BLASTX nr result
ID: Ephedra28_contig00024088
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00024088
(408 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271967.1| PREDICTED: nuclear pore complex protein Nup9... 150 2e-34
ref|XP_006341370.1| PREDICTED: nuclear pore complex protein Nup9... 145 5e-33
gb|EMJ21482.1| hypothetical protein PRUPE_ppa000667mg [Prunus pe... 144 1e-32
ref|XP_003544079.1| PREDICTED: nuclear pore complex protein Nup9... 142 4e-32
gb|ESW14507.1| hypothetical protein PHAVU_008G287100g [Phaseolus... 142 5e-32
dbj|BAO49746.1| nuclear pore complex protein Nup96a [Nicotiana b... 142 6e-32
ref|XP_004491602.1| PREDICTED: nuclear pore complex protein Nup9... 140 1e-31
ref|XP_003618002.1| Nuclear pore complex protein Nup98-Nup96 [Me... 140 2e-31
ref|XP_006465209.1| PREDICTED: nuclear pore complex protein Nup9... 138 9e-31
ref|XP_006427580.1| hypothetical protein CICLE_v10024784mg [Citr... 137 1e-30
gb|EOY26007.1| Suppressor of auxin resistance 3 [Theobroma cacao] 135 6e-30
ref|XP_002527319.1| nucleoporin, putative [Ricinus communis] gi|... 135 6e-30
ref|XP_002303836.1| PRECOCIOUS family protein [Populus trichocar... 133 2e-29
gb|EXB67202.1| Nuclear pore complex protein [Morus notabilis] 133 3e-29
gb|EPS71530.1| hypothetical protein M569_03229, partial [Genlise... 132 4e-29
gb|ERN08348.1| hypothetical protein AMTR_s00148p00018960 [Ambore... 132 5e-29
gb|AAF14656.1|AC011713_4 Identical to gi|1297187 nucleoprotein 9... 132 6e-29
ref|NP_178183.2| suppressor of auxin resistance 3 [Arabidopsis t... 132 6e-29
gb|AAN03675.1|AF411838_1 putative nucleoporin PRECOZ [Arabidopsi... 132 6e-29
ref|XP_006649480.1| PREDICTED: nuclear pore complex protein Nup9... 131 1e-28
>ref|XP_002271967.1| PREDICTED: nuclear pore complex protein Nup98-Nup96 [Vitis
vinifera]
Length = 1041
Score = 150 bits (378), Expect = 2e-34
Identities = 80/147 (54%), Positives = 102/147 (69%), Gaps = 12/147 (8%)
Frame = +2
Query: 2 VWDLIKVLF---EDKMKKYETAVENE---------GVRGVDPEAVPLMRRAAFSRWLQES 145
VW+LIKVLF E + +NE G VD EA+PL+RRA FS WLQES
Sbjct: 499 VWELIKVLFSAREISGQSKSAGADNEEDMMHDRSEGSSDVDLEALPLIRRAEFSYWLQES 558
Query: 146 VEHRVQREIKSMEEGDDLKQVFSLLSGMQLEEAIQIVAYRGDVRLACLISQAGGHTINRE 325
