BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00024060
         (518 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006829716.1| hypothetical protein AMTR_s00126p00080460 [A...    82   1e-13
ref|XP_006854426.1| hypothetical protein AMTR_s00039p00210570 [A...    81   1e-13
ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containi...    80   4e-13
ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containi...    79   6e-13
ref|NP_178260.1| pentatricopeptide repeat-containing protein [Ar...    79   6e-13
gb|AFG45721.1| hypothetical protein 0_12933_01, partial [Pinus t...    78   1e-12
gb|AFG45720.1| hypothetical protein 0_12933_01, partial [Pinus t...    78   1e-12
gb|AEW07845.1| hypothetical protein 0_12933_01, partial [Pinus r...    78   1e-12
gb|AFG45729.1| hypothetical protein 0_12933_01, partial [Pinus t...    77   2e-12
ref|XP_002876755.1| pentatricopeptide repeat-containing protein ...    77   2e-12
ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    77   3e-12
ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containi...    77   3e-12
gb|AFG45724.1| hypothetical protein 0_12933_01, partial [Pinus t...    77   3e-12
gb|AFG45722.1| hypothetical protein 0_12933_01, partial [Pinus t...    77   3e-12
gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygr...    77   3e-12
ref|XP_001757146.1| predicted protein [Physcomitrella patens] gi...    77   3e-12
ref|XP_002974330.1| hypothetical protein SELMODRAFT_50864 [Selag...    76   4e-12
ref|XP_006290812.1| hypothetical protein CARUB_v10016917mg [Caps...    76   5e-12
ref|XP_002526753.1| pentatricopeptide repeat-containing protein,...    75   7e-12
ref|XP_006361605.1| PREDICTED: pentatricopeptide repeat-containi...    75   9e-12

>ref|XP_006829716.1| hypothetical protein AMTR_s00126p00080460 [Amborella trichopoda]
           gi|548835235|gb|ERM97132.1| hypothetical protein
           AMTR_s00126p00080460 [Amborella trichopoda]
          Length = 358

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 45/129 (34%), Positives = 72/129 (55%)
 Frame = +1

Query: 130 KPLWRKNHQSMSAFTTLDNNQRVSIENLMHHLDQCMNRRLLLEGMKVHAHITVRGFTGKK 309
           KP +  N  S+SA        R ++ +L H L +C N R L +G ++H    V GF    
Sbjct: 24  KPDYPLNQTSLSA--------RPTLAHLTHLLQKCSNCRALQQGKQIHQLTIVHGFCDSY 75

Query: 310 PLINKVLAVYVNCNRMVDARHVFDEMQWKNTFVYNTLIKGYAENNLPEESLRLYTDMADQ 489
            L  K++ VYV C+ +V A  +FD+M  +N F + ++I+ Y++N +  E L+LY  M ++
Sbjct: 76  -LCTKLVHVYVRCSEIVPALQLFDQMPQRNVFAWTSIIEFYSQNFMYRECLQLYYQMIEE 134

Query: 490 GVRPDKFTF 516
           GV PD + F
Sbjct: 135 GVEPDGYVF 143


>ref|XP_006854426.1| hypothetical protein AMTR_s00039p00210570 [Amborella trichopoda]
           gi|548858102|gb|ERN15893.1| hypothetical protein
           AMTR_s00039p00210570 [Amborella trichopoda]
          Length = 674

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
 Frame = +1

Query: 76  LHLRMLRNVGKSMLGKKLKPLWRKNHQSMSAFTTLD-NNQRVSIENLMHHLDQCMNRRLL 252
           + +R L+ + ++      + L RK+      F T        SI++L+ +L   +  R L
Sbjct: 35  IRVRSLQPLNQAFAHTSDQGLVRKHVLGFRYFMTATLEPSATSIDDLLAYLRHAIGLRSL 94

Query: 253 LEGMKVHAHITVRGFTGKKPLINKVLAVYVNCNRMVDARHVFDEMQWKNTFVYNTLIKGY 432
               + HA + + GF   + +   ++ VY  CN++ DAR VFD +QWKN F++N++I  Y
Sbjct: 95  QLARQAHALVWILGFAQNQFISVNLITVYSTCNKLSDARLVFDTIQWKNIFLWNSIISAY 154

Query: 433 AENNLPEESLRLYTDMADQGVRPDKFTF 516
            +  + +E L LY  + +  VRPD FTF
Sbjct: 155 VKYTVWDEPLILYDKLLNSDVRPDHFTF 182


>ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 48/132 (36%), Positives = 71/132 (53%), Gaps = 6/132 (4%)
 Frame = +1

Query: 139 WRKNHQSMSAFTTLDNNQRVSI----ENLMHHLDQCMNRRLLLEGMKVHAHITVRGFTGK 306
           + KN  S +AF   D   +  +      L+  L  C + + + EG  +H +  VR   G 
Sbjct: 237 YAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGY-AVRNSIGN 295

Query: 307 --KPLINKVLAVYVNCNRMVDARHVFDEMQWKNTFVYNTLIKGYAENNLPEESLRLYTDM 480
             K   N ++ +Y NCN MVDAR +F+ ++WK+T  +N++I GYA N    ESLRL+  M
Sbjct: 296 YNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRM 355

Query: 481 ADQGVRPDKFTF 516
           A  G  PD+ TF
Sbjct: 356 ALDGSGPDQVTF 367



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
 Frame = +1

Query: 223 LDQCMNRRLLLEGMKVHAHITVRGFTGKKPLIN-KVLAVYVNCNRMVDARHVFDEMQWKN 399
           L    N +   +G ++HAH+           +N K+ A Y  C  M  A  +FD +  KN
Sbjct: 66  LQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKN 125

Query: 400 TFVYNTLIKGYAENNLPEESLRLYTDMADQGVRPDKFTF 516
           +F++N +I+GYA N LP +SL LY +M   G R D FT+
Sbjct: 126 SFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTY 164


>ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 38/99 (38%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
 Frame = +1

Query: 223 LDQCMNRRLLLEGMKVHAHITVRGFTGKKP-LINKVLAVYVNCNRMVDARHVFDEMQWKN 399
           L    N + L + +++HAH+T  G   +   L  K+ A Y  C  M  A+H+FD++  KN
Sbjct: 29  LQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLKN 88

Query: 400 TFVYNTLIKGYAENNLPEESLRLYTDMADQGVRPDKFTF 516
           +F++N++I+GYA NN P  +L LY  M   G +PD FT+
Sbjct: 89  SFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTY 127


>ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g01510, mitochondrial; Flags: Precursor
           gi|3785980|gb|AAC67327.1| hypothetical protein
           [Arabidopsis thaliana] gi|330250369|gb|AEC05463.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 584

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 41/84 (48%), Positives = 51/84 (60%)
 Frame = +1

Query: 265 KVHAHITVRGFTGKKPLINKVLAVYVNCNRMVDARHVFDEMQWKNTFVYNTLIKGYAENN 444
           K+HA +   GF+ K  L+ ++L   V    M  AR VFDEM     F++NTL KGY  N 
Sbjct: 29  KIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQ 88

Query: 445 LPEESLRLYTDMADQGVRPDKFTF 516
           LP ESL LY  M D GVRPD+FT+
Sbjct: 89  LPFESLLLYKKMRDLGVRPDEFTY 112


>gb|AFG45721.1| hypothetical protein 0_12933_01, partial [Pinus taeda]
           gi|383130011|gb|AFG45726.1| hypothetical protein
           0_12933_01, partial [Pinus taeda]
           gi|383130015|gb|AFG45730.1| hypothetical protein
           0_12933_01, partial [Pinus taeda]
           gi|383130016|gb|AFG45731.1| hypothetical protein
           0_12933_01, partial [Pinus taeda]
           gi|383130017|gb|AFG45732.1| hypothetical protein
           0_12933_01, partial [Pinus taeda]
           gi|383130019|gb|AFG45734.1| hypothetical protein
           0_12933_01, partial [Pinus taeda]
           gi|383130020|gb|AFG45735.1| hypothetical protein
           0_12933_01, partial [Pinus taeda]
          Length = 147

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 36/98 (36%), Positives = 54/98 (55%)
 Frame = +1

Query: 223 LDQCMNRRLLLEGMKVHAHITVRGFTGKKPLINKVLAVYVNCNRMVDARHVFDEMQWKNT 402
           L  C  +  L EG  +HAHI  R       L N ++ +YV C  + DAR VFD M  ++ 
Sbjct: 44  LQSCTKKNALPEGKLIHAHINERAPATDTFLHNSLIMMYVRCRNLTDARKVFDRMPERDD 103

Query: 403 FVYNTLIKGYAENNLPEESLRLYTDMADQGVRPDKFTF 516
           F +N +I  Y ++ + EE+LR++  M   G+ P+ FTF
Sbjct: 104 FSWNVMIAAYTKHGIAEEALRMFYQMQRTGIEPNSFTF 141


