BLASTX nr result

ID: Ephedra28_contig00023939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00023939
         (499 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006339214.1| PREDICTED: protein PHYTOCHROME KINASE SUBSTR...    59   7e-07
ref|XP_004249767.1| PREDICTED: protein PHYTOCHROME KINASE SUBSTR...    58   1e-06
ref|XP_002307155.1| phytochrome kinase substrate-related family ...    58   1e-06
ref|XP_002266745.1| PREDICTED: protein PHYTOCHROME KINASE SUBSTR...    57   3e-06

>ref|XP_006339214.1| PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 4-like [Solanum
           tuberosum]
          Length = 497

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 4/168 (2%)
 Frame = +2

Query: 5   MLESANNRGNAKSRRRNSHDSEISVFEAENYFHATDNEDKNMKNSSLNGLLKTRSEKEKD 184
           +L+ A+     K    +  DSEI+VF+A+ YF +  NE  ++   ++N   +  S     
Sbjct: 25  ILKDASFSSYLKPEDHSVDDSEINVFDAKKYF-SEGNESSSVVKKNVNDQCELPSGHRHS 83

Query: 185 LITGNVNPIFEQKKQSLRSMSFRGVQGRYVTGTKTPSTPASCSDTSSWASHSVLLRKPKP 364
               +V+ +     ++ R+ SFR             +TP + S+ +SW S + LL  P  
Sbjct: 84  ----SVSSVDNAYGRNFRANSFR-------------ATPTASSE-ASWNSQTGLLANPPG 125

Query: 365 AGHNYNK--NTNSRKKSGFYGYG-FGCR-CPCAGKKAVDVEEPIQEPK 496
           A     K  NTN +K+  F     F CR CPC+GKK+V VEE   EP+
Sbjct: 126 AIAVSLKSINTNDKKRGSFSTRKWFFCRKCPCSGKKSVQVEEASSEPR 173


>ref|XP_004249767.1| PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 4-like [Solanum
           lycopersicum]
          Length = 493

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 4/168 (2%)
 Frame = +2

Query: 5   MLESANNRGNAKSRRRNSHDSEISVFEAENYFHATDNEDKNMKNSSLNGLLKTRSEKEKD 184
           +L+ A+     K    +  DSEI+VF+A+ YF +  NE   +   ++N   +  S     
Sbjct: 25  VLKDASFSSYLKPEDHSPDDSEINVFDAKKYF-SEGNESSPVAQKNVNDQCELPSGHRHS 83

Query: 185 LITGNVNPIFEQKKQSLRSMSFRGVQGRYVTGTKTPSTPASCSDTSSWASHSVLLRKPKP 364
               +V+ +     ++ R+ SFR             +TP + S+ +SW S + LL  P  
Sbjct: 84  ----SVSSVDNAYGRNFRANSFR-------------ATPTASSE-ASWNSQTGLLANPPG 125

Query: 365 AGHNYNKNTNSR-KKSGFYGYG--FGCR-CPCAGKKAVDVEEPIQEPK 496
           A     K+ N+  K+SG +     F CR CPC+GKK+V VEE   EP+
Sbjct: 126 AVSVSLKSINTNDKRSGSFNTRKWFFCRKCPCSGKKSVQVEEASSEPR 173


>ref|XP_002307155.1| phytochrome kinase substrate-related family protein [Populus
           trichocarpa] gi|118485620|gb|ABK94660.1| unknown
           [Populus trichocarpa] gi|222856604|gb|EEE94151.1|
           phytochrome kinase substrate-related family protein
           [Populus trichocarpa]
          Length = 551

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 48/150 (32%), Positives = 74/150 (49%), Gaps = 5/150 (3%)
 Frame = +2

Query: 62  DSEISVFEAENYFHATDNEDK-NMKNSSLNGLLKTRSEKEKDLITGNVNPIFEQKKQSLR 238
           DSEIS+F+A+ YF+ +  + K + + S +N  L+  SE+                + S  
Sbjct: 60  DSEISIFDAQKYFNESGGDTKLSRRVSPVNAKLERVSERYD---------FSSLPRLSSA 110

Query: 239 SMSFRGVQGRYVTGTKTPSTPASCSDTSSWASHSVLLRKPKPA----GHNYNKNTNSRKK 406
           S S  G  GR        +TP + S+ +SW S + LL  P  A      N  +N + RK 
Sbjct: 111 SSSVDGY-GRNYRARSFHATPTASSE-ASWNSQAGLLSNPPGAIAVSMRNPPRNDDKRKG 168

Query: 407 SGFYGYGFGCRCPCAGKKAVDVEEPIQEPK 496
           SG   +    +CPC+GKK+V +EE + EP+
Sbjct: 169 SGTK-WLLRRKCPCSGKKSVQIEEKLSEPR 197


>ref|XP_002266745.1| PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 4 [Vitis vinifera]
          Length = 550

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 38/148 (25%), Positives = 74/148 (50%)
 Frame = +2

Query: 56  SHDSEISVFEAENYFHATDNEDKNMKNSSLNGLLKTRSEKEKDLITGNVNPIFEQKKQSL 235
           + DSEIS+F+A+ YF+ + +E +  ++  +  +     E +    T +V+ + E   ++ 
Sbjct: 55  AEDSEISIFDAQKYFNES-SEHQQRESKRVAPVGAEHCESQFVTRTSSVSSV-EGYGRNY 112

Query: 236 RSMSFRGVQGRYVTGTKTPSTPASCSDTSSWASHSVLLRKPKPAGHNYNKNTNSRKKSGF 415
           R+ SF              +TP + S+ S  +   +L   P   G +     + +K    
Sbjct: 113 RARSFH-------------ATPTASSEASWNSQTGLLCNPPGTIGVSVRSIGSEKKNVSG 159

Query: 416 YGYGFGCRCPCAGKKAVDVEEPIQEPKA 499
             + FG +CPC+GKKAV+++E + EP++
Sbjct: 160 RKWFFGRKCPCSGKKAVEIQEKVSEPRS 187


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