BLASTX nr result
ID: Ephedra28_contig00024353
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00024353
(386 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001770630.1| predicted protein [Physcomitrella patens] gi... 62 1e-07
ref|XP_005651206.1| ubiquitin [Coccomyxa subellipsoidea C-169] g... 62 1e-07
ref|XP_002970513.1| hypothetical protein SELMODRAFT_93613 [Selag... 61 2e-07
ref|XP_006836170.1| hypothetical protein AMTR_s00101p00053450 [A... 60 2e-07
ref|XP_001770725.1| predicted protein [Physcomitrella patens] gi... 60 2e-07
gb|ABR16104.1| unknown [Picea sitchensis] gi|224286933|gb|ACN411... 60 3e-07
ref|XP_004303424.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2... 59 5e-07
gb|EMJ03915.1| hypothetical protein PRUPE_ppa012799mg [Prunus pe... 59 5e-07
ref|XP_005850582.1| hypothetical protein CHLNCDRAFT_48528 [Chlor... 59 5e-07
ref|XP_002955196.1| polyubiquitin [Volvox carteri f. nagariensis... 59 5e-07
ref|XP_001694608.1| bi-ubiquitin [Chlamydomonas reinhardtii] gi|... 59 5e-07
ref|XP_001989219.1| GH11603 [Drosophila grimshawi] gi|193905219|... 59 7e-07
gb|ETN59309.1| polyubiquitin [Anopheles darlingi] 58 1e-06
ref|XP_002503982.1| predicted protein [Micromonas sp. RCC299] gi... 58 1e-06
ref|XP_002310680.1| Ubiquitin-related protein 2 precursor [Popul... 58 1e-06
ref|XP_002588884.1| hypothetical protein BRAFLDRAFT_284180 [Bran... 58 1e-06
ref|XP_002265864.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2... 58 1e-06
ref|XP_004294063.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2... 58 1e-06
ref|XP_004139900.1| PREDICTED: ubiquitin-NEDD8-like protein RUB1... 58 1e-06
gb|AAG31603.1| ubiquitin-like protein UBI9 [Coffea arabica] 58 1e-06
>ref|XP_001770630.1| predicted protein [Physcomitrella patens]
gi|81230136|dbj|BAE48267.1| putative polyubiquitin
[Physcomitrella patens] gi|81230138|dbj|BAE48268.1|
putative polyubiquitin [Physcomitrella patens]
gi|162678151|gb|EDQ64613.1| predicted protein
[Physcomitrella patens]
Length = 153
Score = 61.6 bits (148), Expect = 1e-07
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = -1
Query: 173 LFMLGK*MNDDKTAKDYNVEGGSVLHLVLALRGG 72
L GK MNDDKTAKDYN+EGGSVLHLVLALRGG
Sbjct: 119 LIFAGKQMNDDKTAKDYNIEGGSVLHLVLALRGG 152
>ref|XP_005651206.1| ubiquitin [Coccomyxa subellipsoidea C-169]
gi|384253187|gb|EIE26662.1| ubiquitin [Coccomyxa
subellipsoidea C-169]
Length = 77
Score = 61.6 bits (148), Expect = 1e-07
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = -1
Query: 173 LFMLGK*MNDDKTAKDYNVEGGSVLHLVLALRGG 72
L GK MNDDKTAKDYN+EGGSVLHLVLALRGG
Sbjct: 43 LIFAGKQMNDDKTAKDYNIEGGSVLHLVLALRGG 76
>ref|XP_002970513.1| hypothetical protein SELMODRAFT_93613 [Selaginella moellendorffii]
gi|302793662|ref|XP_002978596.1| hypothetical protein
SELMODRAFT_108919 [Selaginella moellendorffii]
gi|300153945|gb|EFJ20582.1| hypothetical protein
SELMODRAFT_108919 [Selaginella moellendorffii]
gi|300162029|gb|EFJ28643.1| hypothetical protein
SELMODRAFT_93613 [Selaginella moellendorffii]
Length = 108
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = -1
Query: 173 LFMLGK*MNDDKTAKDYNVEGGSVLHLVLALRGGS 69
L GK MNDDKTA+DYN+EGGSVLHLVLALRGG+
