BLASTX nr result
ID: Ephedra28_contig00024168
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00024168
(408 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q43794.1|SYE_TOBAC RecName: Full=Glutamate--tRNA ligase, chlo... 62 6e-08
ref|XP_003521020.1| PREDICTED: glutamate--tRNA ligase, chloropla... 61 2e-07
ref|XP_002313571.2| hypothetical protein POPTR_0009s17070g [Popu... 60 3e-07
ref|XP_006394210.1| hypothetical protein EUTSA_v10003868mg [Eutr... 60 4e-07
ref|XP_006394208.1| hypothetical protein EUTSA_v10003868mg [Eutr... 60 4e-07
ref|XP_006281785.1| hypothetical protein CARUB_v10027955mg [Caps... 60 4e-07
ref|XP_004290586.1| PREDICTED: glutamate--tRNA ligase, chloropla... 60 4e-07
ref|NP_201210.1| glutamyl-tRNA synthetase [Arabidopsis thaliana]... 60 4e-07
ref|XP_003529003.1| PREDICTED: glutamate--tRNA ligase, chloropla... 60 4e-07
ref|XP_002866589.1| ATERS/ERS/OVA3 [Arabidopsis lyrata subsp. ly... 60 4e-07
gb|ACU19039.1| unknown [Glycine max] 60 4e-07
ref|XP_004231106.1| PREDICTED: glutamate--tRNA ligase, chloropla... 59 5e-07
gb|AAY18610.1| glutamyl-tRNA synthetase [Nicotiana benthamiana] 59 7e-07
ref|XP_006486589.1| PREDICTED: glutamate--tRNA ligase, chloropla... 59 9e-07
ref|XP_006422417.1| hypothetical protein CICLE_v10028098mg [Citr... 59 9e-07
ref|XP_004510174.1| PREDICTED: glutamate--tRNA ligase, chloropla... 59 9e-07
ref|XP_002532486.1| glutamyl-tRNA synthetase 1, 2, putative [Ric... 59 9e-07
gb|EPS57601.1| hypothetical protein M569_17216, partial [Genlise... 58 1e-06
gb|AAL06875.1| AT5g64050/MHJ24_3 [Arabidopsis thaliana] gi|17064... 58 1e-06
ref|XP_006364338.1| PREDICTED: glutamate--tRNA ligase, chloropla... 57 3e-06
>sp|Q43794.1|SYE_TOBAC RecName: Full=Glutamate--tRNA ligase, chloroplastic/mitochondrial;
AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS;
Flags: Precursor gi|603867|emb|CAA58506.1|
glutamate--tRNA ligase [Nicotiana tabacum]
Length = 569
Score = 62.4 bits (150), Expect = 6e-08
Identities = 36/67 (53%), Positives = 43/67 (64%)
Frame = +2
Query: 206 LRKSNTLINCISIPNTYNNSCTTSLRISRRNKTSIACSYSPNDVRVRFAPSPTGNLHVGG 385
L+ S +L+ C N+S SL RR+ + A + DVRVRFAPSPTGNLHVGG
Sbjct: 18 LKNSQSLLYCRG-----NHSYRQSLCSRRRSFSVYASAGDGGDVRVRFAPSPTGNLHVGG 72
Query: 386 ARTALFN 406
ARTALFN
Sbjct: 73 ARTALFN 79
>ref|XP_003521020.1| PREDICTED: glutamate--tRNA ligase, chloroplastic/mitochondrial-like
[Glycine max]
Length = 559
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = +2
Query: 236 ISIPNTYNNSCTTSLRISRRNKTSI-ACSYSPNDVRVRFAPSPTGNLHVGGARTALFN 406
+ +P +++S T +R + S+ A S P VRVRFAPSPTGNLHVGGARTALFN
Sbjct: 13 VIVPPIFHHSHTPRTFFFQRRRFSVSALSEQPPPVRVRFAPSPTGNLHVGGARTALFN 70
>ref|XP_002313571.2| hypothetical protein POPTR_0009s17070g [Populus trichocarpa]
gi|550331900|gb|EEE87526.2| hypothetical protein
POPTR_0009s17070g [Populus trichocarpa]