V HRVQ E+ S+ E DL+Q+ LL+G QL+ A+++ A RGDVRLACL+SQAGG TINR
Sbjct: 559 VCHRVQDEVSSLNESSDLEQILLLLTGRQLDAAVELAASRGDVRLACLLSQAGGSTINRA 618
Query: 326 FMADQLDSWVSDGMDFNFIEEDRMKLF 406
+A QLD W ++G+DFNFIE+DR++LF
Sbjct: 619 DVAQQLDLWRTNGLDFNFIEKDRIRLF 645
>ref|XP_006341370.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Solanum
tuberosum]
Length = 1033
Score = 145 bits (366), Expect = 5e-33
Identities = 74/147 (50%), Positives = 101/147 (68%), Gaps = 12/147 (8%)
Frame = +2
Query: 2 VWDLIKVLFED-----KMKKYETAVENEGV-------RGVDPEAVPLMRRAAFSRWLQES 145
+W+LIKVLF K+K E E + + VDPEA+PL+RRA FS WLQES
Sbjct: 490 IWELIKVLFSTRQLSGKLKSLEDEDEEDMIPDARETSSDVDPEALPLIRRAEFSYWLQES 549
Query: 146 VEHRVQREIKSMEEGDDLKQVFSLLSGMQLEEAIQIVAYRGDVRLACLISQAGGHTINRE 325
V HRVQ E+ S+ + DL+ +F LL+G QL+ A+++ A RGDVRLACL+SQAGG +NR
Sbjct: 550 VCHRVQEEVSSLNDSSDLQHMFLLLTGRQLDAAVELAASRGDVRLACLLSQAGGSMVNRS 609
Query: 326 FMADQLDSWVSDGMDFNFIEEDRMKLF 406
+A QLD W +G+DFNF+E +R+++F
Sbjct: 610 DVARQLDIWRVNGLDFNFVETERIRVF 636
>gb|EMJ21482.1| hypothetical protein PRUPE_ppa000667mg [Prunus persica]
Length = 1042
Score = 144 bits (363), Expect = 1e-32
Identities = 77/147 (52%), Positives = 100/147 (68%), Gaps = 12/147 (8%)
Frame = +2
Query: 2 VWDLIKVLFED-----KMKKYETAVENEGVRGV-------DPEAVPLMRRAAFSRWLQES 145
+W+LIKVLF D KMK E E V+ V D EA+PL+RRA FS WLQE+
Sbjct: 498 IWELIKVLFSDRENGGKMKSLGADNEEEMVQDVKEASQEVDVEALPLIRRAEFSYWLQEN 557
Query: 146 VEHRVQREIKSMEEGDDLKQVFSLLSGMQLEEAIQIVAYRGDVRLACLISQAGGHTINRE 325
V HRVQ + S+ E L+ + LLSG QL+ A+++ A RGDVRLACL+SQAGG +NR
Sbjct: 558 VCHRVQERMSSLNESSYLEYILLLLSGRQLDAAVELAASRGDVRLACLLSQAGGSIVNRS 617
Query: 326 FMADQLDSWVSDGMDFNFIEEDRMKLF 406
MA QLD W S+G+DF+FIE+DR++L+
Sbjct: 618 DMAQQLDRWRSNGLDFSFIEKDRIRLY 644
>ref|XP_003544079.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X1
[Glycine max] gi|571506071|ref|XP_006595657.1|
PREDICTED: nuclear pore complex protein Nup98-Nup96-like
isoform X2 [Glycine max]
Length = 1022
Score = 142 bits (359), Expect = 4e-32
Identities = 72/146 (49%), Positives = 102/146 (69%), Gaps = 12/146 (8%)
Frame = +2
Query: 5 WDLIKVLFEDKMKKYET---AVENEG---------VRGVDPEAVPLMRRAAFSRWLQESV 148
