BLASTX nr result
ID: Ephedra28_contig00024474
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00024474
(407 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK26762.1| unknown [Picea sitchensis] 79 8e-13
gb|AEW08009.1| hypothetical protein 0_16864_01, partial [Pinus r... 77 3e-12
ref|NP_001043282.1| Os01g0546500 [Oryza sativa Japonica Group] g... 69 5e-10
ref|XP_002457984.1| hypothetical protein SORBIDRAFT_03g024570 [S... 67 2e-09
ref|XP_004968912.1| PREDICTED: pentatricopeptide repeat-containi... 66 6e-09
ref|XP_004253081.1| PREDICTED: pentatricopeptide repeat-containi... 66 6e-09
ref|XP_003569175.1| PREDICTED: pentatricopeptide repeat-containi... 66 6e-09
ref|XP_006644286.1| PREDICTED: pentatricopeptide repeat-containi... 65 9e-09
gb|EPS62438.1| hypothetical protein M569_12351, partial [Genlise... 65 9e-09
ref|XP_006342489.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
dbj|BAJ93404.1| predicted protein [Hordeum vulgare subsp. vulgare] 65 1e-08
dbj|BAJ90811.1| predicted protein [Hordeum vulgare subsp. vulgare] 65 1e-08
ref|XP_006590678.1| PREDICTED: pentatricopeptide repeat-containi... 64 3e-08
ref|XP_003537572.1| PREDICTED: pentatricopeptide repeat-containi... 64 3e-08
ref|XP_006573589.1| PREDICTED: pentatricopeptide repeat-containi... 63 5e-08
ref|XP_006573588.1| PREDICTED: pentatricopeptide repeat-containi... 63 5e-08
ref|XP_003516576.2| PREDICTED: pentatricopeptide repeat-containi... 63 5e-08
gb|AFW80892.1| hypothetical protein ZEAMMB73_530785 [Zea mays] 63 5e-08
ref|NP_001183307.1| uncharacterized protein LOC100501704 [Zea ma... 63 5e-08
gb|EOX98954.1| Pentatricopeptide repeat superfamily protein, put... 62 8e-08
>gb|ABK26762.1| unknown [Picea sitchensis]
Length = 298
Score = 78.6 bits (192), Expect = 8e-13
Identities = 37/79 (46%), Positives = 51/79 (64%)
Frame = +3
Query: 3 LSDASAYSLEMFDCGWSPDPPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVE 182
L +A YSLEM D GW P+ T V +ID FC R D+AK ++ +FKEKG+ K + E
Sbjct: 213 LEEAVDYSLEMLDQGWRPNVATFVSIIDGFCKELRSDEAKAVINQFKEKGFIVDEKAVRE 272
Query: 183 FLEKHGPFHPHVRDVILGK 239
+++K GPF P V +V+ GK
Sbjct: 273 YMDKKGPFFPSVWEVMFGK 291
>gb|AEW08009.1| hypothetical protein 0_16864_01, partial [Pinus radiata]
gi|383132887|gb|AFG47335.1| hypothetical protein
0_16864_01, partial [Pinus taeda]
gi|383132889|gb|AFG47336.1| hypothetical protein
0_16864_01, partial [Pinus taeda]
gi|383132891|gb|AFG47337.1| hypothetical protein
0_16864_01, partial [Pinus taeda]
gi|383132893|gb|AFG47338.1| hypothetical protein
0_16864_01, partial [Pinus taeda]
gi|383132895|gb|AFG47339.1| hypothetical protein
0_16864_01, partial [Pinus taeda]
gi|383132897|gb|AFG47340.1| hypothetical protein
0_16864_01, partial [Pinus taeda]
gi|383132899|gb|AFG47341.1| hypothetical protein
0_16864_01, partial [Pinus taeda]