>gb|AFG45720.1| hypothetical protein 0_12933_01, partial [Pinus taeda]
           gi|383130008|gb|AFG45723.1| hypothetical protein
           0_12933_01, partial [Pinus taeda]
           gi|383130010|gb|AFG45725.1| hypothetical protein
           0_12933_01, partial [Pinus taeda]
           gi|383130012|gb|AFG45727.1| hypothetical protein
           0_12933_01, partial [Pinus taeda]
           gi|383130013|gb|AFG45728.1| hypothetical protein
           0_12933_01, partial [Pinus taeda]
           gi|383130018|gb|AFG45733.1| hypothetical protein
           0_12933_01, partial [Pinus taeda]
          Length = 147

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 36/98 (36%), Positives = 54/98 (55%)
 Frame = +1

Query: 223 LDQCMNRRLLLEGMKVHAHITVRGFTGKKPLINKVLAVYVNCNRMVDARHVFDEMQWKNT 402
           L  C  +  L EG  +HAHI  R       L N ++ +YV C  + DAR VFD M  ++ 
Sbjct: 44  LQSCTKKNALPEGKLIHAHINERAPATDTFLHNSLIMMYVRCRNLTDARKVFDRMPERDD 103

Query: 403 FVYNTLIKGYAENNLPEESLRLYTDMADQGVRPDKFTF 516
           F +N +I  Y ++ + EE+LR++  M   G+ P+ FTF
Sbjct: 104 FSWNVMIAAYTKHGIAEEALRMFYQMQRTGIEPNSFTF 141


>gb|AEW07845.1| hypothetical protein 0_12933_01, partial [Pinus radiata]
          Length = 147

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 36/98 (36%), Positives = 54/98 (55%)
 Frame = +1

Query: 223 LDQCMNRRLLLEGMKVHAHITVRGFTGKKPLINKVLAVYVNCNRMVDARHVFDEMQWKNT 402
           L  C  +  L EG  +HAHI  R       L N ++ +YV C  + DAR VFD M  ++ 
Sbjct: 44  LQSCTKKNALPEGKLIHAHINERAPAKDTFLHNSLIMMYVRCRNLTDARKVFDRMPERDD 103

Query: 403 FVYNTLIKGYAENNLPEESLRLYTDMADQGVRPDKFTF 516
           F +N +I  Y ++ + EE+LR++  M   G+ P+ FTF
Sbjct: 104 FSWNVMIAAYTKHGIAEEALRMFYQMQRTGIEPNSFTF 141


>gb|AFG45729.1| hypothetical protein 0_12933_01, partial [Pinus taeda]
          Length = 147

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 36/98 (36%), Positives = 53/98 (54%)
 Frame = +1

Query: 223 LDQCMNRRLLLEGMKVHAHITVRGFTGKKPLINKVLAVYVNCNRMVDARHVFDEMQWKNT 402
           L  C  +  L EG  +HAHI  R       L N ++ +YV C  + DAR VFD M  ++ 
Sbjct: 44  LQSCTKKNALPEGKLIHAHINERAPATDTFLHNSLIMMYVRCRNLTDARKVFDRMPERDD 103

Query: 403 FVYNTLIKGYAENNLPEESLRLYTDMADQGVRPDKFTF 516
           F +N +I  Y ++ + EE LR++  M   G+ P+ FTF
Sbjct: 104 FSWNVMIAAYTKHGIAEEGLRMFYQMQRTGIEPNSFTF 141


>ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297322593|gb|EFH53014.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 597

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 40/84 (47%), Positives = 51/84 (60%)
 Frame = +1

Query: 265 KVHAHITVRGFTGKKPLINKVLAVYVNCNRMVDARHVFDEMQWKNTFVYNTLIKGYAENN 444
           K+HA +   GF+ K  L+ ++L   V    M  AR VFDEM     F++NTL KGY  N 
Sbjct: 29  KIHAVVIRTGFSEKNSLLTQLLENLVLVGDMCYARQVFDEMPKPRIFLWNTLFKGYVRNQ 88

Query: 445 LPEESLRLYTDMADQGVRPDKFTF 516
           LP ES+ LY  M D GVRPD+FT+
Sbjct: 89  LPFESVLLYKKMRDLGVRPDEFTY 112


>ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g25270, chloroplastic-like [Cucumis sativus]
          Length = 489

