BLASTX nr result
ID: Ephedra28_contig00024025
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00024025
(1331 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006837406.1| hypothetical protein AMTR_s00111p00144160 [A... 93 2e-16
ref|XP_002304341.2| zinc finger family protein [Populus trichoca... 87 1e-14
ref|XP_004509736.1| PREDICTED: zinc finger CCCH domain-containin... 85 6e-14
gb|EOY23964.1| Nucleic acid binding protein, putative [Theobroma... 85 8e-14
gb|ESW28409.1| hypothetical protein PHAVU_003G284200g [Phaseolus... 83 3e-13
ref|XP_006368387.1| zinc finger family protein [Populus trichoca... 82 4e-13
ref|XP_002326730.1| predicted protein [Populus trichocarpa] 82 4e-13
ref|XP_002527651.1| nucleic acid binding protein, putative [Rici... 81 9e-13
ref|XP_003516789.1| PREDICTED: zinc finger CCCH domain-containin... 80 2e-12
ref|XP_002445099.1| hypothetical protein SORBIDRAFT_07g004075 [S... 80 3e-12
ref|XP_004972781.1| PREDICTED: zinc finger CCCH domain-containin... 79 6e-12
ref|NP_001061044.1| Os08g0159800 [Oryza sativa Japonica Group] g... 78 1e-11
ref|XP_006445697.1| hypothetical protein CICLE_v10015789mg [Citr... 78 1e-11
gb|EAZ41590.1| hypothetical protein OsJ_26123 [Oryza sativa Japo... 78 1e-11
gb|EAZ05671.1| hypothetical protein OsI_27900 [Oryza sativa Indi... 78 1e-11
gb|AFW57264.1| hypothetical protein ZEAMMB73_056446 [Zea mays] 77 1e-11
ref|NP_001131826.1| uncharacterized protein LOC100193200 [Zea ma... 77 1e-11
ref|XP_003628788.1| Zinc finger CCCH domain-containing protein [... 77 2e-11
gb|EXB64915.1| Zinc finger CCCH domain-containing protein 56 [Mo... 76 3e-11
ref|XP_006659856.1| PREDICTED: zinc finger CCCH domain-containin... 75 5e-11
>ref|XP_006837406.1| hypothetical protein AMTR_s00111p00144160 [Amborella trichopoda]
gi|548840024|gb|ERN00260.1| hypothetical protein
AMTR_s00111p00144160 [Amborella trichopoda]
Length = 372
Score = 93.2 bits (230), Expect = 2e-16
Identities = 44/94 (46%), Positives = 65/94 (69%)
Frame = -2
Query: 1330 KYGGGLPDAEAIDASASLRNDAKQNGSASKAHVEAVAGQASSLFNSENYVIGSSARTIGN 1151
+YGGGL + E D+S ++ +D+K N ++SK +AV G +S+ + + Y +G ++ +
Sbjct: 277 RYGGGLVEMEGRDSS-TVPSDSKINTASSKVQTDAVTGSMASIPHMDTYHVGLQSQRSVS 335
Query: 1150 ILSQRSGQRIMPKWKGPDKISRIYGDWIEDNEWE 1049
L+QR G + KWKGPDKISRIYGDWI+DNEWE
Sbjct: 336 SLNQRQGLKPFQKWKGPDKISRIYGDWIDDNEWE 369
>ref|XP_002304341.2| zinc finger family protein [Populus trichocarpa]