gi|383132901|gb|AFG47342.1| hypothetical protein
0_16864_01, partial [Pinus taeda]
gi|383132903|gb|AFG47343.1| hypothetical protein
0_16864_01, partial [Pinus taeda]
gi|383132905|gb|AFG47344.1| hypothetical protein
0_16864_01, partial [Pinus taeda]
gi|383132907|gb|AFG47345.1| hypothetical protein
0_16864_01, partial [Pinus taeda]
gi|383132909|gb|AFG47346.1| hypothetical protein
0_16864_01, partial [Pinus taeda]
gi|383132911|gb|AFG47347.1| hypothetical protein
0_16864_01, partial [Pinus taeda]
gi|383132913|gb|AFG47348.1| hypothetical protein
0_16864_01, partial [Pinus taeda]
gi|383132915|gb|AFG47349.1| hypothetical protein
0_16864_01, partial [Pinus taeda]
gi|383132917|gb|AFG47350.1| hypothetical protein
0_16864_01, partial [Pinus taeda]
gi|383132919|gb|AFG47351.1| hypothetical protein
0_16864_01, partial [Pinus taeda]
gi|383132921|gb|AFG47352.1| hypothetical protein
0_16864_01, partial [Pinus taeda]
Length = 129
Score = 76.6 bits (187), Expect = 3e-12
Identities = 36/79 (45%), Positives = 50/79 (63%)
Frame = +3
Query: 3 LSDASAYSLEMFDCGWSPDPPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVE 182
L +A YSLEM D GW P+ + V +ID FC R D+AK ++ +FKEKG+ K + E
Sbjct: 44 LEEAVDYSLEMLDQGWRPNVASFVSIIDGFCKELRSDEAKGVINQFKEKGFIADEKAVRE 103
Query: 183 FLEKHGPFHPHVRDVILGK 239
+++K GPF P V + I GK
Sbjct: 104 YMDKKGPFFPSVWEAIFGK 122
>ref|NP_001043282.1| Os01g0546500 [Oryza sativa Japonica Group]
gi|20146451|dbj|BAB89231.1| fertility restorer -like
protein [Oryza sativa Japonica Group]
gi|113532813|dbj|BAF05196.1| Os01g0546500 [Oryza sativa
Japonica Group] gi|215697396|dbj|BAG91390.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222618638|gb|EEE54770.1| hypothetical protein
OsJ_02158 [Oryza sativa Japonica Group]
Length = 342
Score = 69.3 bits (168), Expect = 5e-10
Identities = 34/79 (43%), Positives = 51/79 (64%)
Frame = +3
Query: 3 LSDASAYSLEMFDCGWSPDPPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVE 182
L DA A+ +EMF+ G SP+ T VGL+D C A+ ++A+KL+ F+++ + K I E
Sbjct: 257 LDDAVAFCVEMFEAGHSPNAMTFVGLVDEVCKAKGVEEAEKLVRSFQDRNFAIDEKSIRE 316
Query: 183 FLEKHGPFHPHVRDVILGK 239
L+K GPF P + +VI GK
Sbjct: 317 HLDKKGPFSPVIWEVIFGK 335
>ref|XP_002457984.1| hypothetical protein SORBIDRAFT_03g024570 [Sorghum bicolor]
gi|241929959|gb|EES03104.1| hypothetical protein
SORBIDRAFT_03g024570 [Sorghum bicolor]
Length = 322
Score = 67.4 bits (163), Expect = 2e-09
Identities = 33/79 (41%), Positives = 49/79 (62%)
Frame = +3
Query: 3 LSDASAYSLEMFDCGWSPDPPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVE 182
L DA + +EMF+ G +P+ T VGL+D+ C + DD +KL+ F+++ + K I E
Sbjct: 237 LDDAVGFCVEMFEAGLAPNAETFVGLLDAVCKTKGVDDGEKLVRSFQDRNFAIDEKSIRE 296
Query: 183 FLEKHGPFHPHVRDVILGK 239
L+K GPF P V +VI GK
Sbjct: 297 HLDKKGPFSPVVWEVIFGK 315
>ref|XP_004968912.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38150-like [Setaria italica]
