BLASTX nr result
ID: Ephedra28_contig00024197
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00024197
(514 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADE77582.1| unknown [Picea sitchensis] 74 2e-11
ref|XP_006646811.1| PREDICTED: probable dimethyladenosine transf... 70 2e-10
emb|CAZ96067.1| dimethyladenosine transferase [Saccharum hybrid ... 69 5e-10
emb|CAZ96033.1| dimethyladenosine transferase [Sorghum bicolor] 69 5e-10
ref|XP_003573655.1| PREDICTED: ribosomal RNA small subunit methy... 69 6e-10
ref|XP_004952065.1| PREDICTED: dimethyladenosine transferase 1, ... 68 1e-09
ref|XP_003552364.1| PREDICTED: probable dimethyladenosine transf... 68 1e-09
ref|XP_003534590.1| PREDICTED: probable dimethyladenosine transf... 68 1e-09
gb|AFW66605.1| dimethyladenosine transferase [Zea mays] 67 2e-09
ref|NP_001151385.1| LOC100285018 [Zea mays] gi|195646350|gb|ACG4... 67 2e-09
gb|ESW11920.1| hypothetical protein PHAVU_008G070300g [Phaseolus... 67 3e-09
ref|XP_003623846.1| Ribosomal RNA small subunit methyltransferas... 66 4e-09
emb|CAZ96099.1| dimethyladenosine transferase [Saccharum hybrid ... 66 5e-09
ref|XP_002511789.1| dimethyladenosine transferase, putative [Ric... 65 9e-09
gb|EMS59674.1| Ribosomal RNA small subunit methyltransferase A [... 65 1e-08
ref|XP_004306848.1| PREDICTED: ribosomal RNA small subunit methy... 65 1e-08
ref|XP_004492688.1| PREDICTED: ribosomal RNA small subunit methy... 64 2e-08
ref|XP_002270274.1| PREDICTED: ribosomal RNA small subunit methy... 64 2e-08
ref|XP_006305307.1| hypothetical protein CARUB_v10009683mg [Caps... 64 3e-08
gb|AAF78414.1|AC009273_20 Identical to dimethyladenosine transfe... 63 3e-08
>gb|ADE77582.1| unknown [Picea sitchensis]
Length = 351
Score = 74.3 bits (181), Expect = 2e-11
Identities = 37/60 (61%), Positives = 45/60 (75%)
Frame = +1
Query: 1 SMVNSAFSEKRKMLRNSLQHHFATSAIEEALTKLGLPQTARPGDLHTDRFIELYSMLTRQ 180
SMVNSAF+ KRKMLR SLQH A+ IE AL LGLP+T+RPG+L D F+ LY++L Q
Sbjct: 292 SMVNSAFNGKRKMLRKSLQHLCASRDIESALRTLGLPETSRPGELEMDDFVRLYNLLNSQ 351
>ref|XP_006646811.1| PREDICTED: probable dimethyladenosine transferase-like [Oryza
brachyantha]
Length = 341
Score = 70.5 bits (171), Expect = 2e-10
Identities = 36/59 (61%), Positives = 44/59 (74%)
Frame = +1
Query: 1 SMVNSAFSEKRKMLRNSLQHHFATSAIEEALTKLGLPQTARPGDLHTDRFIELYSMLTR 177
SMVNSAF+ KRKMLR SLQH ++S IE ALT +GLP TARP DL D F+ L++ L +
Sbjct: 282 SMVNSAFNGKRKMLRKSLQHLCSSSEIEAALTSIGLPVTARPSDLVLDDFVRLHNHLAK 340
>emb|CAZ96067.1| dimethyladenosine transferase [Saccharum hybrid cultivar R570]
Length = 319
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/59 (61%), Positives = 43/59 (72%)
