BLASTX nr result

ID: Ephedra28_contig00024563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00024563
         (723 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_005044529.1| PREDICTED: retinitis pigmentosa 1-like 1 pro...    59   2e-06
ref|XP_006594577.1| PREDICTED: uncharacterized protein YFR016C-l...    59   2e-06
ref|XP_006625663.1| PREDICTED: neurofilament medium polypeptide-...    57   6e-06

>ref|XP_005044529.1| PREDICTED: retinitis pigmentosa 1-like 1 protein [Ficedula
            albicollis]
          Length = 1884

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 49/209 (23%), Positives = 88/209 (42%), Gaps = 8/209 (3%)
 Frame = -3

Query: 625  EETKIEDDSGEGNDLSRSVFQTAAEVISERIAEFNNGGQQINHQEIDMLNQQEAEKVEEN 446
            +E K E+   EG +      +   E + E   E     ++   +E ++  ++E E  EE 
Sbjct: 1592 DEAKTEEAEEEGEETKGEEEEAKEEEVKEEEEEAKEEEEEAKEEE-EVAKEEEGEVKEEE 1650

Query: 445  IIAFSKEASHCKEDKKSEESVCAETENVKSEQDAGNKGIENTEA-DHLEKKGEETRSEGD 269
                 +E     +DK   E+   ETE  + E+   +   E +E     E  G E   EGD
Sbjct: 1651 ----EQEDEEKSKDKDEGENEAVETEEPEDEEVLADDEAETSECRGDAEGSGTENNPEGD 1706

Query: 268  AKNVEVSADKDNIDCESNTQGLAGDFITE------SKPSENPEHNRSCNPDESDMKIESM 107
            A+     A++D  + E + +  +GD   E       KP EN E     +PD++  K +  
Sbjct: 1707 AEEGNEEAEQDEAEAEKDAKPESGDEAEEKNSEGGEKPGENGEEPTGDDPDKAHEKHQDQ 1766

Query: 106  ITSDISHALVE-ENAMLRKEVQMLKDELA 23
              + +S  + + ++  + K ++ LK   A
Sbjct: 1767 GNNKVSEKVSKTKSKKISKRLESLKKSTA 1795


>ref|XP_006594577.1| PREDICTED: uncharacterized protein YFR016C-like isoform X1 [Glycine
           max]
          Length = 921

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 4/203 (1%)
 Frame = -3

Query: 625 EETKIEDDSGEGNDLSRSVFQTAAEVISERIAEFNNGGQQINHQEIDMLNQQEAEKVEEN 446
           EE + E++  E  +      +   E + E + E    G+++   E+D   ++E E VEE 
Sbjct: 27  EEEEEEEEEEEEEEEIEEEEEEEEEEVEEEVEEEEVEGEEVEEDEVDEEEEEEEEVVEEE 86

Query: 445 IIAFSKEASHCKEDKKSEESVCAETENVKSEQDAGNKGIENTEADHLEKKGE----ETRS 278
           +          +E+++  E +  E E  +SEQ A     E  E   +E++GE    E   
Sbjct: 87  V--------EEEEEEEELEEIEVEEEEEESEQRAEEMEEEEEEEVEVEEEGEEEEVEEEE 138

Query: 277 EGDAKNVEVSADKDNIDCESNTQGLAGDFITESKPSENPEHNRSCNPDESDMKIESMITS 98
           EG+ + VE   +++ ++ E   +      + E +  E+ E  +       + K E     
Sbjct: 139 EGEEEEVEEEEEEEEVEVEEEEEEEEEVEVEEKEEKEDEEQQQQQQETVEEKKEERQQQQ 198

Query: 97  DISHALVEENAMLRKEVQMLKDE 29
           +   A+ E+    ++E    K+E
Sbjct: 199 EAEEAVKEQQKKQQQEAMEEKEE 221


>ref|XP_006625663.1| PREDICTED: neurofilament medium polypeptide-like [Lepisosteus
            oculatus]
          Length = 812

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 45/207 (21%), Positives = 89/207 (42%), Gaps = 7/207 (3%)
 Frame = -3

Query: 628  VEETKIEDDSGEGNDLSRSVFQTAAEVISERIAEFNNGGQQINHQEIDMLNQQEAEKVEE 449
            +EETK+ED+  E +D   +V +  A  + E         ++   +E+    + E E  EE
Sbjct: 447  IEETKVEDEKAEMDDALAAVAEELAADLGEAEEAEEAAAEEEEEEEVKEEGEAEGEAAEE 506

Query: 448  NIIAFSK-EASHCKEDKKSEESVCAETENVKSEQDAGNKGIE-NTEADHLE-KKGEETRS 278
             ++A SK E S    +++  E    E E  ++E+    +G E   E +  E K+GEE   
Sbjct: 507  EVVAASKAEVSAAAPEEEEAEEEGEEKEGEEAEEGEAEEGKEAEEEGEEAEAKEGEEEEG 566

Query: 277  EGDAKNVEVSADKDNIDCESNTQGLAGDFITESKPSE----NPEHNRSCNPDESDMKIES 110
            E +A+  + +   +  + E   +G      ++ +P +      E   S   +E     E+
Sbjct: 567  EAEAEEEKEAEAAEGEEAEQAEEGAESPQASKPEPEKEEEAEEEKKESAGEEEEGEADEA 626

Query: 109  MITSDISHALVEENAMLRKEVQMLKDE 29
                +   A  ++  + ++E +   D+
Sbjct: 627  QKEEEKEEAAAKDEKVSKEEEEEAGDK 653


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