BLASTX nr result
ID: Ephedra28_contig00023921
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00023921
(473 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006852744.1| hypothetical protein AMTR_s00033p00106440 [A... 60 2e-07
ref|XP_004291368.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltra... 59 9e-07
ref|XP_004238352.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltra... 58 1e-06
ref|XP_006342041.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltra... 57 3e-06
ref|XP_006342040.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltra... 57 3e-06
gb|EMJ23299.1| hypothetical protein PRUPE_ppa005656mg [Prunus pe... 57 3e-06
ref|XP_006435170.1| hypothetical protein CICLE_v10001119mg [Citr... 56 6e-06
ref|XP_006435169.1| hypothetical protein CICLE_v10001119mg [Citr... 56 6e-06
ref|XP_002307715.1| eukaryotic initiation factor 3 gamma subunit... 56 6e-06
gb|ESW32665.1| hypothetical protein PHAVU_001G007200g [Phaseolus... 55 7e-06
ref|XP_002510522.1| translation initiation factor, putative [Ric... 55 7e-06
gb|EOY15014.1| Eukaryotic initiation factor 3 gamma subunit fami... 55 1e-05
gb|EOY15012.1| Eukaryotic initiation factor 3 gamma subunit fami... 55 1e-05
ref|XP_002882030.1| eukaryotic initiation factor 3 gamma subunit... 55 1e-05
>ref|XP_006852744.1| hypothetical protein AMTR_s00033p00106440 [Amborella trichopoda]
gi|548856358|gb|ERN14211.1| hypothetical protein
AMTR_s00033p00106440 [Amborella trichopoda]
Length = 482
Score = 60.5 bits (145), Expect = 2e-07
Identities = 34/60 (56%), Positives = 37/60 (61%), Gaps = 8/60 (13%)
Frame = +2
Query: 317 SNIVSEVRKPS--------KAIRQADAGNIAHWTENGFSSLIVAAPENDPWNVIEELLPL 472
SN V E + PS K RQA I W ENGF+SLIVAAPE DPWN I+ELLPL
Sbjct: 344 SNSVDENKDPSSLKVSKSLKPGRQASEEEIKLWKENGFTSLIVAAPELDPWNAIQELLPL 403
>ref|XP_004291368.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic
subunit trm6-like [Fragaria vesca subsp. vesca]
Length = 451
Score = 58.5 bits (140), Expect = 9e-07
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Frame = +2
Query: 227 DSCTME----------IGKPSEAILHPNFSSDKKIEHETRSNIVSEVRKPSKAIRQADAG 376
DSC+ME +G + N +SD ++ T +++ + K +K +A
Sbjct: 289 DSCSMETESNEQISSTVGTEEVTLASENMTSDLIVD--TTNSVERKPSKSAKLGEKAPHD 346
Query: 377 NIAHWTENGFSSLIVAAPENDPWNVIEELLPL 472
I+ W ENGFSSLI+AAPE D W++++E+LPL
Sbjct: 347 IISMWKENGFSSLIIAAPELDTWSLVKEILPL 378
>ref|XP_004238352.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic
subunit trm6-like [Solanum lycopersicum]
Length = 446
Score = 57.8 bits (138), Expect = 1e-06
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Frame = +2
Query: 311 TRSNIVSEVRKPSKAIR---QADAGNIAHWTENGFSSLIVAAPENDPWNVIEELLPL 472
T + S + KP K+I+ +A I W ENGFSSLI+AAPE DPW +I+E+LPL
Sbjct: 311 TPERVSSPIIKPVKSIKAGQKATLEAIKSWKENGFSSLIIAAPELDPWGIIKEVLPL 367
>ref|XP_006342041.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic
subunit trm6-like isoform X2 [Solanum tuberosum]
Length = 446
Score = 57.0 bits (136), Expect = 3e-06
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Frame = +2
Query: 311 TRSNIVSEVRKPSKAIR---QADAGNIAHWTENGFSSLIVAAPENDPWNVIEELLPL 472
T + S + KP K+I+ +A I W ENGFSSLI+AAPE DPW +I+E+LPL
Sbjct: 311 TPERVPSPIIKPVKSIKPGQKAPLEAIKLWKENGFSSLIIAAPELDPWGIIKEVLPL 367
>ref|XP_006342040.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic
subunit trm6-like isoform X1 [Solanum tuberosum]
Length = 447
Score = 57.0 bits (136), Expect = 3e-06
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Frame = +2
Query: 311 TRSNIVSEVRKPSKAIR---QADAGNIAHWTENGFSSLIVAAPENDPWNVIEELLPL 472
T + S + KP K+I+ +A I W ENGFSSLI+AAPE DPW +I+E+LPL