Frame = +1
Query: 1 SMVNSAFSEKRKMLRNSLQHHFATSAIEEALTKLGLPQTARPGDLHTDRFIELYSMLTR 177
SMVNSAF KRKMLR SLQH ++S IE AL +GLP TARP DL D F+ L++ LT+
Sbjct: 260 SMVNSAFMGKRKMLRKSLQHLCSSSEIEAALDNIGLPVTARPSDLILDDFVRLHNHLTK 318
>emb|CAZ96033.1| dimethyladenosine transferase [Sorghum bicolor]
Length = 343
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/59 (61%), Positives = 43/59 (72%)
Frame = +1
Query: 1 SMVNSAFSEKRKMLRNSLQHHFATSAIEEALTKLGLPQTARPGDLHTDRFIELYSMLTR 177
SMVNSAF KRKMLR SLQH ++S IE AL +GLP TARP DL D F+ L++ LT+
Sbjct: 284 SMVNSAFMGKRKMLRKSLQHLCSSSEIEAALDNIGLPVTARPSDLILDDFVRLHNHLTK 342
>ref|XP_003573655.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
[Brachypodium distachyon]
Length = 344
Score = 68.9 bits (167), Expect = 6e-10
Identities = 34/59 (57%), Positives = 44/59 (74%)
Frame = +1
Query: 1 SMVNSAFSEKRKMLRNSLQHHFATSAIEEALTKLGLPQTARPGDLHTDRFIELYSMLTR 177
SMVNSAF+ KRKMLR SLQH +++ IE AL+ +GLP TARP DL D F+ L++ L +
Sbjct: 285 SMVNSAFNGKRKMLRKSLQHLCSSAEIEAALSNIGLPATARPSDLMMDDFVRLHNRLAK 343
>ref|XP_004952065.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial-like
isoform X1 [Setaria italica]
gi|514710577|ref|XP_004952066.1| PREDICTED:
dimethyladenosine transferase 1, mitochondrial-like
isoform X2 [Setaria italica]
Length = 342
Score = 68.2 bits (165), Expect = 1e-09
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = +1
Query: 1 SMVNSAFSEKRKMLRNSLQHHFATSAIEEALTKLGLPQTARPGDLHTDRFIELYSML 171
SMVNSAF+ KRKMLR SLQH ++S IE AL LGLP TARP DL D F+ L++ L
Sbjct: 283 SMVNSAFNGKRKMLRKSLQHLCSSSEIEAALHNLGLPVTARPSDLTLDDFVRLHNHL 339
>ref|XP_003552364.1| PREDICTED: probable dimethyladenosine transferase-like [Glycine
max]
Length = 341
Score = 68.2 bits (165), Expect = 1e-09
Identities = 33/60 (55%), Positives = 46/60 (76%)
Frame = +1
Query: 1 SMVNSAFSEKRKMLRNSLQHHFATSAIEEALTKLGLPQTARPGDLHTDRFIELYSMLTRQ 180
SMVNSAF+EKRKMLR SLQH + IEEALT +GL T+RP +L D F++L++++ ++
Sbjct: 282 SMVNSAFNEKRKMLRKSLQHICTSLEIEEALTSIGLLATSRPEELTLDDFVKLHNLIAKE 341
>ref|XP_003534590.1| PREDICTED: probable dimethyladenosine transferase-like [Glycine
max]
Length = 341
Score = 68.2 bits (165), Expect = 1e-09
Identities = 33/60 (55%), Positives = 46/60 (76%)
Frame = +1
Query: 1 SMVNSAFSEKRKMLRNSLQHHFATSAIEEALTKLGLPQTARPGDLHTDRFIELYSMLTRQ 180
SMVNSAF+EKRKMLR SLQH + IEEALT +GL T+RP +L D F++L++++ ++
Sbjct: 282 SMVNSAFNEKRKMLRKSLQHICTSLEIEEALTSIGLLATSRPEELTLDDFVKLHNLIAKE 341
>gb|AFW66605.1| dimethyladenosine transferase [Zea mays]
Length = 338
Score = 67.4 bits (163), Expect = 2e-09
Identities = 35/59 (59%), Positives = 42/59 (71%)
Frame = +1
Query: 1 SMVNSAFSEKRKMLRNSLQHHFATSAIEEALTKLGLPQTARPGDLHTDRFIELYSMLTR 177