Length = 574
Score = 60.1 bits (144), Expect = 3e-07
Identities = 35/68 (51%), Positives = 39/68 (57%)
Frame = +2
Query: 203 ILRKSNTLINCISIPNTYNNSCTTSLRISRRNKTSIACSYSPNDVRVRFAPSPTGNLHVG 382
ILR S++L YN+ + RR S S VRVRFAPSPTGNLHVG
Sbjct: 24 ILRSSSSL---------YNHKVSFLFPTRRRFSVSAIASTEKEQVRVRFAPSPTGNLHVG 74
Query: 383 GARTALFN 406
GARTALFN
Sbjct: 75 GARTALFN 82
>ref|XP_006394210.1| hypothetical protein EUTSA_v10003868mg [Eutrema salsugineum]
gi|557090849|gb|ESQ31496.1| hypothetical protein
EUTSA_v10003868mg [Eutrema salsugineum]
Length = 597
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/49 (63%), Positives = 37/49 (75%), Gaps = 3/49 (6%)
Frame = +2
Query: 269 TTSLRISRRNKTSIACSYSPND---VRVRFAPSPTGNLHVGGARTALFN 406
++S SRR+ +AC + N+ VRVRFAPSPTGNLHVGGARTALFN
Sbjct: 29 SSSFYCSRRSFAVVACFSASNNGGSVRVRFAPSPTGNLHVGGARTALFN 77
>ref|XP_006394208.1| hypothetical protein EUTSA_v10003868mg [Eutrema salsugineum]
gi|567137409|ref|XP_006394209.1| hypothetical protein
EUTSA_v10003868mg [Eutrema salsugineum]
gi|557090847|gb|ESQ31494.1| hypothetical protein
EUTSA_v10003868mg [Eutrema salsugineum]
gi|557090848|gb|ESQ31495.1| hypothetical protein
EUTSA_v10003868mg [Eutrema salsugineum]
Length = 570
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/49 (63%), Positives = 37/49 (75%), Gaps = 3/49 (6%)
Frame = +2
Query: 269 TTSLRISRRNKTSIACSYSPND---VRVRFAPSPTGNLHVGGARTALFN 406
++S SRR+ +AC + N+ VRVRFAPSPTGNLHVGGARTALFN
Sbjct: 29 SSSFYCSRRSFAVVACFSASNNGGSVRVRFAPSPTGNLHVGGARTALFN 77
>ref|XP_006281785.1| hypothetical protein CARUB_v10027955mg [Capsella rubella]
gi|482550489|gb|EOA14683.1| hypothetical protein
CARUB_v10027955mg [Capsella rubella]
Length = 570
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/43 (72%), Positives = 34/43 (79%), Gaps = 3/43 (6%)
Frame = +2
Query: 287 SRRNKTSIACSYSPND---VRVRFAPSPTGNLHVGGARTALFN 406
SRR+ +ACS N+ VRVRFAPSPTGNLHVGGARTALFN
Sbjct: 35 SRRSFAVVACSSPGNNGGSVRVRFAPSPTGNLHVGGARTALFN 77
>ref|XP_004290586.1| PREDICTED: glutamate--tRNA ligase, chloroplastic/mitochondrial-like
[Fragaria vesca subsp. vesca]
Length = 565
Score = 59.7 bits (143), Expect = 4e-07
Identities = 33/53 (62%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = +2
Query: 251 TYNNSCTTSLRISRRNKTSIACSYSPND-VRVRFAPSPTGNLHVGGARTALFN 406
+Y T SL ++ S++ S SP D VRVRFAPSPTGNLHVGGARTALFN
Sbjct: 24 SYRGPRTISL-FNKARTFSVSASSSPQDHVRVRFAPSPTGNLHVGGARTALFN 75
>ref|NP_201210.1| glutamyl-tRNA synthetase [Arabidopsis thaliana]
gi|30316183|sp|Q9FEA2.1|SYE_ARATH RecName:
Full=Glutamate--tRNA ligase,
chloroplastic/mitochondrial; AltName: Full=Glutamyl-tRNA
synthetase; Short=GluRS; Flags: Precursor
gi|11078546|gb|AAG29098.1|AF241841_1 Glu-tRNA synthetase
[Arabidopsis thaliana] gi|10176953|dbj|BAB10273.1|
glutamate-tRNA ligase [Arabidopsis thaliana]