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 7/136 (5%)
 Frame = +1

Query: 130 KPLWRKNHQSMSAFTT-----LDNNQRVSIENLMHHLDQCMNRRLLLEGMKVHAHITVRG 294
           KP ++   Q++ A  T     +DN   +  E     L+ C   + +  G+++H  I    
Sbjct: 25  KPFFQSKIQALDAVLTDLEASIDNGLFIDPEIFSSLLELCYQLQAIHHGIRIHRLIPTNL 84

Query: 295 FTGKKPLINKVLAVYVNCNRMVDARHVFDEMQWKN--TFVYNTLIKGYAENNLPEESLRL 468
                 + +K+L +Y +   M DA  VFDEM  +N   F +N+LI GYAE  L E++L L
Sbjct: 85  LRRNVGISSKLLRLYASFGYMEDAHQVFDEMGNRNFSAFAWNSLISGYAELGLYEDALAL 144

Query: 469 YTDMADQGVRPDKFTF 516
           Y  M ++GV PD FTF
Sbjct: 145 YFQMEEEGVEPDNFTF 160



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 27/82 (32%), Positives = 48/82 (58%)
 Frame = +1

Query: 259 GMKVHAHITVRGFTGKKPLINKVLAVYVNCNRMVDARHVFDEMQWKNTFVYNTLIKGYAE 438
           G  VH H+   GF G   ++N ++ +Y  C  +V AR VFD++++K+   +N+++ GY  
Sbjct: 176 GEAVHRHVVRSGFAGDVFVLNALVDMYSKCGCIVRARKVFDQIEYKDIVSWNSMLTGYTR 235

Query: 439 NNLPEESLRLYTDMADQGVRPD 504
           + L  E+L ++  M  +G  PD
Sbjct: 236 HGLHFEALDIFDQMIQEGYEPD 257


>ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Cucumis sativus]
          Length = 489

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 7/136 (5%)
 Frame = +1

Query: 130 KPLWRKNHQSMSAFTT-----LDNNQRVSIENLMHHLDQCMNRRLLLEGMKVHAHITVRG 294
           KP ++   Q++ A  T     +DN   +  E     L+ C   + +  G+++H  I    
Sbjct: 25  KPFFQSKIQALDAVLTDLEASIDNGLFIDPEIFSSLLELCYQLQAIHHGIRIHRLIPTNL 84

Query: 295 FTGKKPLINKVLAVYVNCNRMVDARHVFDEMQWKN--TFVYNTLIKGYAENNLPEESLRL 468
                 + +K+L +Y +   M DA  VFDEM  +N   F +N+LI GYAE  L E++L L
Sbjct: 85  LRRNVGISSKLLRLYASFGYMEDAHQVFDEMGNRNFSAFAWNSLISGYAELGLYEDALAL 144

Query: 469 YTDMADQGVRPDKFTF 516
           Y  M ++GV PD FTF
Sbjct: 145 YFQMEEEGVEPDNFTF 160



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 27/82 (32%), Positives = 48/82 (58%)
 Frame = +1

Query: 259 GMKVHAHITVRGFTGKKPLINKVLAVYVNCNRMVDARHVFDEMQWKNTFVYNTLIKGYAE 438
           G  VH H+   GF G   ++N ++ +Y  C  +V AR VFD++++K+   +N+++ GY  
Sbjct: 176 GEAVHRHVVRSGFAGDVFVLNALVDMYSKCGCIVRARKVFDQIEYKDIVSWNSMLTGYTR 235

Query: 439 NNLPEESLRLYTDMADQGVRPD 504
           + L  E+L ++  M  +G  PD
Sbjct: 236 HGLHFEALDIFDQMIQEGYEPD 257


>gb|AFG45724.1| hypothetical protein 0_12933_01, partial [Pinus taeda]
          Length = 147

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 35/98 (35%), Positives = 54/98 (55%)
 Frame = +1

Query: 223 LDQCMNRRLLLEGMKVHAHITVRGFTGKKPLINKVLAVYVNCNRMVDARHVFDEMQWKNT 402
           L  C  +  L EG  +HAHI  R       L N ++ +YV C  + DAR +FD M  ++ 
Sbjct: 44  LQSCTKKNALPEGKLIHAHINERAPATDTFLHNSLIIMYVRCGNLTDARKLFDRMPERDD 103