gi|550342801|gb|EEE79320.2| zinc finger family protein
[Populus trichocarpa]
Length = 369
Score = 87.4 bits (215), Expect = 1e-14
Identities = 48/92 (52%), Positives = 62/92 (67%)
Frame = -2
Query: 1330 KYGGGLPDAEAIDASASLRNDAKQNGSASKAHVEAVAGQASSLFNSENYVIGSSARTIGN 1151
+YGGGL D EA D+S S+ ++KQ G SK E +S+ +S+ Y +G S++ +
Sbjct: 280 RYGGGLVDTEAKDSS-SVPVESKQGGMPSKTPPETAVASVTSVPHSDVYHLGVSSQR-SS 337
Query: 1150 ILSQRSGQRIMPKWKGPDKISRIYGDWIEDNE 1055
IL QRSGQR KWKGPDKISRIYGDWI+D E
Sbjct: 338 ILIQRSGQRTHEKWKGPDKISRIYGDWIDDIE 369
>ref|XP_004509736.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like [Cicer
arietinum]
Length = 381
Score = 85.1 bits (209), Expect = 6e-14
Identities = 44/92 (47%), Positives = 62/92 (67%)
Frame = -2
Query: 1330 KYGGGLPDAEAIDASASLRNDAKQNGSASKAHVEAVAGQASSLFNSENYVIGSSARTIGN 1151
+YGGGL + E+ D ++++ ++AKQ G SK H + V + +S+ Y IG ++ +
Sbjct: 292 RYGGGLMEGESRDTASAVASEAKQ-GVPSKTHADNVVASTPPIAHSDVYHIGVPSQR-PS 349
Query: 1150 ILSQRSGQRIMPKWKGPDKISRIYGDWIEDNE 1055
I+SQR GQR KWKGPDKISRIYGDWI+D E
Sbjct: 350 IVSQRPGQRAHQKWKGPDKISRIYGDWIDDIE 381
>gb|EOY23964.1| Nucleic acid binding protein, putative [Theobroma cacao]
Length = 370
Score = 84.7 bits (208), Expect = 8e-14
Identities = 50/93 (53%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Frame = -2
Query: 1330 KYGGGLPDAEAIDASASLRNDAKQNGSASKAHVEAVAGQASSLFNSENYVIG-SSARTIG 1154
+YGGGL +AEA D+SA+ +D KQ G SK + VA A S+ S+ Y +G S RT
Sbjct: 281 RYGGGLVEAEAKDSSAT-PSDPKQGGVPSKTPADTVAVSAPSVPLSDVYHLGVPSQRT-- 337
Query: 1153 NILSQRSGQRIMPKWKGPDKISRIYGDWIEDNE 1055
+++ QR GQR KWKGPDKISRIYGDWI+D E
Sbjct: 338 SLVIQRPGQRAHQKWKGPDKISRIYGDWIDDIE 370
>gb|ESW28409.1| hypothetical protein PHAVU_003G284200g [Phaseolus vulgaris]
gi|561029770|gb|ESW28410.1| hypothetical protein
PHAVU_003G284200g [Phaseolus vulgaris]
Length = 376
Score = 82.8 bits (203), Expect = 3e-13
Identities = 42/92 (45%), Positives = 60/92 (65%)
Frame = -2
Query: 1330 KYGGGLPDAEAIDASASLRNDAKQNGSASKAHVEAVAGQASSLFNSENYVIGSSARTIGN 1151
+YGGGL + E+ D + + +D + G+ASKA + V + + +S+ Y IG ++ +
Sbjct: 286 RYGGGLMEGESRDGGSVVGSDTSK-GAASKASADNVVAAVTPVAHSDVYHIGVPSQRPSS 344
Query: 1150 ILSQRSGQRIMPKWKGPDKISRIYGDWIEDNE 1055
I+ QR GQR KWKGPDKISRIYGDWI+D E
Sbjct: 345 IVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 376
>ref|XP_006368387.1| zinc finger family protein [Populus trichocarpa]
gi|550346300|gb|ERP64956.1| zinc finger family protein
