BLASTX nr result

ID: Ephedra28_contig00024547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00024547
         (398 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76233.1| unknown [Picea sitchensis]                             200   2e-49
ref|XP_001785617.1| predicted protein [Physcomitrella patens] gi...   102   4e-20
ref|XP_002987943.1| hypothetical protein SELMODRAFT_447140 [Sela...   101   9e-20
ref|XP_002991318.1| hypothetical protein SELMODRAFT_448362 [Sela...   101   9e-20
ref|XP_001760235.1| predicted protein [Physcomitrella patens] gi...    75   7e-12

>gb|ADE76233.1| unknown [Picea sitchensis]
          Length = 440

 Score =  200 bits (508), Expect = 2e-49
 Identities = 90/136 (66%), Positives = 112/136 (82%), Gaps = 4/136 (2%)
 Frame = +1

Query: 1   ESGFCVGRCRSDCFPRVKGLCLSHSKVKYCNITEKDDEIGSPQKVA----DVDLQLPRCL 168
           +SGF +G CR +CFPRVKGLC+S S+V+YC ITE++++I S + +     + +L LP+CL
Sbjct: 87  DSGFRIGACRPECFPRVKGLCISSSQVEYCKITEEEEDIASTETIYPSTDEKNLLLPKCL 146

Query: 169 KMPNIMRFHGERLTLPVKSEGCNMEKKGVPGLSLVADQRYLPYKRPNPHHEAEKIIPAIL 348
           KMPN MRF GERLTLPV    C  EKKG+PGLSLVADQRYLPYK+PNPHHEAEKIIPA+L
Sbjct: 147 KMPNFMRFSGERLTLPVMPSVCGQEKKGIPGLSLVADQRYLPYKKPNPHHEAEKIIPALL 206

Query: 349 FLQHYRENNNSLYWFS 396
           FLQHY ++N++LYWFS
Sbjct: 207 FLQHYEQSNHTLYWFS 222


>ref|XP_001785617.1| predicted protein [Physcomitrella patens]
           gi|162662750|gb|EDQ49564.1| predicted protein
           [Physcomitrella patens]
          Length = 568

 Score =  102 bits (255), Expect = 4e-20
 Identities = 52/130 (40%), Positives = 74/130 (56%), Gaps = 1/130 (0%)
 Frame = +1

Query: 10  FCVGRCRSDCFPRVKGLCLSHSKVKYCNITEKDDEIGSPQKVADVDLQLPRCLKMPNIMR 189
           +C G C ++CF RV  +C +  KV+ C  + + D                    +P  +R
Sbjct: 102 YCTGECNTECFSRVDNICFATDKVRICGGSRRSD--------------------LPKFIR 141

Query: 190 FHGERLTLPVK-SEGCNMEKKGVPGLSLVADQRYLPYKRPNPHHEAEKIIPAILFLQHYR 366
           F GE+ T+PV+   GCN     + GLSLVADQR+LP  +PNPHHEAEK+IPA+L L+ + 
Sbjct: 142 FFGEKRTVPVEWGSGCNEGWHWISGLSLVADQRFLPAGKPNPHHEAEKLIPAVL-LKQFI 200

Query: 367 ENNNSLYWFS 396
             + SL WF+
Sbjct: 201 NQSASLQWFA 210


>ref|XP_002987943.1| hypothetical protein SELMODRAFT_447140 [Selaginella moellendorffii]
           gi|300144332|gb|EFJ11017.1| hypothetical protein
           SELMODRAFT_447140 [Selaginella moellendorffii]
          Length = 470

 Score =  101 bits (252), Expect = 9e-20
 Identities = 56/131 (42%), Positives = 78/131 (59%), Gaps = 2/131 (1%)
 Frame = +1

Query: 10  FCVGRCRSDCFPRV-KGLCLSHSKVKYCNITEKDDEIGSPQKVADVDLQLPRCLKMPNIM 186
           FC G     CF R+ +G+C+S S+V+ C+               D+   LPR      I+
Sbjct: 53  FCSG---GTCFHRLSRGICISASEVRVCD---------------DLPTGLPR------IL 88

Query: 187 RFHGERLTLPVKSEGCNMEK-KGVPGLSLVADQRYLPYKRPNPHHEAEKIIPAILFLQHY 363
           RF GER+TLPV S  C+    + + G S++ADQR+LPY +PNPHHEAEK+IPA L   H+
Sbjct: 89  RFEGERVTLPVVSGECSRASGRWITGTSMLADQRFLPYHKPNPHHEAEKLIPATLLAHHH 148

Query: 364 RENNNSLYWFS 396
            +N+  LYWF+
Sbjct: 149 LKNSTMLYWFA 159


>ref|XP_002991318.1| hypothetical protein SELMODRAFT_448362 [Selaginella moellendorffii]
           gi|300140898|gb|EFJ07616.1| hypothetical protein
           SELMODRAFT_448362 [Selaginella moellendorffii]
          Length = 256

 Score =  101 bits (252), Expect = 9e-20
 Identities = 56/131 (42%), Positives = 77/131 (58%), Gaps = 2/131 (1%)
 Frame = +1

Query: 10  FCVGRCRSDCFPRV-KGLCLSHSKVKYCNITEKDDEIGSPQKVADVDLQLPRCLKMPNIM 186
           FC G     CF R+ +G+C+S S+V+ C     DD                R   +P I+
Sbjct: 49  FCSG---GTCFHRLSRGICISASEVRVC-----DD----------------RPTGLPRIL 84

Query: 187 RFHGERLTLPVKSEGCNMEK-KGVPGLSLVADQRYLPYKRPNPHHEAEKIIPAILFLQHY 363
           RF GER+TLPV S  C+    + + G S++ADQR+LPY +PNPHHEAEK+IPA L   H+
Sbjct: 85  RFEGERVTLPVVSGECSRASGRWITGTSMLADQRFLPYHKPNPHHEAEKLIPATLLAHHH 144

Query: 364 RENNNSLYWFS 396
            +N+  LYWF+
Sbjct: 145 LKNSTMLYWFA 155


>ref|XP_001760235.1| predicted protein [Physcomitrella patens]
           gi|162688615|gb|EDQ74991.1| predicted protein
           [Physcomitrella patens]
          Length = 603

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 50/148 (33%), Positives = 72/148 (48%), Gaps = 16/148 (10%)
 Frame = +1

Query: 1   ESGFCVGRCRSDCFPRVKGLCLSHSKVKYCNITEKDDEIGSPQKVADVDLQLPRCLKM-P 177
           E   C   C   CFPRV G+C+S ++V  C     DD     + +      LP  L++  
Sbjct: 97  EHYLCTNACGKVCFPRVHGMCISRTQVTIC-----DDLPYFSKDIIKAGGGLPDTLRLIT 151

Query: 178 NIMRFH-----------GERLTLPVKSEGCNMEK-KGVPGLSLVADQRYLPYKR---PNP 312
           N+ R               RL  PV + G    +   + GL +VAD + +P+ +   PNP
Sbjct: 152 NVPRDRVRVKRGTCPGWDSRLHEPVDASGGERTQGHWIRGLQMVADVKLMPHGKKVGPNP 211

Query: 313 HHEAEKIIPAILFLQHYRENNNSLYWFS 396
           HHEAEK+IPA+L    Y   N++LYWF+
Sbjct: 212 HHEAEKLIPAVLLSHLYGLRNSTLYWFA 239


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