W+LI+VLF D+ +K + +NE + VD EA+PLMRRA FS WL+ESV
Sbjct: 479 WELIRVLFSDREQKGQVESLGADNEEDMMQDIKEICQDVDREALPLMRRAEFSYWLRESV 538
Query: 149 EHRVQREIKSMEEGDDLKQVFSLLSGMQLEEAIQIVAYRGDVRLACLISQAGGHTINREF 328
+ VQ +I S+ + D L+ +F LL+G QL+EA+Q+ +GDVRLACL+SQAGG T+NR
Sbjct: 539 SYHVQNQISSLNDSDYLQHIFVLLTGRQLDEAVQLAVSKGDVRLACLLSQAGGSTVNRSD 598
Query: 329 MADQLDSWVSDGMDFNFIEEDRMKLF 406
+A QLD W + G+DF+FIE+DR++L+
Sbjct: 599 IARQLDIWRNKGLDFSFIEKDRLRLY 624
>gb|ESW14507.1| hypothetical protein PHAVU_008G287100g [Phaseolus vulgaris]
gi|561015647|gb|ESW14508.1| hypothetical protein
PHAVU_008G287100g [Phaseolus vulgaris]
Length = 1022
Score = 142 bits (358), Expect = 5e-32
Identities = 72/146 (49%), Positives = 102/146 (69%), Gaps = 12/146 (8%)
Frame = +2
Query: 5 WDLIKVLFEDKMKKYET---AVENEG---------VRGVDPEAVPLMRRAAFSRWLQESV 148
W+LI+VLF D+ +K + +NE + VD EA+PL+RRA FS WL+ESV
Sbjct: 479 WELIRVLFSDREEKGQVESLGADNEEDMMQDMKEISQDVDREALPLIRRAEFSYWLRESV 538
Query: 149 EHRVQREIKSMEEGDDLKQVFSLLSGMQLEEAIQIVAYRGDVRLACLISQAGGHTINREF 328
+ VQ +I S+ + D L+ +F LL+G QL+EA+Q+ +GDVRLACL+S+AGG T+NR
Sbjct: 539 SYHVQNQISSLNDSDYLQHIFVLLTGRQLDEAVQLAVSKGDVRLACLLSEAGGSTVNRSD 598
Query: 329 MADQLDSWVSDGMDFNFIEEDRMKLF 406
+A QLD W S G+DF+FIEEDR++L+
Sbjct: 599 IARQLDVWRSKGLDFSFIEEDRLRLY 624
>dbj|BAO49746.1| nuclear pore complex protein Nup96a [Nicotiana benthamiana]
Length = 1037
Score = 142 bits (357), Expect = 6e-32
Identities = 74/146 (50%), Positives = 98/146 (67%), Gaps = 12/146 (8%)
Frame = +2
Query: 2 VWDLIKVLFED-----KMKKYETAVEN-------EGVRGVDPEAVPLMRRAAFSRWLQES 145
+W+LIKVLF K K E E E V VDPEA+PL+RRA FS WLQES
Sbjct: 493 IWELIKVLFSSRQLSGKSKSLEDEDEEDMIPDTRETVSDVDPEALPLIRRAEFSYWLQES 552
Query: 146 VEHRVQREIKSMEEGDDLKQVFSLLSGMQLEEAIQIVAYRGDVRLACLISQAGGHTINRE 325
V HRVQ E+ S+ + DL+ +F LL+G QL+ A+++ A RGDVRLACL+SQAGG +NR
Sbjct: 553 VCHRVQEEVSSLNDSSDLQHMFLLLTGRQLDAAVELAASRGDVRLACLLSQAGGSMVNRS 612
Query: 326 FMADQLDSWVSDGMDFNFIEEDRMKL 403
+ QLD W +G+DFNF+E +R+++
Sbjct: 613 DVDRQLDLWRVNGLDFNFVETERIRV 638
>ref|XP_004491602.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X1
[Cicer arietinum] gi|502099969|ref|XP_004491603.1|
PREDICTED: nuclear pore complex protein Nup98-Nup96-like
isoform X2 [Cicer arietinum]