Sbjct: 70 LIFAGKQMNDDKTARDYNIEGGSVLHLVLALRGGA 104
>ref|XP_006836170.1| hypothetical protein AMTR_s00101p00053450 [Amborella trichopoda]
gi|548838670|gb|ERM99023.1| hypothetical protein
AMTR_s00101p00053450 [Amborella trichopoda]
Length = 91
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = -1
Query: 161 GK*MNDDKTAKDYNVEGGSVLHLVLALRGGSSR 63
GK MNDDKTAK+YN+EGGSVLHLVLALRGG R
Sbjct: 53 GKQMNDDKTAKEYNIEGGSVLHLVLALRGGRGR 85
>ref|XP_001770725.1| predicted protein [Physcomitrella patens]
gi|162677943|gb|EDQ64407.1| predicted protein
[Physcomitrella patens]
Length = 153
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = -1
Query: 173 LFMLGK*MNDDKTAKDYNVEGGSVLHLVLALRGG 72
L GK MNDDKTA+DYN+EGGSVLHLVLALRGG
Sbjct: 119 LIFAGKQMNDDKTARDYNIEGGSVLHLVLALRGG 152
>gb|ABR16104.1| unknown [Picea sitchensis] gi|224286933|gb|ACN41169.1| unknown
[Picea sitchensis]
Length = 153
Score = 60.1 bits (144), Expect = 3e-07
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = -1
Query: 173 LFMLGK*MNDDKTAKDYNVEGGSVLHLVLALRGG 72
L GK MNDDKTA+DYN+EGGSVLHLVLALRGG
Sbjct: 119 LIYAGKQMNDDKTARDYNIEGGSVLHLVLALRGG 152
>ref|XP_004303424.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2-like isoform 2
[Fragaria vesca subsp. vesca]
Length = 154
Score = 59.3 bits (142), Expect = 5e-07
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = -1
Query: 173 LFMLGK*MNDDKTAKDYNVEGGSVLHLVLALRGGS 69
L GK + DDKTAKDYN+EGGSVLHLVLALRGGS
Sbjct: 119 LIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGS 153
>gb|EMJ03915.1| hypothetical protein PRUPE_ppa012799mg [Prunus persica]
Length = 154
Score = 59.3 bits (142), Expect = 5e-07
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = -1
Query: 173 LFMLGK*MNDDKTAKDYNVEGGSVLHLVLALRGGS 69
L GK + DDKTAKDYN+EGGSVLHLVLALRGGS
Sbjct: 119 LIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGS 153
>ref|XP_005850582.1| hypothetical protein CHLNCDRAFT_48528 [Chlorella variabilis]
gi|307110244|gb|EFN58480.1| hypothetical protein
CHLNCDRAFT_48528 [Chlorella variabilis]
Length = 229
Score = 59.3 bits (142), Expect = 5e-07
Identities = 28/34 (82%), Positives = 29/34 (85%)
Frame = -1
Query: 173 LFMLGK*MNDDKTAKDYNVEGGSVLHLVLALRGG 72
L GK MNDDK AKDYN+EGGSVLHLVLALRGG
Sbjct: 195 LIFAGKAMNDDKMAKDYNIEGGSVLHLVLALRGG 228
>ref|XP_002955196.1| polyubiquitin [Volvox carteri f. nagariensis]
gi|300259488|gb|EFJ43715.1| polyubiquitin [Volvox
carteri f. nagariensis]
Length = 229
Score = 59.3 bits (142), Expect = 5e-07
Identities = 28/34 (82%), Positives = 29/34 (85%)
Frame = -1
Query: 173 LFMLGK*MNDDKTAKDYNVEGGSVLHLVLALRGG 72
L GK MNDDK AKDYN+EGGSVLHLVLALRGG
Sbjct: 195 LIFAGKQMNDDKQAKDYNIEGGSVLHLVLALRGG 228
>ref|XP_001694608.1| bi-ubiquitin [Chlamydomonas reinhardtii]
gi|158276832|gb|EDP02603.1| bi-ubiquitin [Chlamydomonas
reinhardtii] gi|300720946|gb|ADK33602.1| bi-ubiquitin
[Chlamydomonas reinhardtii]
Length = 153
Score = 59.3 bits (142), Expect = 5e-07
Identities = 28/34 (82%), Positives = 29/34 (85%)
Frame = -1
Query: 173 LFMLGK*MNDDKTAKDYNVEGGSVLHLVLALRGG 72
L GK MNDDK AKDYN+EGGSVLHLVLALRGG
Sbjct: 119 LIFAGKQMNDDKQAKDYNIEGGSVLHLVLALRGG 152
>ref|XP_001989219.1| GH11603 [Drosophila grimshawi] gi|193905219|gb|EDW04086.1| GH11603