Length = 326
Score = 65.9 bits (159), Expect = 6e-09
Identities = 32/79 (40%), Positives = 49/79 (62%)
Frame = +3
Query: 3 LSDASAYSLEMFDCGWSPDPPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVE 182
L DA + +EMF+ G +P+ T VGL+D+ C + D+ +KL+ F+++ + K I E
Sbjct: 241 LDDAIGFCVEMFEAGLAPNAETFVGLVDAVCKKKGVDEGEKLVRSFQDRNFAIDEKSIRE 300
Query: 183 FLEKHGPFHPHVRDVILGK 239
L+K GPF P V +VI GK
Sbjct: 301 HLDKKGPFSPVVWEVIFGK 319
>ref|XP_004253081.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38150-like isoform 1 [Solanum lycopersicum]
gi|460415472|ref|XP_004253082.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g38150-like isoform 2 [Solanum lycopersicum]
Length = 340
Score = 65.9 bits (159), Expect = 6e-09
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +3
Query: 3 LSDASAYSLEMFDCGWSPDPPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVE 182
L DA + LEM + G SP+ T V L+D FC + +DA+ ++ ++KG+ K + E
Sbjct: 253 LDDALEFCLEMLEAGHSPNVVTFVTLVDGFCKEKSLEDAQNMIKTVRQKGFIVDDKAVRE 312
Query: 183 FLEKHGPFHPHVRDVILGK 239
FL+K GPF P V + ILGK
Sbjct: 313 FLDKKGPFLPVVWEAILGK 331
>ref|XP_003569175.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38150-like [Brachypodium distachyon]
Length = 334
Score = 65.9 bits (159), Expect = 6e-09
Identities = 32/79 (40%), Positives = 50/79 (63%)
Frame = +3
Query: 3 LSDASAYSLEMFDCGWSPDPPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVE 182
L DA + +EMF+ G SP+ T VGL+D+ C ++ ++ +KL+ F+++ + K I E
Sbjct: 249 LDDAVGFCVEMFEAGHSPNAATFVGLVDAVCKSKGVEEGEKLVKSFQDRNFAIDEKSIRE 308
Query: 183 FLEKHGPFHPHVRDVILGK 239
L+K GPF P V +VI GK
Sbjct: 309 HLDKKGPFTPVVWEVIFGK 327
>ref|XP_006644286.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38150-like [Oryza brachyantha]
Length = 339
Score = 65.1 bits (157), Expect = 9e-09
Identities = 32/79 (40%), Positives = 49/79 (62%)
Frame = +3
Query: 3 LSDASAYSLEMFDCGWSPDPPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVE 182
L DA + + MF+ G SP+ T VGL+D C A+ ++A+KL+ F+++ + K I E
Sbjct: 254 LDDAVEFCVAMFEAGHSPNAMTFVGLVDGVCKAKGVEEAEKLVRSFQDRNFAIDEKSIRE 313
Query: 183 FLEKHGPFHPHVRDVILGK 239
L+K GPF P + +VI GK
Sbjct: 314 HLDKKGPFSPVIWEVIFGK 332
>gb|EPS62438.1| hypothetical protein M569_12351, partial [Genlisea aurea]
Length = 272
Score = 65.1 bits (157), Expect = 9e-09
Identities = 30/78 (38%), Positives = 48/78 (61%)
Frame = +3
Query: 3 LSDASAYSLEMFDCGWSPDPPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVE 182
L DAS ++ EM + G+SP+ T GL++ +C + ++AK L+ K+KG+ K + E
Sbjct: 186 LEDASGFTAEMLETGYSPNLATFTGLVNGWCQEKGLEEAKTLVGAMKQKGFSVEEKAVRE 245
Query: 183 FLEKHGPFHPHVRDVILG 236
+L+K GPF V + ILG
Sbjct: 246 YLDKKGPFSSPVWEAILG 263
>ref|XP_006342489.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38150-like [Solanum tuberosum]
Length = 354
