BLASTX nr result

ID: Ephedra28_contig00023988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00023988
         (407 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK23029.1| unknown [Picea sitchensis]                              70   4e-10
gb|ABK26547.1| unknown [Picea sitchensis]                              56   4e-06

>gb|ABK23029.1| unknown [Picea sitchensis]
          Length = 394

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 37/102 (36%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
 Frame = -3

Query: 399 TTEEFCKIVETEGSFDTKEARCVAGIDAHVESHVKKGEEVGFGVSLERRFRSLFESVVAA 220
           + EE   IVETE SF+ K  R ++G   H    V++GEE  FG  + + +R+LFE++V A
Sbjct: 293 SVEELRSIVETENSFEIKSVRVLSGFPLHPLLEVREGEEQMFGRIVGKHYRALFENIVGA 352

Query: 219 NLR-DEGLVNDLYGRLRRRATTHPQSFIHDKVALLAISLTRK 97
           +LR DE L+++ + R+  RA      ++ + + L+ + L RK
Sbjct: 353 HLRWDEYLIDEFFARIANRAAAKYGEYLPNTLDLVTVFLLRK 394


>gb|ABK26547.1| unknown [Picea sitchensis]
          Length = 389

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
 Frame = -3

Query: 393 EEFCKIVETEGSFDTKEA-RCVAGIDAHVESHVKKGEEVGFGVSLERRFRSLFESVVAAN 217
           EE   IV+ E SF+  E+ +  +G+  H  S V KG+E  FG  +   +R+ FE++V A 
Sbjct: 290 EELESIVKMEKSFEIVESVKLFSGLPLHPFSEVSKGDEEMFGRMVTNSYRAAFENLVRAQ 349

Query: 216 LRDEGLVNDLYGRLRRRATTHPQSFIHDKVALLAISLTRK 97
           L  + L N+ Y R+ + AT   Q ++  +   L   L RK
Sbjct: 350 LDSDVLTNEFYLRIEKMATAKCQEYLRHRGDQLVAFLVRK 389


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