BLASTX nr result

ID: Ephedra28_contig00024241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00024241
         (734 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEW07905.1| hypothetical protein 0_14083_01, partial [Pinus r...    65   3e-08

>gb|AEW07905.1| hypothetical protein 0_14083_01, partial [Pinus radiata]
           gi|383132654|gb|AFG47217.1| hypothetical protein
           0_14083_01, partial [Pinus taeda]
           gi|383132656|gb|AFG47218.1| hypothetical protein
           0_14083_01, partial [Pinus taeda]
           gi|383132658|gb|AFG47219.1| hypothetical protein
           0_14083_01, partial [Pinus taeda]
           gi|383132660|gb|AFG47220.1| hypothetical protein
           0_14083_01, partial [Pinus taeda]
           gi|383132662|gb|AFG47221.1| hypothetical protein
           0_14083_01, partial [Pinus taeda]
           gi|383132664|gb|AFG47222.1| hypothetical protein
           0_14083_01, partial [Pinus taeda]
           gi|383132666|gb|AFG47223.1| hypothetical protein
           0_14083_01, partial [Pinus taeda]
           gi|383132668|gb|AFG47224.1| hypothetical protein
           0_14083_01, partial [Pinus taeda]
           gi|383132670|gb|AFG47225.1| hypothetical protein
           0_14083_01, partial [Pinus taeda]
           gi|383132672|gb|AFG47226.1| hypothetical protein
           0_14083_01, partial [Pinus taeda]
           gi|383132674|gb|AFG47227.1| hypothetical protein
           0_14083_01, partial [Pinus taeda]
           gi|383132676|gb|AFG47228.1| hypothetical protein
           0_14083_01, partial [Pinus taeda]
           gi|383132678|gb|AFG47229.1| hypothetical protein
           0_14083_01, partial [Pinus taeda]
           gi|383132680|gb|AFG47230.1| hypothetical protein
           0_14083_01, partial [Pinus taeda]
          Length = 146

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 1/117 (0%)
 Frame = -1

Query: 437 DGSTLYADNLVLSSRSXXXXXXXXXXXXXKN-TRKVTIDDVKTETVLDFLFFLYEHKLRE 261
           DGS L+A  L+L +RS             +  TR+V I +V  E++  FL FLY  +L  
Sbjct: 22  DGSQLFAHGLILVNRSEVFRKMLEEVDLKEKETREVVIQEVGGESLKTFLKFLYTAQLNS 81

Query: 260 VPSGEGRKELLQLAHRFDVKELVHFLDGCIVHELVKTPSDLELLKMGFIYHLPKTKE 90
                  +EL++LAH + VK L+  LD  I  E+V   + +E+LKM ++Y L  T+E
Sbjct: 82  EEMHAKYRELVKLAHFYQVKLLLMKLDNFISSEIVSKNACIEILKMAYLYDLETTRE 138


Top