Length = 1022
Score = 140 bits (354), Expect = 1e-31
Identities = 73/148 (49%), Positives = 102/148 (68%), Gaps = 14/148 (9%)
Frame = +2
Query: 5 WDLIKVLFEDKMKKYETAVENEGV--------------RGVDPEAVPLMRRAAFSRWLQE 142
W+LI+VLF ++ +K + VE+ G + VD EA+PLMRRA FS WL+E
Sbjct: 479 WELIRVLFSEREQKGQ--VESLGADNEEDMMQDIKEVDQDVDQEALPLMRRAEFSYWLRE 536
Query: 143 SVEHRVQREIKSMEEGDDLKQVFSLLSGMQLEEAIQIVAYRGDVRLACLISQAGGHTINR 322
SV + VQ +I S+ + L+ VF+LL+G QL+EA+Q+ +GDVRLACL+SQAGG T+NR
Sbjct: 537 SVSYHVQNQISSLNDSHYLQHVFTLLTGRQLDEAVQLAVSKGDVRLACLLSQAGGSTMNR 596
Query: 323 EFMADQLDSWVSDGMDFNFIEEDRMKLF 406
+A QLD W + G+DFNFIE DR++L+
Sbjct: 597 RDIAKQLDIWRNKGLDFNFIETDRLRLY 624
>ref|XP_003618002.1| Nuclear pore complex protein Nup98-Nup96 [Medicago truncatula]
gi|355519337|gb|AET00961.1| Nuclear pore complex protein
Nup98-Nup96 [Medicago truncatula]
Length = 1022
Score = 140 bits (352), Expect = 2e-31
Identities = 71/148 (47%), Positives = 101/148 (68%), Gaps = 14/148 (9%)
Frame = +2
Query: 5 WDLIKVLFEDKMKKYETAVENEGV--------------RGVDPEAVPLMRRAAFSRWLQE 142
W+LI+VLF ++ +K + +E+ G VD EA+PL+RRA FS W++E
Sbjct: 479 WELIRVLFSERKQKGQ--IESLGADNEEDMMEDIKEVDNDVDQEALPLIRRAEFSYWMRE 536
Query: 143 SVEHRVQREIKSMEEGDDLKQVFSLLSGMQLEEAIQIVAYRGDVRLACLISQAGGHTINR 322
SV + VQ +I S+ + L+ VF+LL+G QL+EA+Q+ GDVRLACL+SQAGG T+NR
Sbjct: 537 SVSYHVQNQISSLNDSHYLQHVFTLLTGRQLDEAVQLAVSNGDVRLACLLSQAGGSTLNR 596
Query: 323 EFMADQLDSWVSDGMDFNFIEEDRMKLF 406
+A QLD W + G+DFNFIEEDR++L+
Sbjct: 597 SDIAKQLDIWRNKGLDFNFIEEDRLRLY 624
>ref|XP_006465209.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Citrus
sinensis]
Length = 1041
Score = 138 bits (347), Expect = 9e-31
Identities = 70/147 (47%), Positives = 100/147 (68%), Gaps = 12/147 (8%)
Frame = +2
Query: 2 VWDLIKVLFEDKMKKYETAVENE------------GVRGVDPEAVPLMRRAAFSRWLQES 145
VW+LIKVLF ++ + E + G D EA+PL+RRA FS WL+ES
Sbjct: 497 VWELIKVLFSERENGGQLRSEGDDNEEEMMQDIKDGPPEFDLEALPLIRRAEFSCWLKES 556
Query: 146 VEHRVQREIKSMEEGDDLKQVFSLLSGMQLEEAIQIVAYRGDVRLACLISQAGGHTINRE 325
V HRVQ ++ S++E + LK +F LL+G QL+ ++++ A RGDVRLACL+SQAGG T++R
Sbjct: 557 VCHRVQEDVSSLDESNYLKHIFLLLTGRQLDSSVELAASRGDVRLACLLSQAGGSTVSRS 616
Query: 326 FMADQLDSWVSDGMDFNFIEEDRMKLF 406
+A QLD W +G+DF FIE+DR++L+