Query: 403 FVYNTLIKGYAENNLPEESLRLYTDMADQGVRPDKFTF 516
           F +N +I  Y ++ + EE+LR++  M   G+ P+ FTF
Sbjct: 104 FSWNVMIAAYTKHGIAEEALRMFYQMQRTGIEPNSFTF 141


>gb|AFG45722.1| hypothetical protein 0_12933_01, partial [Pinus taeda]
          Length = 147

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 35/98 (35%), Positives = 54/98 (55%)
 Frame = +1

Query: 223 LDQCMNRRLLLEGMKVHAHITVRGFTGKKPLINKVLAVYVNCNRMVDARHVFDEMQWKNT 402
           L  C  +  L EG  +HAHI  R       L N ++ +YV C  + DAR +FD M  ++ 
Sbjct: 44  LQSCTKKNALPEGKLIHAHINERAPATDTFLHNSLIMMYVRCGNLTDARKLFDRMPERDD 103

Query: 403 FVYNTLIKGYAENNLPEESLRLYTDMADQGVRPDKFTF 516
           F +N +I  Y ++ + EE+LR++  M   G+ P+ FTF
Sbjct: 104 FSWNVMIAAYTKHGIAEEALRMFYQMQRTGIEPNSFTF 141


>gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 37/98 (37%), Positives = 56/98 (57%)
 Frame = +1

Query: 223 LDQCMNRRLLLEGMKVHAHITVRGFTGKKPLINKVLAVYVNCNRMVDARHVFDEMQWKNT 402
           L  C+  + L  G +VH HI   G      +IN +L +YV+C  + +AR +FD+   K+ 
Sbjct: 51  LQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSV 110

Query: 403 FVYNTLIKGYAENNLPEESLRLYTDMADQGVRPDKFTF 516
             +N +I GYA   L +E+  L+T M  +G+ PDKFTF
Sbjct: 111 VSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTF 148



 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 32/98 (32%), Positives = 50/98 (51%)
 Frame = +1

Query: 223 LDQCMNRRLLLEGMKVHAHITVRGFTGKKPLINKVLAVYVNCNRMVDARHVFDEMQWKNT 402
           L  C +   L  G +VH  +   G      + N ++++Y  C  + DAR VFD M  ++ 
Sbjct: 152 LSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDE 211

Query: 403 FVYNTLIKGYAENNLPEESLRLYTDMADQGVRPDKFTF 516
             + TL   YAE+   +ESL+ Y  M  +GVRP + T+
Sbjct: 212 VSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITY 249



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 4/125 (3%)
 Frame = +1

Query: 154 QSMSAFTTLDNNQRVSIE----NLMHHLDQCMNRRLLLEGMKVHAHITVRGFTGKKPLIN 321
           Q + +F+T     +  +E      M  L  C N   L  G ++HA +   G      + N
Sbjct: 428 QVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVAN 487

Query: 322 KVLAVYVNCNRMVDARHVFDEMQWKNTFVYNTLIKGYAENNLPEESLRLYTDMADQGVRP 501
            ++++Y  C  + DA  V + M  ++   +NTLI G A+N    E+L+ +  M  + +RP
Sbjct: 488 ALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRP 547

Query: 502 DKFTF 516
           +  TF
Sbjct: 548 NATTF 552


>ref|XP_001757146.1| predicted protein [Physcomitrella patens]
           gi|162691644|gb|EDQ78005.1| predicted protein
           [Physcomitrella patens]
          Length = 527

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 35/98 (35%), Positives = 57/98 (58%)
 Frame = +1

Query: 223 LDQCMNRRLLLEGMKVHAHITVRGFTGKKPLINKVLAVYVNCNRMVDARHVFDEMQWKNT 402
           L +C   + L    +VH  I   G      + NK++ VY+ C ++ DARHVFD++  KN 
Sbjct: 6   LQRCFKHKDLTSVKQVHDCILKSGMDQNPYVANKLMRVYIRCGKVQDARHVFDKLVKKNV 65

Query: 403 FVYNTLIKGYAENNLPEESLRLYTDMADQGVRPDKFTF 516
           F + T+I GYAE+  P +++ +Y  M  +G RP++ T+
Sbjct: 66  FNWTTMIGGYAEHGRPADAIEVYNQMRQEGGRPNEVTY 103



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 29/86 (33%), Positives = 48/86 (55%)
 Frame = +1