gi|332010451|gb|AED97834.1| glutamyl-tRNA synthetase
[Arabidopsis thaliana]
Length = 570
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/43 (72%), Positives = 34/43 (79%), Gaps = 3/43 (6%)
Frame = +2
Query: 287 SRRNKTSIACSYSPND---VRVRFAPSPTGNLHVGGARTALFN 406
SRR+ +ACS N+ VRVRFAPSPTGNLHVGGARTALFN
Sbjct: 35 SRRSFAVVACSTPVNNGGSVRVRFAPSPTGNLHVGGARTALFN 77
>ref|XP_003529003.1| PREDICTED: glutamate--tRNA ligase, chloroplastic/mitochondrial-like
[Glycine max]
Length = 562
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 4/61 (6%)
Frame = +2
Query: 236 ISIPNTYNNSCTTSLRISRRNKTSIACSYS----PNDVRVRFAPSPTGNLHVGGARTALF 403
++I +++S T +R + S++ ++S P VRVRFAPSPTGNLHVGGARTALF
Sbjct: 13 VTISPIFHHSHTPRTFFFQRRRFSVSAAFSEQQPPPPVRVRFAPSPTGNLHVGGARTALF 72
Query: 404 N 406
N
Sbjct: 73 N 73
>ref|XP_002866589.1| ATERS/ERS/OVA3 [Arabidopsis lyrata subsp. lyrata]
gi|297312424|gb|EFH42848.1| ATERS/ERS/OVA3 [Arabidopsis
lyrata subsp. lyrata]
Length = 570
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/43 (72%), Positives = 34/43 (79%), Gaps = 3/43 (6%)
Frame = +2
Query: 287 SRRNKTSIACSYSPND---VRVRFAPSPTGNLHVGGARTALFN 406
SRR+ +ACS N+ VRVRFAPSPTGNLHVGGARTALFN
Sbjct: 35 SRRSFAVVACSSPVNNGGSVRVRFAPSPTGNLHVGGARTALFN 77
>gb|ACU19039.1| unknown [Glycine max]
Length = 265
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 4/61 (6%)
Frame = +2
Query: 236 ISIPNTYNNSCTTSLRISRRNKTSIACSYS----PNDVRVRFAPSPTGNLHVGGARTALF 403
++I +++S T +R + S++ ++S P VRVRFAPSPTGNLHVGGARTALF
Sbjct: 13 VTISPIFHHSHTPRTFFFQRRRFSVSAAFSEQQPPPPVRVRFAPSPTGNLHVGGARTALF 72
Query: 404 N 406
N
Sbjct: 73 N 73
>ref|XP_004231106.1| PREDICTED: glutamate--tRNA ligase, chloroplastic/mitochondrial-like
[Solanum lycopersicum]
Length = 570
Score = 59.3 bits (142), Expect = 5e-07
Identities = 34/67 (50%), Positives = 41/67 (61%)
Frame = +2
Query: 206 LRKSNTLINCISIPNTYNNSCTTSLRISRRNKTSIACSYSPNDVRVRFAPSPTGNLHVGG 385
L+ +L+ C + P Y S L RR+ + A + VRVRFAPSPTGNLHVGG
Sbjct: 18 LKSRQSLLYCRNGPRRYPQS----LCFRRRSFSIYASAGDEGAVRVRFAPSPTGNLHVGG 73
Query: 386 ARTALFN 406
ARTALFN
Sbjct: 74 ARTALFN 80
>gb|AAY18610.1| glutamyl-tRNA synthetase [Nicotiana benthamiana]
Length = 569
Score = 58.9 bits (141), Expect = 7e-07
Identities = 32/67 (47%), Positives = 43/67 (64%)
Frame = +2
Query: 206 LRKSNTLINCISIPNTYNNSCTTSLRISRRNKTSIACSYSPNDVRVRFAPSPTGNLHVGG 385
L+ +L+ C + + + C+ RR+ + A + + DVRVRFAPSPTGNLHVGG
Sbjct: 18 LKNRQSLLYCRGDHSYWQSLCSR-----RRSFSVYASAGNGGDVRVRFAPSPTGNLHVGG 72
Query: 386 ARTALFN 406
ARTALFN
Sbjct: 73 ARTALFN 79
>ref|XP_006486589.1| PREDICTED: glutamate--tRNA ligase, chloroplastic/mitochondrial-like
[Citrus sinensis]
Length = 571
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/51 (60%), Positives = 36/51 (70%), Gaps = 6/51 (11%)
Frame = +2
Query: 272 TSLRISRRNKTSIACSYSPN------DVRVRFAPSPTGNLHVGGARTALFN 406
