIAEGRRICV------TKACENPTCTEISDCCNFLKIPCAIEL 60
Query: 243 NKTYPRDFTQRGRVRVQLKHENDTPINPNIKS 338
+K YPRDF QRGRVRV LK E+ TP NP I S
Sbjct: 61 DKAYPRDFMQRGRVRVLLKREDGTPYNPVIPS 92
>ref|XP_004245488.1| PREDICTED: signal recognition particle 19 kDa protein-like isoform
2 [Solanum lycopersicum]
gi|460399930|ref|XP_004245489.1| PREDICTED: signal
recognition particle 19 kDa protein-like isoform 3
[Solanum lycopersicum]
Length = 135
Score = 66.6 bits (161), Expect = 4e-09
Identities = 41/92 (44%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Frame = +3
Query: 75 NKK*WMII*SVYINLKKTIRHLREMKA**VDQGKEDVRKPA*IDIADSCTFVKVMA---- 242
N K W I+ VYIN KKTI R + + P +I+D C F+K+
Sbjct: 7 NIKKWNILYPVYINSKKTIAEGRRICV------TKACENPTCTEISDCCNFLKIPCAIEL 60
Query: 243 NKTYPRDFTQRGRVRVQLKHENDTPINPNIKS 338
+K YPRDF QRGRVRV LK E+ TP NP I S
Sbjct: 61 DKAYPRDFMQRGRVRVLLKREDGTPYNPVIPS 92
>ref|XP_002894097.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339939|gb|EFH70356.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 145
Score = 66.6 bits (161), Expect = 4e-09
Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Frame = +3
Query: 75 NKK*WMII*SVYINLKKTIRHLREMKA**VDQGKEDVRKPA*IDIADSCTFVK----VMA 242
N K W++I VYIN KKT+ R + + P I+I+D C +K V
Sbjct: 7 NIKKWVVIYPVYINSKKTVAEGRRISV------SKSCENPNCIEISDCCKHLKLPSAVEI 60
Query: 243 NKTYPRDFTQRGRVRVQLKHENDTPINPNIKS 338
+K YPRDF Q GRVRVQLK E+ T +NP+I S
Sbjct: 61 DKAYPRDFMQVGRVRVQLKREDGTLLNPSITS 92
>ref|XP_006656064.1| PREDICTED: signal recognition particle 19 kDa protein-like [Oryza
brachyantha]
Length = 142
Score = 66.2 bits (160), Expect = 5e-09
Identities = 40/90 (44%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Frame = +3
Query: 81 K*WMII*SVYINLKKTIRHLREMKA**VDQGKEDVRKPA*IDIADSCTFVKVM----ANK 248
K W +I VYIN KKT+ R + + GK P ++IAD C +K+ +K
Sbjct: 15 KKWNVIYPVYINSKKTVAEGRRIAS-----GKA-CPDPTCVEIADCCHHLKIPHAIELDK 68
Query: 249 TYPRDFTQRGRVRVQLKHENDTPINPNIKS 338
YPRDF Q GRVRVQLK E+ +P+NP+IK+
Sbjct: 69 AYPRDFFQVGRVRVQLKKEDGSPVNPSIKT 98
>ref|XP_004965448.1| PREDICTED: signal recognition particle 19 kDa protein-like [Setaria
italica]
Length = 140
Score = 65.9 bits (159), Expect = 7e-09
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Frame = +3
Query: 81 K*WMII*SVYINLKKTIRHLREMKA**VDQGKEDVRKPA*IDIADSCTFVKVM----ANK 248
K W +I VY+N KKT+ R + A + P I+IAD C+ +K+ +K
Sbjct: 13 KKWNVIYPVYLNSKKTVAEGRRIAA------SKACPDPTCIEIADCCSHLKIPYAIELDK 66
Query: 249 TYPRDFTQRGRVRVQLKHENDTPINPNIKS 338
YPRDF Q GRVRVQLK ++ +P+NP IK+
Sbjct: 67 AYPRDFFQVGRVRVQLKKDDGSPVNPAIKT 96
>ref|NP_001148793.1| signal recognition particle 19 kDa protein [Zea mays]
gi|194696834|gb|ACF82501.1| unknown [Zea mays]
gi|195609450|gb|ACG26555.1| signal recognition particle
19 kDa protein [Zea mays] gi|195622204|gb|ACG32932.1|
signal recognition particle 19 kDa protein [Zea mays]
gi|195628030|gb|ACG35845.1| signal recognition particle
19 kDa protein [Zea mays] gi|195649103|gb|ACG44019.1|
signal recognition particle 19 kDa protein [Zea mays]
gi|223975521|gb|ACN31948.1| unknown [Zea mays]
gi|223975625|gb|ACN32000.1| unknown [Zea mays]
gi|414584853|tpg|DAA35424.1| TPA: Signal recognition
particle protein isoform 1 [Zea mays]
gi|414584854|tpg|DAA35425.1| TPA: Signal recognition
particle protein isoform 2 [Zea mays]
gi|414586985|tpg|DAA37556.1| TPA: Signal recognition
particle protein isoform 1 [Zea mays]
gi|414586986|tpg|DAA37557.1| TPA: Signal recognition
particle protein isoform 2 [Zea mays]
Length = 146
Score = 65.9 bits (159), Expect = 7e-09
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Frame = +3