SMVNSAF KRKMLR SLQH ++S IE AL +GLP TARP DL D F+ L++ L +
Sbjct: 279 SMVNSAFMGKRKMLRKSLQHICSSSEIEAALDNIGLPVTARPSDLILDDFVRLHNHLAK 337
>ref|NP_001151385.1| LOC100285018 [Zea mays] gi|195646350|gb|ACG42643.1|
dimethyladenosine transferase [Zea mays]
Length = 337
Score = 67.0 bits (162), Expect = 2e-09
Identities = 35/59 (59%), Positives = 42/59 (71%)
Frame = +1
Query: 1 SMVNSAFSEKRKMLRNSLQHHFATSAIEEALTKLGLPQTARPGDLHTDRFIELYSMLTR 177
SMVNSAF KRKMLR SLQH ++S IE AL +GLP TARP DL D F+ L++ L +
Sbjct: 278 SMVNSAFMGKRKMLRKSLQHICSSSDIEAALDNIGLPVTARPSDLILDDFVRLHNHLAK 336
>gb|ESW11920.1| hypothetical protein PHAVU_008G070300g [Phaseolus vulgaris]
Length = 342
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/60 (55%), Positives = 44/60 (73%)
Frame = +1
Query: 1 SMVNSAFSEKRKMLRNSLQHHFATSAIEEALTKLGLPQTARPGDLHTDRFIELYSMLTRQ 180
S VNSAF+EKRKMLR SLQH IEEALT +GL T+RP +L D F++L++M+ ++
Sbjct: 283 STVNSAFNEKRKMLRKSLQHICTALEIEEALTSIGLLATSRPEELTLDDFVKLHNMIAKE 342
>ref|XP_003623846.1| Ribosomal RNA small subunit methyltransferase A [Medicago
truncatula] gi|124360236|gb|ABN08249.1| SAM (and some
other nucleotide) binding motif [Medicago truncatula]
gi|124360864|gb|ABN08836.1| SAM (and some other
nucleotide) binding motif [Medicago truncatula]
gi|355498861|gb|AES80064.1| Ribosomal RNA small subunit
methyltransferase A [Medicago truncatula]
Length = 349
Score = 66.2 bits (160), Expect = 4e-09
Identities = 32/60 (53%), Positives = 45/60 (75%)
Frame = +1
Query: 1 SMVNSAFSEKRKMLRNSLQHHFATSAIEEALTKLGLPQTARPGDLHTDRFIELYSMLTRQ 180
SMVNSAF+EKRKM+R SLQH + IEEAL +GL T+RP +L D F++L++ +T++
Sbjct: 290 SMVNSAFNEKRKMIRKSLQHICTSLEIEEALESIGLLSTSRPEELTLDDFVKLHNSITKE 349
>emb|CAZ96099.1| dimethyladenosine transferase [Saccharum hybrid cultivar R570]
Length = 333
Score = 65.9 bits (159), Expect = 5e-09
Identities = 34/57 (59%), Positives = 41/57 (71%)
Frame = +1
Query: 7 VNSAFSEKRKMLRNSLQHHFATSAIEEALTKLGLPQTARPGDLHTDRFIELYSMLTR 177
VNSAF KRKMLR SLQH ++S IE AL +GLP TARP DL D F+ L++ LT+
Sbjct: 276 VNSAFMGKRKMLRKSLQHLCSSSEIESALGNIGLPVTARPSDLILDDFVRLHNHLTK 332
>ref|XP_002511789.1| dimethyladenosine transferase, putative [Ricinus communis]
gi|223548969|gb|EEF50458.1| dimethyladenosine
transferase, putative [Ricinus communis]
Length = 338
Score = 65.1 bits (157), Expect = 9e-09
Identities = 31/59 (52%), Positives = 44/59 (74%)
Frame = +1
Query: 1 SMVNSAFSEKRKMLRNSLQHHFATSAIEEALTKLGLPQTARPGDLHTDRFIELYSMLTR 177
S+VNSAF+ KRKMLR SLQH + IE+AL +GLP T+RP +L D F++L++++ R
Sbjct: 279 SLVNSAFNGKRKMLRRSLQHICTSPEIEQALINVGLPATSRPEELTLDDFVKLHNLIAR 337
>gb|EMS59674.1| Ribosomal RNA small subunit methyltransferase A [Triticum urartu]
Length = 338
