BLASTX nr result

ID: Ephedra28_contig00024503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00024503
         (1010 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24361.1| unknown [Picea sitchensis]                              60   1e-06

>gb|ABK24361.1| unknown [Picea sitchensis]
          Length = 346

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 54/235 (22%), Positives = 103/235 (43%), Gaps = 18/235 (7%)
 Frame = -3

Query: 1008 KKNLELPKCSFTTSGEPHCLTFIATLQLNGETYVSPPASSKREAESQAANLALKHLNVDT 829
            KKN+  P   F+  GE HC TF A +++NG  Y   PA+SK++A ++AA  A++ ++   
Sbjct: 95   KKNMPPPSYKFSKEGEAHCPTFTAIVEINGAFYAGDPANSKKDATNKAACKAIRAIDPHY 154

Query: 828  LEDFPIMDSITGSRDIEQPEKGNEIQPEISQRPSEEHNAPLSLTNHQEDNVESDIKSICS 649
             +   I+++  GS   E P +  ++    S+ P++   +     N      +S + + C 
Sbjct: 155  FQAESIINN--GS---EHPTEECDVSKSDSKIPADNWTS----NNQIVGGSDSHLPANCI 205

Query: 648  NEQATTNIPSILLLTNH----------EDNVKSEIKPI-----NAGDLNNCLNEQAK--- 523
             +    N P++  ++            ED   S++K       +  ++N+  +  AK   
Sbjct: 206  EKVTVENAPAVEKVSEKRNVENPCGAGEDPENSKVKNAFGAEKSIPNINHASSVPAKHPQ 265

Query: 522  TDPPSSMQGQMLNGLGGNSQEAISSSKDAESPKSGKSGTKRTRSRIKPEIKVEDD 358
             DP  + QGQ+   +     +    S++ E  + G      T S  K  I   ++
Sbjct: 266  QDPLLARQGQLKEEIADAHPDKQHGSQEVEGKQQGSQEVDLTVSISKRSISESEN 320


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