[Populus trichocarpa]
Length = 377
Score = 82.4 bits (202), Expect = 4e-13
Identities = 46/92 (50%), Positives = 60/92 (65%)
Frame = -2
Query: 1330 KYGGGLPDAEAIDASASLRNDAKQNGSASKAHVEAVAGQASSLFNSENYVIGSSARTIGN 1151
+YGGGL + +A D SA + ++KQ G SK E V +S+ NS+ Y +G ++ +
Sbjct: 288 RYGGGLVEMDAKD-SAFVPVESKQGGVPSKTPPETVVASVTSVPNSDVYHLGVPSQK-SS 345
Query: 1150 ILSQRSGQRIMPKWKGPDKISRIYGDWIEDNE 1055
IL QR GQR KWKGPDKISRIYGDWI+D E
Sbjct: 346 ILIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 377
>ref|XP_002326730.1| predicted protein [Populus trichocarpa]
Length = 372
Score = 82.4 bits (202), Expect = 4e-13
Identities = 46/92 (50%), Positives = 60/92 (65%)
Frame = -2
Query: 1330 KYGGGLPDAEAIDASASLRNDAKQNGSASKAHVEAVAGQASSLFNSENYVIGSSARTIGN 1151
+YGGGL + +A D SA + ++KQ G SK E V +S+ NS+ Y +G ++ +
Sbjct: 283 RYGGGLVEMDAKD-SAFVPVESKQGGVPSKTPPETVVASVTSVPNSDVYHLGVPSQK-SS 340
Query: 1150 ILSQRSGQRIMPKWKGPDKISRIYGDWIEDNE 1055
IL QR GQR KWKGPDKISRIYGDWI+D E
Sbjct: 341 ILIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 372
>ref|XP_002527651.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223532956|gb|EEF34722.1| nucleic acid binding protein,
putative [Ricinus communis]
Length = 349
Score = 81.3 bits (199), Expect = 9e-13
Identities = 45/92 (48%), Positives = 59/92 (64%)
Frame = -2
Query: 1330 KYGGGLPDAEAIDASASLRNDAKQNGSASKAHVEAVAGQASSLFNSENYVIGSSARTIGN 1151
+YGGGL ++E D S S+ D KQ G SK + V +S+ +S+ Y +G ++ +
Sbjct: 260 RYGGGLMESEGKDPS-SVPADTKQGGVLSKTPADIVVASVASVPHSDVYHLGVPSQR-PS 317
Query: 1150 ILSQRSGQRIMPKWKGPDKISRIYGDWIEDNE 1055
IL QR GQR KWKGPDKISRIYGDWI+D E
Sbjct: 318 ILMQRPGQRSHQKWKGPDKISRIYGDWIDDIE 349
>ref|XP_003516789.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like isoform
X1 [Glycine max] gi|571434461|ref|XP_006573203.1|
PREDICTED: zinc finger CCCH domain-containing protein
12-like isoform X2 [Glycine max]
Length = 368
Score = 80.1 bits (196), Expect = 2e-12
Identities = 41/92 (44%), Positives = 59/92 (64%)
Frame = -2
Query: 1330 KYGGGLPDAEAIDASASLRNDAKQNGSASKAHVEAVAGQASSLFNSENYVIGSSARTIGN 1151
+YGGGL + E DA++++ D + G SKA + V + + +S+ Y IG ++ +
Sbjct: 278 RYGGGLMEGENRDAASAVAGDTNK-GVPSKASADNVVAAVTLVAHSDVYHIGVPSQRPSS 336
Query: 1150 ILSQRSGQRIMPKWKGPDKISRIYGDWIEDNE 1055
++ QR GQR KWKGPDKISRIYGDWI+D E
Sbjct: 337 MVIQRPGQRAHQKWKGPDKISRIYGDWIDDIE 368
>ref|XP_002445099.1| hypothetical protein SORBIDRAFT_07g004075 [Sorghum bicolor]