Sbjct: 617 DIAQQLDLWRVNGLDFKFIEKDRIRLY 643
>ref|XP_006427580.1| hypothetical protein CICLE_v10024784mg [Citrus clementina]
gi|557529570|gb|ESR40820.1| hypothetical protein
CICLE_v10024784mg [Citrus clementina]
Length = 1041
Score = 137 bits (346), Expect = 1e-30
Identities = 70/147 (47%), Positives = 100/147 (68%), Gaps = 12/147 (8%)
Frame = +2
Query: 2 VWDLIKVLFEDKMKKYETAVENE------------GVRGVDPEAVPLMRRAAFSRWLQES 145
VW+LIKVLF ++ + E + G D EA+PL+RRA FS WL+ES
Sbjct: 497 VWELIKVLFSERENGGQLRSEGDDNEEEMMQDIKDGPPEFDLEALPLIRRAEFSCWLKES 556
Query: 146 VEHRVQREIKSMEEGDDLKQVFSLLSGMQLEEAIQIVAYRGDVRLACLISQAGGHTINRE 325
V HRVQ ++ S++E + LK +F LL+G QL+ ++++ A RGDVRLACL+SQAGG T++R
Sbjct: 557 VCHRVQEDVSSLDESNYLKHIFLLLTGRQLDSSVELAASRGDVRLACLLSQAGGSTVSRS 616
Query: 326 FMADQLDSWVSDGMDFNFIEEDRMKLF 406
+A QLD W +G+DF FIE+DR++L+
Sbjct: 617 DIAHQLDLWRVNGLDFKFIEKDRIRLY 643
>gb|EOY26007.1| Suppressor of auxin resistance 3 [Theobroma cacao]
Length = 1069
Score = 135 bits (340), Expect = 6e-30
Identities = 72/147 (48%), Positives = 99/147 (67%), Gaps = 12/147 (8%)
Frame = +2
Query: 2 VWDLIKVLFEDKM------------KKYETAVENEGVRGVDPEAVPLMRRAAFSRWLQES 145
VW+LIKVLF ++ ++ E EG VD E++PL+RRA FS WLQES
Sbjct: 525 VWELIKVLFSERENSAHLKSMGADNEEDEMQDIKEGPPEVDLESLPLIRRAEFSCWLQES 584
Query: 146 VEHRVQREIKSMEEGDDLKQVFSLLSGMQLEEAIQIVAYRGDVRLACLISQAGGHTINRE 325
V HRVQ I S+ + L+ +F LL+G QL+ A+++ A +GDVRLACL+SQAGG T+NR
Sbjct: 585 VCHRVQEGISSVNDSGYLEHLFFLLTGRQLDAAVELAASKGDVRLACLLSQAGGSTVNRS 644
Query: 326 FMADQLDSWVSDGMDFNFIEEDRMKLF 406
+A QLD W +G+DF FIE+DR++L+
Sbjct: 645 DVARQLDIWKINGLDFKFIEKDRIRLY 671
>ref|XP_002527319.1| nucleoporin, putative [Ricinus communis]
gi|223533319|gb|EEF35071.1| nucleoporin, putative
[Ricinus communis]
Length = 1067
Score = 135 bits (340), Expect = 6e-30
Identities = 69/147 (46%), Positives = 99/147 (67%), Gaps = 12/147 (8%)
Frame = +2
Query: 2 VWDLIKVLFEDKMKKYET---AVENE---------GVRGVDPEAVPLMRRAAFSRWLQES 145
VW+LIKVLF ++ ++ +NE G +D E++PL+RRA FS WLQES
Sbjct: 524 VWELIKVLFSERENSGQSKSMGADNEEDMMQDIKEGSLEIDQESLPLIRRAEFSCWLQES 583
Query: 146 VEHRVQREIKSMEEGDDLKQVFSLLSGMQLEEAIQIVAYRGDVRLACLISQAGGHTINRE 325
V HRVQ E+ S+ E L+ + L++G QL+ A++I RGDVRLACL+ QAGG +NR