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/79 (40%), Positives = 48/79 (60%)
Frame = +3
Query: 3 LSDASAYSLEMFDCGWSPDPPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVE 182
L DA + LEM + G SP+ T V L+D FC + +DA+ ++ ++KG+ K + E
Sbjct: 267 LDDAFEFCLEMLEAGHSPNVVTFVTLVDGFCKEKSLEDAQNMIKTVRQKGFIVDDKAVRE 326
Query: 183 FLEKHGPFHPHVRDVILGK 239
+L+K GPF P V + ILGK
Sbjct: 327 YLDKKGPFLPVVWEAILGK 345
>dbj|BAJ93404.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 332
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/79 (40%), Positives = 49/79 (62%)
Frame = +3
Query: 3 LSDASAYSLEMFDCGWSPDPPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVE 182
L +A A+ +EMF+ G SP+ T VGL+D+ C + ++ + L+ F+E+ + K I E
Sbjct: 247 LDEAVAFCVEMFEAGHSPNAATFVGLVDAVCKMKGVEEGENLVRSFQERNFAIDEKSIRE 306
Query: 183 FLEKHGPFHPHVRDVILGK 239
L+K GPF P V +VI GK
Sbjct: 307 HLDKKGPFSPIVWEVIFGK 325
>dbj|BAJ90811.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 332
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/79 (40%), Positives = 49/79 (62%)
Frame = +3
Query: 3 LSDASAYSLEMFDCGWSPDPPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVE 182
L +A A+ +EMF+ G SP+ T VGL+D+ C + ++ + L+ F+E+ + K I E
Sbjct: 247 LDEAVAFCVEMFEAGHSPNAATFVGLVDAVCKMKGVEEGENLVRSFQERNFAIDEKSIRE 306
Query: 183 FLEKHGPFHPHVRDVILGK 239
L+K GPF P V +VI GK
Sbjct: 307 HLDKKGPFSPIVWEVIFGK 325
>ref|XP_006590678.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38150-like isoform X2 [Glycine max]
Length = 395
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/79 (37%), Positives = 46/79 (58%)
Frame = +3
Query: 3 LSDASAYSLEMFDCGWSPDPPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVE 182
L DA + +EM + G SP+ T VGL+D FC+ + ++AK + +KG+ K + +
Sbjct: 310 LHDAFEFCVEMLEAGHSPNVTTFVGLVDGFCNEKGVEEAKSAIKTLTDKGFVVNEKAVRQ 369
Query: 183 FLEKHGPFHPHVRDVILGK 239
FL+K PF P V + I GK
Sbjct: 370 FLDKKAPFSPSVWEAIFGK 388
>ref|XP_003537572.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38150-like isoform X1 [Glycine max]
Length = 388
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/79 (37%), Positives = 46/79 (58%)
Frame = +3
Query: 3 LSDASAYSLEMFDCGWSPDPPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVE 182
L DA + +EM + G SP+ T VGL+D FC+ + ++AK + +KG+ K + +
Sbjct: 303 LHDAFEFCVEMLEAGHSPNVTTFVGLVDGFCNEKGVEEAKSAIKTLTDKGFVVNEKAVRQ 362
Query: 183 FLEKHGPFHPHVRDVILGK 239
FL+K PF P V + I GK
Sbjct: 363 FLDKKAPFSPSVWEAIFGK 381
>ref|XP_006573589.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38150-like isoform X3 [Glycine max]
gi|571435834|ref|XP_006573590.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g38150-like isoform X4 [Glycine max]
Length = 403
Score = 62.8 bits (151), Expect = 5e-08
Identities = 30/79 (37%), Positives = 45/79 (56%)
Frame = +3
Query: 3 LSDASAYSLEMFDCGWSPDPPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVE 182