gi|241941449|gb|EES14594.1| hypothetical protein
SORBIDRAFT_07g004075 [Sorghum bicolor]
Length = 115
Score = 79.7 bits (195), Expect = 3e-12
Identities = 43/94 (45%), Positives = 64/94 (68%), Gaps = 2/94 (2%)
Frame = -2
Query: 1330 KYGGGLPDAEAIDASASLRNDAKQNGSASKAHVEAVAGQASSLFNSENYVIGSSARTIGN 1151
KYGGGL D + D +++ D+KQ G+++KA ++ A + +++ Y +G ++
Sbjct: 25 KYGGGLMDVDGRDIAST--PDSKQAGASTKAPADSAAASTAMPPHADVYHLGIQSQR-ST 81
Query: 1150 ILSQRSGQ--RIMPKWKGPDKISRIYGDWIEDNE 1055
I+SQRSGQ R + KWKGPDKISRIYGDWI++NE
Sbjct: 82 IVSQRSGQLQRPIQKWKGPDKISRIYGDWIDENE 115
>ref|XP_004972781.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
[Setaria italica]
Length = 364
Score = 78.6 bits (192), Expect = 6e-12
Identities = 43/94 (45%), Positives = 64/94 (68%), Gaps = 2/94 (2%)
Frame = -2
Query: 1330 KYGGGLPDAEAIDASASLRNDAKQNGSASKAHVEAVAGQASSLFNSENYVIGSSARTIGN 1151
KYGGGL D + D +++ D+KQ G+++KA ++ A + +++ Y +G ++ N
Sbjct: 274 KYGGGLVDIDGRDVAST--PDSKQAGASAKAPADSAAASTAIPPHADVYHLGIQSQRSTN 331
Query: 1150 ILSQRSGQ--RIMPKWKGPDKISRIYGDWIEDNE 1055
L+QRSGQ R + KWKGPDKISRIYGDWI++NE
Sbjct: 332 -LNQRSGQVQRPIQKWKGPDKISRIYGDWIDENE 364
>ref|NP_001061044.1| Os08g0159800 [Oryza sativa Japonica Group]
gi|75243377|sp|Q84UQ3.1|C3H56_ORYSJ RecName: Full=Zinc
finger CCCH domain-containing protein 56; Short=OsC3H56
gi|29467558|dbj|BAC66728.1| putative zinc finger protein
[Oryza sativa Japonica Group] gi|37806157|dbj|BAC99662.1|
putative zinc finger protein [Oryza sativa Japonica
Group] gi|113623013|dbj|BAF22958.1| Os08g0159800 [Oryza
sativa Japonica Group]
Length = 367
Score = 77.8 bits (190), Expect = 1e-11
Identities = 45/94 (47%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Frame = -2
Query: 1330 KYGGGLPDAEAIDASASLRNDAKQNGSASKAHVEAVAGQASSLFNSENYVIGSSARTIGN 1151
KYGGGL D ++ DA+A+ D+KQ ++KA E A + L +++ Y +G A+
Sbjct: 277 KYGGGLVDIDSRDAAAT--PDSKQAVVSAKAPAETAAASTTVLPHADVYHLGVQAQR-ST 333
Query: 1150 ILSQRSGQ--RIMPKWKGPDKISRIYGDWIEDNE 1055
I QRSGQ R + KWKGPDKISRIYGDWI++ E
Sbjct: 334 IAGQRSGQVQRPIQKWKGPDKISRIYGDWIDETE 367
>ref|XP_006445697.1| hypothetical protein CICLE_v10015789mg [Citrus clementina]
gi|568864314|ref|XP_006485547.1| PREDICTED: zinc finger
CCCH domain-containing protein 12-like [Citrus sinensis]
gi|557548308|gb|ESR58937.1| hypothetical protein
CICLE_v10015789mg [Citrus clementina]
Length = 349
Score = 77.8 bits (190), Expect = 1e-11