[Drosophila grimshawi]
Length = 81
Score = 58.9 bits (141), Expect = 7e-07
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = -1
Query: 173 LFMLGK*MNDDKTAKDYNVEGGSVLHLVLALRGGSSRS 60
L GK MNDDKTA DY V+GGSVLHLVLALRGGS+++
Sbjct: 43 LIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGGSNKT 80
>gb|ETN59309.1| polyubiquitin [Anopheles darlingi]
Length = 81
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = -1
Query: 173 LFMLGK*MNDDKTAKDYNVEGGSVLHLVLALRGGSSRS 60
L GK MNDDKTA+DY V+GGSVLHLVLALRGG++ S
Sbjct: 43 LIFSGKQMNDDKTAQDYKVQGGSVLHLVLALRGGAAGS 80
>ref|XP_002503982.1| predicted protein [Micromonas sp. RCC299]
gi|226519249|gb|ACO65240.1| predicted protein
[Micromonas sp. RCC299]
Length = 77
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = -1
Query: 161 GK*MNDDKTAKDYNVEGGSVLHLVLALRGG 72
GK MNDDK AKDYN+EGGSVLHLVLALRGG
Sbjct: 47 GKQMNDDKIAKDYNIEGGSVLHLVLALRGG 76
>ref|XP_002310680.1| Ubiquitin-related protein 2 precursor [Populus trichocarpa]
gi|222853583|gb|EEE91130.1| Ubiquitin-related protein 2
precursor [Populus trichocarpa]
Length = 149
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = -1
Query: 173 LFMLGK*MNDDKTAKDYNVEGGSVLHLVLALRGGS 69
L GK + DDKTA+DYN+EGGSVLHLVLALRGGS
Sbjct: 114 LIYAGKQLGDDKTARDYNIEGGSVLHLVLALRGGS 148
>ref|XP_002588884.1| hypothetical protein BRAFLDRAFT_284180 [Branchiostoma floridae]
gi|229274055|gb|EEN44895.1| hypothetical protein
BRAFLDRAFT_284180 [Branchiostoma floridae]
Length = 77
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/40 (72%), Positives = 30/40 (75%)
Frame = -1
Query: 191 PHPITGLFMLGK*MNDDKTAKDYNVEGGSVLHLVLALRGG 72
P P L GK MNDDKTA DY V+GGSVLHLVLALRGG
Sbjct: 37 PPPQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGG 76
>ref|XP_002265864.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2 [Vitis vinifera]
gi|297736166|emb|CBI24204.3| unnamed protein product
[Vitis vinifera]
Length = 155
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = -1
Query: 173 LFMLGK*MNDDKTAKDYNVEGGSVLHLVLALRGGSS 66
L GK + DDKTA+DYN+EGGSVLHLVLALRGG S
Sbjct: 119 LIYAGKQLGDDKTARDYNIEGGSVLHLVLALRGGGS 154
>ref|XP_004294063.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2-like [Fragaria vesca
subsp. vesca]
Length = 154
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = -1
Query: 173 LFMLGK*MNDDKTAKDYNVEGGSVLHLVLALRGGS 69
L GK + DDKTAK+YN+EGGSVLHLVLALRGGS
Sbjct: 119 LIYAGKQLGDDKTAKEYNIEGGSVLHLVLALRGGS 153
>ref|XP_004139900.1| PREDICTED: ubiquitin-NEDD8-like protein RUB1-like [Cucumis sativus]
gi|449532435|ref|XP_004173186.1| PREDICTED:
ubiquitin-NEDD8-like protein RUB1-like [Cucumis sativus]
Length = 154
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = -1
Query: 173 LFMLGK*MNDDKTAKDYNVEGGSVLHLVLALRGG 72
L GK + DDKTAKDYN+EGGSVLHLVLALRGG
Sbjct: 119 LIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG 152
>gb|AAG31603.1| ubiquitin-like protein UBI9 [Coffea arabica]
Length = 51
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = -1
Query: 173 LFMLGK*MNDDKTAKDYNVEGGSVLHLVLALRGG 72
L GK + DDKTAKDYN+EGGSVLHLVLALRGG
Sbjct: 16 LIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG 49