L DA + +EM + G SP+ VGL+D FC+ + ++AK + EKG+ K + +
Sbjct: 318 LHDAFEFCVEMLEAGHSPNVTAFVGLVDGFCNEKGVEEAKSAIKTLTEKGFVVNEKAVGQ 377
Query: 183 FLEKHGPFHPHVRDVILGK 239
FL+K PF P V + I GK
Sbjct: 378 FLDKKAPFSPSVWEAIFGK 396
>ref|XP_006573588.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38150-like isoform X2 [Glycine max]
Length = 431
Score = 62.8 bits (151), Expect = 5e-08
Identities = 30/79 (37%), Positives = 45/79 (56%)
Frame = +3
Query: 3 LSDASAYSLEMFDCGWSPDPPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVE 182
L DA + +EM + G SP+ VGL+D FC+ + ++AK + EKG+ K + +
Sbjct: 346 LHDAFEFCVEMLEAGHSPNVTAFVGLVDGFCNEKGVEEAKSAIKTLTEKGFVVNEKAVGQ 405
Query: 183 FLEKHGPFHPHVRDVILGK 239
FL+K PF P V + I GK
Sbjct: 406 FLDKKAPFSPSVWEAIFGK 424
>ref|XP_003516576.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g38150-like isoform X1 [Glycine max]
Length = 457
Score = 62.8 bits (151), Expect = 5e-08
Identities = 30/79 (37%), Positives = 45/79 (56%)
Frame = +3
Query: 3 LSDASAYSLEMFDCGWSPDPPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVE 182
L DA + +EM + G SP+ VGL+D FC+ + ++AK + EKG+ K + +
Sbjct: 372 LHDAFEFCVEMLEAGHSPNVTAFVGLVDGFCNEKGVEEAKSAIKTLTEKGFVVNEKAVGQ 431
Query: 183 FLEKHGPFHPHVRDVILGK 239
FL+K PF P V + I GK
Sbjct: 432 FLDKKAPFSPSVWEAIFGK 450
>gb|AFW80892.1| hypothetical protein ZEAMMB73_530785 [Zea mays]
Length = 320
Score = 62.8 bits (151), Expect = 5e-08
Identities = 30/79 (37%), Positives = 48/79 (60%)
Frame = +3
Query: 3 LSDASAYSLEMFDCGWSPDPPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVE 182
L DA + +EMF+ G +P+ T VGL+D+ C + D+ + L+ F+++ + K I +
Sbjct: 235 LDDAVGFCVEMFEAGLAPNAETFVGLLDAVCKTKGVDEGENLVRSFQDRNFAIDEKSIRD 294
Query: 183 FLEKHGPFHPHVRDVILGK 239
L+K GPF P V +VI GK
Sbjct: 295 HLDKKGPFSPVVWEVIFGK 313
>ref|NP_001183307.1| uncharacterized protein LOC100501704 [Zea mays]
gi|238010656|gb|ACR36363.1| unknown [Zea mays]
Length = 178
Score = 62.8 bits (151), Expect = 5e-08
Identities = 30/79 (37%), Positives = 48/79 (60%)
Frame = +3
Query: 3 LSDASAYSLEMFDCGWSPDPPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVE 182
L DA + +EMF+ G +P+ T VGL+D+ C + D+ + L+ F+++ + K I +
Sbjct: 93 LDDAVGFCVEMFEAGLAPNAETFVGLLDAVCKTKGVDEGENLVRSFQDRNFAIDEKSIRD 152
Query: 183 FLEKHGPFHPHVRDVILGK 239
L+K GPF P V +VI GK
Sbjct: 153 HLDKKGPFSPVVWEVIFGK 171
>gb|EOX98954.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao]
Length = 345
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/79 (37%), Positives = 46/79 (58%)
Frame = +3
Query: 3 LSDASAYSLEMFDCGWSPDPPTIVGLIDSFCHAERRDDAKKLLFEFKEKGYDPRAKFIVE 182
L DA + LEM + G SP+ T VGL+D C + ++A+ ++ K+KG+ K + +
Sbjct: 260 LDDAIEFCLEMLEAGHSPNVTTFVGLVDGLCKEKGVEEAQSVIGTLKQKGFVLNDKAVRQ 319
Query: 183 FLEKHGPFHPHVRDVILGK 239
FL+K PF P V + I GK
Sbjct: 320 FLDKKAPFSPLVWEAIFGK 338