Sbjct: 584 VCHRVQEEVSSLSESSYLEHILLLMTGRQLDGAVEIAVSRGDVRLACLLGQAGGSMVNRT 643
Query: 326 FMADQLDSWVSDGMDFNFIEEDRMKLF 406
+A QLD W ++G+DFNFIE++R++L+
Sbjct: 644 DVARQLDLWRNNGLDFNFIEKERIRLY 670
>ref|XP_002303836.1| PRECOCIOUS family protein [Populus trichocarpa]
gi|222841268|gb|EEE78815.1| PRECOCIOUS family protein
[Populus trichocarpa]
Length = 1067
Score = 133 bits (335), Expect = 2e-29
Identities = 72/147 (48%), Positives = 100/147 (68%), Gaps = 12/147 (8%)
Frame = +2
Query: 2 VWDLIKVLFEDKMKKYET---AVENE---------GVRGVDPEAVPLMRRAAFSRWLQES 145
+W+LIKVLF ++ ++ +NE VD EA+PL+RRA FS WLQES
Sbjct: 524 IWELIKVLFSERENSGQSKSVGADNEEDMMQDLKESSLEVDQEALPLIRRAEFSCWLQES 583
Query: 146 VEHRVQREIKSMEEGDDLKQVFSLLSGMQLEEAIQIVAYRGDVRLACLISQAGGHTINRE 325
V HRVQ E+ S+ E L+ +F LL+G QL+ A+++ A RGDVRLACL+SQAGG +N
Sbjct: 584 VCHRVQDEVSSLNESSYLEHIFLLLTGRQLDAAVEMAASRGDVRLACLLSQAGG--LNHA 641
Query: 326 FMADQLDSWVSDGMDFNFIEEDRMKLF 406
+A QLD W S+G+DFNFIE++R++L+
Sbjct: 642 DIARQLDLWRSNGLDFNFIEKERVRLY 668
>gb|EXB67202.1| Nuclear pore complex protein [Morus notabilis]
Length = 948
Score = 133 bits (334), Expect = 3e-29
Identities = 71/147 (48%), Positives = 99/147 (67%), Gaps = 12/147 (8%)
Frame = +2
Query: 2 VWDLIKVLFEDK-----MKKYETAVENEGVRGV-------DPEAVPLMRRAAFSRWLQES 145
VW+LI+VLF D+ +K E E + ++ V DPEA+PL+RRA FS WLQES
Sbjct: 521 VWELIRVLFSDREKSGQLKTSEADNEEDMMQDVKEASPEADPEALPLIRRAEFSYWLQES 580
Query: 146 VEHRVQREIKSMEEGDDLKQVFSLLSGMQLEEAIQIVAYRGDVRLACLISQAGGHTINRE 325
V RVQ +I S+ E L+ +F LL+G QL+ A ++ + DVRLACL+SQAGG +NR
Sbjct: 581 VCGRVQDDISSLNETSYLQHIFLLLTGRQLDSAAELAVSKSDVRLACLLSQAGGSMVNRS 640
Query: 326 FMADQLDSWVSDGMDFNFIEEDRMKLF 406
+A QLD W +G+DF+FIE+DR++L+
Sbjct: 641 DVAKQLDLWKVNGLDFSFIEKDRIRLY 667
>gb|EPS71530.1| hypothetical protein M569_03229, partial [Genlisea aurea]
Length = 1005
Score = 132 bits (333), Expect = 4e-29
Identities = 69/141 (48%), Positives = 95/141 (67%), Gaps = 7/141 (4%)
Frame = +2
Query: 2 VWDLIKVLFEDKMKKYETAVENEGV-------RGVDPEAVPLMRRAAFSRWLQESVEHRV 160
VW+LIKVLF + K +++ + +D EA+PL+RRA FS WLQES V
Sbjct: 471 VWELIKVLFSKRKIKPMDGGDDDMIPDQKDSDTDIDEEALPLLRRAEFSYWLQESCYDHV 530
Query: 161 QREIKSMEEGDDLKQVFSLLSGMQLEEAIQIVAYRGDVRLACLISQAGGHTINREFMADQ 340