+S+ +R + S+A S S N VRVRFAPSPTGNLHVGGARTALFN
Sbjct: 29 SSVYYCKRRRFSVAASLSTNTNKVDGQVRVRFAPSPTGNLHVGGARTALFN 79
>ref|XP_006422417.1| hypothetical protein CICLE_v10028098mg [Citrus clementina]
gi|557524351|gb|ESR35657.1| hypothetical protein
CICLE_v10028098mg [Citrus clementina]
Length = 571
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/51 (60%), Positives = 36/51 (70%), Gaps = 6/51 (11%)
Frame = +2
Query: 272 TSLRISRRNKTSIACSYSPN------DVRVRFAPSPTGNLHVGGARTALFN 406
+S+ +R + S+A S S N VRVRFAPSPTGNLHVGGARTALFN
Sbjct: 29 SSVYYCKRRRFSVAASLSTNTNKVDGQVRVRFAPSPTGNLHVGGARTALFN 79
>ref|XP_004510174.1| PREDICTED: glutamate--tRNA ligase, chloroplastic/mitochondrial-like
[Cicer arietinum]
Length = 565
Score = 58.5 bits (140), Expect = 9e-07
Identities = 33/57 (57%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +2
Query: 239 SIPNTYNNSCTTSLRISRRNKTSI-ACSYSPNDVRVRFAPSPTGNLHVGGARTALFN 406
+ P+ + + TS S R K S+ A S VRVRFAPSPTGNLHVGGARTALFN
Sbjct: 20 AFPSLHQSYTYTSRIFSFRRKFSVNALSQQSLPVRVRFAPSPTGNLHVGGARTALFN 76
>ref|XP_002532486.1| glutamyl-tRNA synthetase 1, 2, putative [Ricinus communis]
gi|223527811|gb|EEF29910.1| glutamyl-tRNA synthetase 1,
2, putative [Ricinus communis]
Length = 577
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/51 (60%), Positives = 32/51 (62%)
Frame = +2
Query: 254 YNNSCTTSLRISRRNKTSIACSYSPNDVRVRFAPSPTGNLHVGGARTALFN 406
YN+ LR SR S VRVRFAPSPTGNLHVGGARTALFN
Sbjct: 35 YNHIQNHQLRRSRNFSVSAGGGGEEGQVRVRFAPSPTGNLHVGGARTALFN 85
>gb|EPS57601.1| hypothetical protein M569_17216, partial [Genlisea aurea]
Length = 254
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/47 (63%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Frame = +2
Query: 269 TTSLRISRRNK-TSIACSYSPNDVRVRFAPSPTGNLHVGGARTALFN 406
T++ RI + K +S+ S P +RVRFAPSPTGNLHVGGARTALFN
Sbjct: 22 TSTRRIFKGLKFSSLLSSGEPESIRVRFAPSPTGNLHVGGARTALFN 68
>gb|AAL06875.1| AT5g64050/MHJ24_3 [Arabidopsis thaliana] gi|17064968|gb|AAL32638.1|
glutamate-tRNA ligase [Arabidopsis thaliana]
gi|21387183|gb|AAM47995.1| glutamate-tRNA ligase
[Arabidopsis thaliana]
Length = 570
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/43 (69%), Positives = 33/43 (76%), Gaps = 3/43 (6%)
Frame = +2
Query: 287 SRRNKTSIACSYSPND---VRVRFAPSPTGNLHVGGARTALFN 406
SRR+ +ACS N+ VRVRFAPSPTGNLHVGGART LFN
Sbjct: 35 SRRSFAVVACSTPVNNGGSVRVRFAPSPTGNLHVGGARTVLFN 77
>ref|XP_006364338.1| PREDICTED: glutamate--tRNA ligase, chloroplastic/mitochondrial
[Solanum tuberosum]
Length = 570
Score = 56.6 bits (135), Expect = 3e-06
Identities = 33/67 (49%), Positives = 40/67 (59%)
Frame = +2
Query: 206 LRKSNTLINCISIPNTYNNSCTTSLRISRRNKTSIACSYSPNDVRVRFAPSPTGNLHVGG 385
L+ +L+ C + Y S L RR+ + A + VRVRFAPSPTGNLHVGG
Sbjct: 18 LKNCQSLLYCRNGHRRYRQS----LCFRRRSFSIYASAGDEGAVRVRFAPSPTGNLHVGG 73
Query: 386 ARTALFN 406
ARTALFN
Sbjct: 74 ARTALFN 80