Identities = 43/92 (46%), Positives = 62/92 (67%)
Frame = -2
Query: 1330 KYGGGLPDAEAIDASASLRNDAKQNGSASKAHVEAVAGQASSLFNSENYVIGSSARTIGN 1151
++GGGL ++E D+SA+ +DAK G SK V+ V +S+ +++ Y +G ++ +
Sbjct: 260 RFGGGLLESENKDSSAA-PSDAKLVGVPSKTPVDTVVASVTSVPHADVYHMGVPSQR-SS 317
Query: 1150 ILSQRSGQRIMPKWKGPDKISRIYGDWIEDNE 1055
I+ QR GQR KWKGPDKISRIYGDWI+D E
Sbjct: 318 IVVQRPGQRSHKKWKGPDKISRIYGDWIDDIE 349
>gb|EAZ41590.1| hypothetical protein OsJ_26123 [Oryza sativa Japonica Group]
Length = 367
Score = 77.8 bits (190), Expect = 1e-11
Identities = 45/94 (47%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Frame = -2
Query: 1330 KYGGGLPDAEAIDASASLRNDAKQNGSASKAHVEAVAGQASSLFNSENYVIGSSARTIGN 1151
KYGGGL D ++ DA+A+ D+KQ ++KA E A + L +++ Y +G A+
Sbjct: 277 KYGGGLVDIDSRDAAAT--PDSKQAVVSAKAPAETAAASTTVLPHADVYHLGVQAQR-ST 333
Query: 1150 ILSQRSGQ--RIMPKWKGPDKISRIYGDWIEDNE 1055
I QRSGQ R + KWKGPDKISRIYGDWI++ E
Sbjct: 334 IAGQRSGQVQRPIQKWKGPDKISRIYGDWIDETE 367
>gb|EAZ05671.1| hypothetical protein OsI_27900 [Oryza sativa Indica Group]
Length = 367
Score = 77.8 bits (190), Expect = 1e-11
Identities = 45/94 (47%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Frame = -2
Query: 1330 KYGGGLPDAEAIDASASLRNDAKQNGSASKAHVEAVAGQASSLFNSENYVIGSSARTIGN 1151
KYGGGL D ++ DA+A+ D+KQ ++KA E A + L +++ Y +G A+
Sbjct: 277 KYGGGLVDIDSRDAAAT--PDSKQAVVSAKAPAETTAASTTVLPHADVYHLGVQAQR-ST 333
Query: 1150 ILSQRSGQ--RIMPKWKGPDKISRIYGDWIEDNE 1055
I QRSGQ R + KWKGPDKISRIYGDWI++ E
Sbjct: 334 IAGQRSGQVQRPIQKWKGPDKISRIYGDWIDETE 367
>gb|AFW57264.1| hypothetical protein ZEAMMB73_056446 [Zea mays]
Length = 363
Score = 77.4 bits (189), Expect = 1e-11
Identities = 44/94 (46%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
Frame = -2
Query: 1330 KYGGGLPDAEAIDASASLRNDAKQNGSASKAHVEAVAGQASSLFNSENYVIGSSARTIGN 1151
KYGGGL D + D ++ D+KQ G ++KA +E+ A + +++ Y +G ++
Sbjct: 273 KYGGGLVDIDGRDILST--PDSKQAGGSAKAPLESAAASTALPPHADVYHLGIQSQRSA- 329
Query: 1150 ILSQRSGQ--RIMPKWKGPDKISRIYGDWIEDNE 1055
I SQRSGQ R + KWKGPDKISRIYGDWI++NE
Sbjct: 330 IASQRSGQLQRPIQKWKGPDKISRIYGDWIDENE 363
>ref|NP_001131826.1| uncharacterized protein LOC100193200 [Zea mays]
gi|194692650|gb|ACF80409.1| unknown [Zea mays]
gi|195628590|gb|ACG36125.1| zinc finger C-x8-C-x5-C-x3-H
type family protein [Zea mays]
gi|224031423|gb|ACN34787.1| unknown [Zea mays]
gi|407232606|gb|AFT82645.1| C3H31 transcription factor,
partial [Zea mays subsp. mays]