E+ S +E LKQ+F LL+G QL+ A+++ A RGDVRLACL+SQAGG T NR +A Q
Sbjct: 531 LAEVSSFDEQGYLKQIFLLLTGRQLDNAVELAASRGDVRLACLLSQAGGSTSNRADIAYQ 590
Query: 341 LDSWVSDGMDFNFIEEDRMKL 403
LD W +G+DF+FIE+DR+++
Sbjct: 591 LDLWRKNGLDFDFIEDDRVRI 611
>gb|ERN08348.1| hypothetical protein AMTR_s00148p00018960 [Amborella trichopoda]
Length = 1057
Score = 132 bits (332), Expect = 5e-29
Identities = 69/146 (47%), Positives = 97/146 (66%), Gaps = 12/146 (8%)
Frame = +2
Query: 5 WDLIKVLFEDKMKK--YETAVENEGVR----------GVDPEAVPLMRRAAFSRWLQESV 148
W+LI VLF ++ K E+A ++ + V+ EA PL+RR+ FS WLQESV
Sbjct: 515 WELINVLFSEREAKGSSESAEMDDAMDMMLDKRVDYPDVESEAEPLIRRSDFSSWLQESV 574
Query: 149 EHRVQREIKSMEEGDDLKQVFSLLSGMQLEEAIQIVAYRGDVRLACLISQAGGHTINREF 328
HRVQ E+ + EG L+ +FSLL+G QL A+++ +GDVR+ACL+SQAGG +NR
Sbjct: 575 CHRVQEEMSRLNEGRYLETIFSLLTGRQLGAAVELAVDKGDVRMACLLSQAGGSMVNRSD 634
Query: 329 MADQLDSWVSDGMDFNFIEEDRMKLF 406
M Q+D W DG+DFNFIE++R+KL+
Sbjct: 635 MTAQIDVWKMDGLDFNFIEKERLKLY 660
>gb|AAF14656.1|AC011713_4 Identical to gi|1297187 nucleoprotein 98 homolog from Arabidopsis
thaliana cosmid gb|U53501. EST gb|W43800 comes from this
gene [Arabidopsis thaliana] gi|1297187|gb|AAA98914.1|
Theoretical protein with similarity to protein encoded
by GenBank Accession Number U41815, nucleoporin 98
[Arabidopsis thaliana]
Length = 850
Score = 132 bits (331), Expect = 6e-29
Identities = 67/147 (45%), Positives = 95/147 (64%), Gaps = 12/147 (8%)
Frame = +2
Query: 2 VWDLIKVLFEDKMKK----YETAVENEGVRG--------VDPEAVPLMRRAAFSRWLQES 145
VW+LIKVLF ++ Y + E V +D EA+PL+RRA FS WLQES
Sbjct: 494 VWELIKVLFSERQSTERLMYAASDNEEDVMQDVKEDSAKIDTEALPLIRRAEFSCWLQES 553
Query: 146 VEHRVQREIKSMEEGDDLKQVFSLLSGMQLEEAIQIVAYRGDVRLACLISQAGGHTINRE 325
V HRVQ ++ + L+ +F LL+G +L+ A+++ +GDVRLACL+SQAGG T+NR
Sbjct: 554 VSHRVQEDVSDLNGSSYLEHLFFLLTGRELDSAVELAISKGDVRLACLLSQAGGSTVNRN 613
Query: 326 FMADQLDSWVSDGMDFNFIEEDRMKLF 406
+ QL W +G+DFNFIE++R+KL+
Sbjct: 614 DILQQLHLWRRNGLDFNFIEKERIKLY 640
>ref|NP_178183.2| suppressor of auxin resistance 3 [Arabidopsis thaliana]
gi|22652299|gb|AAN03676.1|AF411839_1 putative
nucleoporin PRECOZ [Arabidopsis thaliana]
gi|61353788|gb|AAX44044.1| putative nucleoporin 96
[Arabidopsis thaliana] gi|332198315|gb|AEE36436.1|