Query: 259 GMKVHAHITVRGFTGKKPLINKVLAVYVNCNRMVDARHVFDEMQWKNTFVYNTLIKGYAE 438
           G ++HAHI+  GF    P+   ++ +Y     + DAR VFDEM  +N   +N +I G A+
Sbjct: 119 GKEIHAHISHGGFRSDVPVQTALVNMYAKSGSIKDARLVFDEMAERNVITWNVMIGGLAQ 178

Query: 439 NNLPEESLRLYTDMADQGVRPDKFTF 516
           +   +E+  L+  M ++G  PD  T+
Sbjct: 179 HGFGQEAFSLFLQMQEEGFVPDSTTY 204


>ref|XP_002974330.1| hypothetical protein SELMODRAFT_50864 [Selaginella moellendorffii]
           gi|300157928|gb|EFJ24552.1| hypothetical protein
           SELMODRAFT_50864 [Selaginella moellendorffii]
          Length = 720

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 37/97 (38%), Positives = 59/97 (60%)
 Frame = +1

Query: 223 LDQCMNRRLLLEGMKVHAHITVRGFTGKKPLINKVLAVYVNCNRMVDARHVFDEMQWKNT 402
           LD C++ + L +G  VHA +T  GF     L N ++ +Y  C+   DAR+VFD M  +++
Sbjct: 1   LDACVSLKALSDGRDVHASVTRHGFGSDLVLGNALINMYSKCSSPADARNVFDGMTVRDS 60

Query: 403 FVYNTLIKGYAENNLPEESLRLYTDMADQGVRPDKFT 513
             +NT+I  YA N   EE++ ++ +MA  G+ PDK+T
Sbjct: 61  VSWNTMIATYARNGFGEEAVEVFHEMALVGIPPDKYT 97


>ref|XP_006290812.1| hypothetical protein CARUB_v10016917mg [Capsella rubella]
           gi|482559519|gb|EOA23710.1| hypothetical protein
           CARUB_v10016917mg [Capsella rubella]
          Length = 584

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 38/84 (45%), Positives = 53/84 (63%)
 Frame = +1

Query: 265 KVHAHITVRGFTGKKPLINKVLAVYVNCNRMVDARHVFDEMQWKNTFVYNTLIKGYAENN 444
           K+HA +   GF+ K  L+ ++L   V    M  AR +FDEM     F++N+L KGY +N+
Sbjct: 29  KIHAIVLRTGFSEKNSLLTQLLENLVLLGDMCYARQLFDEMHKPRIFLWNSLFKGYVKNH 88

Query: 445 LPEESLRLYTDMADQGVRPDKFTF 516
           LP ES+ LY  M D GVRPD+FT+
Sbjct: 89  LPFESVLLYKKMRDLGVRPDEFTY 112


>ref|XP_002526753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533942|gb|EEF35667.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 818

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 33/97 (34%), Positives = 55/97 (56%)
 Frame = +1

Query: 223 LDQCMNRRLLLEGMKVHAHITVRGFTGKKPLINKVLAVYVNCNRMVDARHVFDEMQWKNT 402
           L++C+N + + EG +VHAHI    +     L  +++  Y  C+ ++DARHVFDEM  +N 
Sbjct: 482 LNECVNNKAIREGQRVHAHIIKTYYLPSVYLRTRLIVFYTKCDLLMDARHVFDEMSERNV 541

Query: 403 FVYNTLIKGYAENNLPEESLRLYTDMADQGVRPDKFT 513
             +  +I GY+      E+L L+  M    + P++FT
Sbjct: 542 VSWTAMISGYSRRGFAFETLHLFVRMLRSDIEPNEFT 578


>ref|XP_006361605.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Solanum tuberosum]
          Length = 602

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 36/98 (36%), Positives = 57/98 (58%)
 Frame = +1

Query: 223 LDQCMNRRLLLEGMKVHAHITVRGFTGKKPLINKVLAVYVNCNRMVDARHVFDEMQWKNT 402
           L  C+ R+ +  G ++HAH+ + G      L  K++ +Y  C+++ +A H+FD +   N 
Sbjct: 36  LQSCIGRKAVEPGKQLHAHLCLTGLGYNINLATKLVNLYSVCDKLPNAHHLFDRIPKGNI 95

Query: 403 FVYNTLIKGYAENNLPEESLRLYTDMADQGVRPDKFTF 516
           F++N LI+GYA N   E ++ LY  M D G  PD FTF
Sbjct: 96  FLWNVLIRGYAWNGPYEAAISLYYQMIDYGHVPDNFTF 133