gi|413917333|gb|AFW57265.1| putative Zinc finger
C-x8-C-x5-C-x3-H type family protein [Zea mays]
gi|413917334|gb|AFW57266.1| putative Zinc finger
C-x8-C-x5-C-x3-H type family protein [Zea mays]
Length = 359
Score = 77.4 bits (189), Expect = 1e-11
Identities = 44/94 (46%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
Frame = -2
Query: 1330 KYGGGLPDAEAIDASASLRNDAKQNGSASKAHVEAVAGQASSLFNSENYVIGSSARTIGN 1151
KYGGGL D + D ++ D+KQ G ++KA +E+ A + +++ Y +G ++
Sbjct: 269 KYGGGLVDIDGRDILST--PDSKQAGGSAKAPLESAAASTALPPHADVYHLGIQSQRSA- 325
Query: 1150 ILSQRSGQ--RIMPKWKGPDKISRIYGDWIEDNE 1055
I SQRSGQ R + KWKGPDKISRIYGDWI++NE
Sbjct: 326 IASQRSGQLQRPIQKWKGPDKISRIYGDWIDENE 359
>ref|XP_003628788.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355522810|gb|AET03264.1| Zinc finger CCCH
domain-containing protein [Medicago truncatula]
Length = 376
Score = 77.0 bits (188), Expect = 2e-11
Identities = 43/92 (46%), Positives = 58/92 (63%)
Frame = -2
Query: 1330 KYGGGLPDAEAIDASASLRNDAKQNGSASKAHVEAVAGQASSLFNSENYVIGSSARTIGN 1151
+YGGGL + E+ D + + +D KQ G SK H + V + S+ Y +G ++ +
Sbjct: 288 RYGGGLMEGESRDGVSVVASDTKQ-GVPSKTHADNVVASNPPI-GSDVYHLGVPSQR-PS 344
Query: 1150 ILSQRSGQRIMPKWKGPDKISRIYGDWIEDNE 1055
I+SQR GQR KWKGPDKISRIYGDWI+D E
Sbjct: 345 IVSQRPGQRAHQKWKGPDKISRIYGDWIDDFE 376
>gb|EXB64915.1| Zinc finger CCCH domain-containing protein 56 [Morus notabilis]
Length = 361
Score = 76.3 bits (186), Expect = 3e-11
Identities = 41/92 (44%), Positives = 54/92 (58%)
Frame = -2
Query: 1330 KYGGGLPDAEAIDASASLRNDAKQNGSASKAHVEAVAGQASSLFNSENYVIGSSARTIGN 1151
+YGGGL + EA D+S+ G K + V S+ +S+ Y IG ++ +
Sbjct: 271 RYGGGLVETEARDSSSVPAESKPPGGVPPKTPADTVVASVPSVPHSDVYHIGVPSQR-SS 329
Query: 1150 ILSQRSGQRIMPKWKGPDKISRIYGDWIEDNE 1055
I+ QR GQR KWKGPDKISRIYGDWI+D E
Sbjct: 330 IVIQRPGQRANQKWKGPDKISRIYGDWIDDIE 361
>ref|XP_006659856.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like [Oryza
brachyantha]
Length = 320
Score = 75.5 bits (184), Expect = 5e-11
Identities = 41/94 (43%), Positives = 63/94 (67%), Gaps = 2/94 (2%)
Frame = -2
Query: 1330 KYGGGLPDAEAIDASASLRNDAKQNGSASKAHVEAVAGQASSLFNSENYVIGSSARTIGN 1151
KYGGGL D ++ DA+++ D+KQ +++KA + ++ +++ Y +G A+
Sbjct: 230 KYGGGLVDLDSRDAAST--PDSKQAAASAKAPTDTAIASTAAPPHADVYHLGVQAQR-ST 286
Query: 1150 ILSQRSGQ--RIMPKWKGPDKISRIYGDWIEDNE 1055
I++QRSGQ R + KWKGPDKISRIYGDWI++ E
Sbjct: 287 IVNQRSGQVQRPIQKWKGPDKISRIYGDWIDETE 320