suppressor of auxin resistance 3 [Arabidopsis thaliana]
Length = 1046
Score = 132 bits (331), Expect = 6e-29
Identities = 67/147 (45%), Positives = 95/147 (64%), Gaps = 12/147 (8%)
Frame = +2
Query: 2 VWDLIKVLFEDKMKK----YETAVENEGVRG--------VDPEAVPLMRRAAFSRWLQES 145
VW+LIKVLF ++ Y + E V +D EA+PL+RRA FS WLQES
Sbjct: 501 VWELIKVLFSERQSTERLMYAASDNEEDVMQDVKEDSAKIDTEALPLIRRAEFSCWLQES 560
Query: 146 VEHRVQREIKSMEEGDDLKQVFSLLSGMQLEEAIQIVAYRGDVRLACLISQAGGHTINRE 325
V HRVQ ++ + L+ +F LL+G +L+ A+++ +GDVRLACL+SQAGG T+NR
Sbjct: 561 VSHRVQEDVSDLNGSSYLEHLFFLLTGRELDSAVELAISKGDVRLACLLSQAGGSTVNRN 620
Query: 326 FMADQLDSWVSDGMDFNFIEEDRMKLF 406
+ QL W +G+DFNFIE++R+KL+
Sbjct: 621 DILQQLHLWRRNGLDFNFIEKERIKLY 647
>gb|AAN03675.1|AF411838_1 putative nucleoporin PRECOZ [Arabidopsis thaliana]
Length = 1046
Score = 132 bits (331), Expect = 6e-29
Identities = 67/147 (45%), Positives = 95/147 (64%), Gaps = 12/147 (8%)
Frame = +2
Query: 2 VWDLIKVLFEDKMKK----YETAVENEGVRG--------VDPEAVPLMRRAAFSRWLQES 145
VW+LIKVLF ++ Y + E V +D EA+PL+RRA FS WLQES
Sbjct: 501 VWELIKVLFSERQSTERLMYAASDNEEDVMQDVKEDSAKIDTEALPLIRRAEFSCWLQES 560
Query: 146 VEHRVQREIKSMEEGDDLKQVFSLLSGMQLEEAIQIVAYRGDVRLACLISQAGGHTINRE 325
V HRVQ ++ + L+ +F LL+G +L+ A+++ +GDVRLACL+SQAGG T+NR
Sbjct: 561 VSHRVQEDVSDLNGSSYLEHLFFLLTGRELDSAVELAISKGDVRLACLLSQAGGSTVNRN 620
Query: 326 FMADQLDSWVSDGMDFNFIEEDRMKLF 406
+ QL W +G+DFNFIE++R+KL+
Sbjct: 621 DILQQLHLWRRNGLDFNFIEKERIKLY 647
>ref|XP_006649480.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Oryza
brachyantha]
Length = 1003
Score = 131 bits (329), Expect = 1e-28
Identities = 68/147 (46%), Positives = 97/147 (65%), Gaps = 12/147 (8%)
Frame = +2
Query: 2 VWDLIKVLFEDKMKKYETAV------------ENEGVRGVDPEAVPLMRRAAFSRWLQES 145
VW+LI+VLF ++ + + EG +D EA+PL+RRA FS WLQ+S
Sbjct: 462 VWELIRVLFSERATGTQLEPTGDEDQEGMILDKKEGSVAIDLEALPLVRRADFSNWLQDS 521
Query: 146 VEHRVQREIKSMEEGDDLKQVFSLLSGMQLEEAIQIVAYRGDVRLACLISQAGGHTINRE 325
V HRVQ E S+ + L+ + LL+G QL+ A++I A RGDVRLA L+SQAGG +NR
Sbjct: 522 VCHRVQGEAGSLNDARYLEHIILLLTGRQLDTAMEIAASRGDVRLAILLSQAGGSMLNRS 581
Query: 326 FMADQLDSWVSDGMDFNFIEEDRMKLF 406
+A QLD W ++G+DFN+IE+DR+K++
Sbjct: 582 DLAQQLDLWKANGLDFNYIEDDRVKIY 608