Query: 81 K*WMII*SVYINLKKTIRHLREMKA**VDQGKEDVRKPA*IDIADSCTFVKVM----ANK 248
K W II VY+N KKT+ R + A + P I+IAD C+ +K+ +K
Sbjct: 21 KKWNIIYPVYLNSKKTVAEGRRIAA------AKACPDPTCIEIADCCSHLKIPHAIELDK 74
Query: 249 TYPRDFTQRGRVRVQLKHENDTPINPNIKS 338
YPRDF Q GRVRVQLK ++ +P+NP IK+
Sbjct: 75 AYPRDFFQVGRVRVQLKKDDGSPVNPAIKT 104
>ref|XP_006305666.1| hypothetical protein CARUB_v10010377mg, partial [Capsella rubella]
gi|482574377|gb|EOA38564.1| hypothetical protein
CARUB_v10010377mg, partial [Capsella rubella]
Length = 189
Score = 65.5 bits (158), Expect = 9e-09
Identities = 42/92 (45%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Frame = +3
Query: 75 NKK*WMII*SVYINLKKTIRHLREMKA**VDQGKEDVRKPA*IDIADSCTFVK----VMA 242
N K W+++ VYIN KKT+ R + V Q E+ P I+I+D C +K V
Sbjct: 51 NIKKWVVVYPVYINSKKTVAEGRRIS---VSQACEN---PNCIEISDCCKHLKLPSAVEI 104
Query: 243 NKTYPRDFTQRGRVRVQLKHENDTPINPNIKS 338
+K YPRDF Q GRVRVQLK E+ T +NP I S
Sbjct: 105 DKAYPRDFMQVGRVRVQLKREDGTLLNPAITS 136
>gb|EMS52497.1| Signal recognition particle 19 kDa protein [Triticum urartu]
Length = 183
Score = 65.5 bits (158), Expect = 9e-09
Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Frame = +3
Query: 81 K*WMII*SVYINLKKTIRHLREMKA**VDQGKEDVRKPA*IDIADSCTFVKVMA----NK 248
K W II VY+N KKT+ R + A + P I+IADSC ++K+ +K
Sbjct: 90 KKWKIIYPVYLNSKKTVAEGRRIAA------AKACPDPTCIEIADSCAYLKIPRAIELDK 143
Query: 249 TYPRDFTQRGRVRVQLKHENDTPINPNI 332
YPRDF Q GRVRVQL +++ +P+NP I
Sbjct: 144 AYPRDFFQVGRVRVQLTNDDGSPVNPAI 171
>gb|AAF79519.1|AC023673_7 F21D18.11 [Arabidopsis thaliana]
Length = 242
Score = 65.5 bits (158), Expect = 9e-09
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Frame = +3
Query: 75 NKK*WMII*SVYINLKKTIRHLREMKA**VDQGKEDVRKPA*IDIADSCTFVK----VMA 242
N K W++I VYIN KKT+ R + + P I+I+D C +K V
Sbjct: 7 NIKKWVVIYPVYINSKKTVAEGRRISV------SKSCENPNCIEISDCCKHLKLPSAVEI 60
Query: 243 NKTYPRDFTQRGRVRVQLKHENDTPINPNIKS 338
+K YPRDF Q GRVRVQLK E+ T +NP I S
Sbjct: 61 DKAYPRDFMQVGRVRVQLKREDGTLLNPAITS 92
>ref|NP_175250.1| signal recognition particle subunit SRP19 [Arabidopsis thaliana]
gi|21542239|sp|Q943Z6.1|SRP19_ARATH RecName: Full=Signal
recognition particle 19 kDa protein; Short=SRP19
gi|16612311|gb|AAL27515.1|AF439847_1 At1g48160/F21D18_11
[Arabidopsis thaliana] gi|21593920|gb|AAM65885.1| signal
recognition particle 19 kDa protein subunit, putative
[Arabidopsis thaliana] gi|21928099|gb|AAM78078.1|
At1g48160/F21D18_11 [Arabidopsis thaliana]
gi|332194136|gb|AEE32257.1| signal recognition particle
subunit SRP19 [Arabidopsis thaliana]
Length = 145
Score = 65.5 bits (158), Expect = 9e-09
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Frame = +3
Query: 75 NKK*WMII*SVYINLKKTIRHLREMKA**VDQGKEDVRKPA*IDIADSCTFVK----VMA 242
N K W++I VYIN KKT+ R + + P I+I+D C +K V
Sbjct: 7 NIKKWVVIYPVYINSKKTVAEGRRISV------SKSCENPNCIEISDCCKHLKLPSAVEI 60
Query: 243 NKTYPRDFTQRGRVRVQLKHENDTPINPNIKS 338
+K YPRDF Q GRVRVQLK E+ T +NP I S
Sbjct: 61 DKAYPRDFMQVGRVRVQLKREDGTLLNPAITS 92
>ref|XP_002866154.1| hypothetical protein ARALYDRAFT_357880 [Arabidopsis lyrata subsp.
lyrata] gi|297311989|gb|EFH42413.1| hypothetical protein
ARALYDRAFT_357880 [Arabidopsis lyrata subsp. lyrata]
Length = 145
Score = 65.5 bits (158), Expect = 9e-09
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Frame = +3
Query: 75 NKK*WMII*SVYINLKKTIRHLREMKA**VDQGKEDVRKPA*IDIADSCTFVK----VMA 242
N K W++I VYIN KKT+ R + + P I+I+D C +K V
Sbjct: 7 NIKKWVVIYPVYINSKKTVAEGRRISV------SKSCENPNCIEISDCCKHLKLPSAVEI 60
Query: 243 NKTYPRDFTQRGRVRVQLKHENDTPINPNIKS 338
+K YPRDF Q GRVRVQLK E+ T +NP I S
Sbjct: 61 DKAYPRDFMQVGRVRVQLKREDGTLLNPAITS 92