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/57 (57%), Positives = 42/57 (73%)
Frame = +1
Query: 1 SMVNSAFSEKRKMLRNSLQHHFATSAIEEALTKLGLPQTARPGDLHTDRFIELYSML 171
SMVNSAF+ KRKMLR SLQH +++ IE ALT + LP TARP +L D F+ L++ L
Sbjct: 259 SMVNSAFNGKRKMLRKSLQHLCSSADIEAALTNIDLPPTARPSELGMDDFVRLHNHL 315
>ref|XP_004306848.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
[Fragaria vesca subsp. vesca]
Length = 350
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/60 (53%), Positives = 43/60 (71%)
Frame = +1
Query: 1 SMVNSAFSEKRKMLRNSLQHHFATSAIEEALTKLGLPQTARPGDLHTDRFIELYSMLTRQ 180
SMVNSAF+ KRKMLR SLQH S IE AL +G P T+RP +L T+ F++L++M+ +
Sbjct: 291 SMVNSAFNGKRKMLRKSLQHICTPSEIESALENVGRPATSRPEELTTEDFVKLHNMIVTE 350
>ref|XP_004492688.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
[Cicer arietinum]
Length = 348
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/60 (50%), Positives = 46/60 (76%)
Frame = +1
Query: 1 SMVNSAFSEKRKMLRNSLQHHFATSAIEEALTKLGLPQTARPGDLHTDRFIELYSMLTRQ 180
+MV+SAF+EKRKM+R SLQH + IEEAL +GL T+RP +L D F++L++++T++
Sbjct: 289 AMVHSAFNEKRKMIRKSLQHICTSLEIEEALESIGLLSTSRPEELTLDDFVKLHNLITKE 348
>ref|XP_002270274.1| PREDICTED: ribosomal RNA small subunit methyltransferase A [Vitis
vinifera] gi|296089082|emb|CBI38785.3| unnamed protein
product [Vitis vinifera]
Length = 335
Score = 64.3 bits (155), Expect = 2e-08
Identities = 31/59 (52%), Positives = 43/59 (72%)
Frame = +1
Query: 1 SMVNSAFSEKRKMLRNSLQHHFATSAIEEALTKLGLPQTARPGDLHTDRFIELYSMLTR 177
S+VNSAF+ KRKMLR SLQH + IEEAL +GLP T+RP +L D F+ L++++ +
Sbjct: 276 SLVNSAFNGKRKMLRRSLQHICTSIEIEEALRNVGLPATSRPEELTLDDFVRLHNLIVK 334
>ref|XP_006305307.1| hypothetical protein CARUB_v10009683mg [Capsella rubella]
gi|482574018|gb|EOA38205.1| hypothetical protein
CARUB_v10009683mg [Capsella rubella]
Length = 335
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/60 (51%), Positives = 46/60 (76%)
Frame = +1
Query: 1 SMVNSAFSEKRKMLRNSLQHHFATSAIEEALTKLGLPQTARPGDLHTDRFIELYSMLTRQ 180
S+VNSAF+ KRKMLR SLQH ++ IE+AL +GLP T+RP +L D F++L++++ R+
Sbjct: 276 SLVNSAFNGKRKMLRKSLQHISSSPDIEKALGVVGLPVTSRPEELTLDDFVKLHNVIARE 335
>gb|AAF78414.1|AC009273_20 Identical to dimethyladenosine transferase from Arabidopsis
thaliana gb|AF051326. It contains ribosomal RNA adenine
dimethylases PF|00398. This gene is cut off, partial
[Arabidopsis thaliana]
Length = 87
Score = 63.2 bits (152), Expect = 3e-08
Identities = 31/60 (51%), Positives = 45/60 (75%)
Frame = +1
Query: 1 SMVNSAFSEKRKMLRNSLQHHFATSAIEEALTKLGLPQTARPGDLHTDRFIELYSMLTRQ 180
S+VNSAF+ KRKMLR SLQH ++ IE+AL GLP T+RP +L D F++L++++ R+
Sbjct: 28 SLVNSAFNGKRKMLRKSLQHISSSPDIEKALGVAGLPATSRPEELTLDDFVKLHNVIARE 87