Sbjct: 312 TPERVPSPIIKPVKSIKPGQKAPLEAIKLWKENGFSSLIIAAPELDPWGIIKEVLPL 368
>gb|EMJ23299.1| hypothetical protein PRUPE_ppa005656mg [Prunus persica]
Length = 449
Score = 56.6 bits (135), Expect = 3e-06
Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 9/97 (9%)
Frame = +2
Query: 209 PKSKFPDSCTMEIGKPSEAILHP------NFSSDKKIEH---ETRSNIVSEVRKPSKAIR 361
P S+ DSC ME + ++ I P + +S+ I E+ S+ V ++ KP+K
Sbjct: 282 PVSQDSDSCNME-SQSNDRISSPVSMEEVSLASENVISDLIPESTSSPVIKMSKPAKLGE 340
Query: 362 QADAGNIAHWTENGFSSLIVAAPENDPWNVIEELLPL 472
+A I+ W E+GFS LI+AAPE D W++++E+ PL
Sbjct: 341 KAPQEIISSWKEHGFSCLIIAAPELDTWSLVKEIFPL 377
>ref|XP_006435170.1| hypothetical protein CICLE_v10001119mg [Citrus clementina]
gi|557537292|gb|ESR48410.1| hypothetical protein
CICLE_v10001119mg [Citrus clementina]
Length = 452
Score = 55.8 bits (133), Expect = 6e-06
Identities = 39/131 (29%), Positives = 59/131 (45%)
Frame = +2
Query: 80 ETVHNVLHGDIDTPLEQGSTLGQTETKSNIVPAECIGNYTEIDPKSKFPDSCTMEIGKPS 259
E ++ ++ Q T Q++ + E N + S S + E G S
Sbjct: 258 EICKRIVRASVNDVTSQSETSEQSDQLESACNMEIQSNEQKSSSVSMEDISLSSENGV-S 316
Query: 260 EAILHPNFSSDKKIEHETRSNIVSEVRKPSKAIRQADAGNIAHWTENGFSSLIVAAPEND 439
+ IL N S V+++ K K +A + W ENGFSS+IV APE D
Sbjct: 317 DLILEANHSP------------VNKISKSHKVGEKASQETLKLWKENGFSSMIVVAPELD 364
Query: 440 PWNVIEELLPL 472
PW+V+++LLPL
Sbjct: 365 PWSVVKDLLPL 375
>ref|XP_006435169.1| hypothetical protein CICLE_v10001119mg [Citrus clementina]
gi|557537291|gb|ESR48409.1| hypothetical protein
CICLE_v10001119mg [Citrus clementina]
Length = 401
Score = 55.8 bits (133), Expect = 6e-06
Identities = 39/131 (29%), Positives = 59/131 (45%)
Frame = +2
Query: 80 ETVHNVLHGDIDTPLEQGSTLGQTETKSNIVPAECIGNYTEIDPKSKFPDSCTMEIGKPS 259
E ++ ++ Q T Q++ + E N + S S + E G S
Sbjct: 258 EICKRIVRASVNDVTSQSETSEQSDQLESACNMEIQSNEQKSSSVSMEDISLSSENGV-S 316
Query: 260 EAILHPNFSSDKKIEHETRSNIVSEVRKPSKAIRQADAGNIAHWTENGFSSLIVAAPEND 439
+ IL N S V+++ K K +A + W ENGFSS+IV APE D
Sbjct: 317 DLILEANHSP------------VNKISKSHKVGEKASQETLKLWKENGFSSMIVVAPELD 364
Query: 440 PWNVIEELLPL 472
PW+V+++LLPL
Sbjct: 365 PWSVVKDLLPL 375
>ref|XP_002307715.1| eukaryotic initiation factor 3 gamma subunit family protein
[Populus trichocarpa] gi|222857164|gb|EEE94711.1|
eukaryotic initiation factor 3 gamma subunit family
protein [Populus trichocarpa]
Length = 434
Score = 55.8 bits (133), Expect = 6e-06
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +2
Query: 227 DSCTMEIGKPSEAILHPNFSSDKKIEHETRSNIVSEVRKPSKAIRQADAGN---IAHWTE 397
DSC E+ I K E IVS K KA + + + + W E
Sbjct: 278 DSCNAELNVQISTISIEEMPLPSKHEAADSQTIVSPQSKMGKAPKAGEKASEEALKSWKE 337
Query: 398 NGFSSLIVAAPENDPWNVIEELLPL 472
NGFSSLI+AAP+ D WN+++ LLPL
Sbjct: 338 NGFSSLIIAAPDADAWNLVKVLLPL 362
>gb|ESW32665.1| hypothetical protein PHAVU_001G007200g [Phaseolus vulgaris]
Length = 470
Score = 55.5 bits (132), Expect = 7e-06
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = +2
Query: 332 EVRKPSKAIRQADAGNIAHWTENGFSSLIVAAPENDPWNVIEELLPL 472
EVRK KA +A I W ENGFSSLIVAAPE D W ++++LLPL
Sbjct: 344 EVRKAPKAGERAQKEVIDLWKENGFSSLIVAAPELDTWTLVKDLLPL 390
>ref|XP_002510522.1| translation initiation factor, putative [Ricinus communis]
gi|223551223|gb|EEF52709.1| translation initiation
factor, putative [Ricinus communis]
Length = 514
Score = 55.5 bits (132), Expect = 7e-06
Identities = 31/93 (33%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Frame = +2
Query: 209 PKSKFPDSCTMEIGKPSEAILHPNF--SSDKKI---EHETRSNIVSEVRKPSKAIRQADA 373
P S D ++E + +I SS+ ++ +H+ ++ +S++ K KA +A
Sbjct: 278 PMSSHEDGPSVEANDQNSSISMEEIPESSENQVADLDHDATASPISKMSKAPKAGERASE 337
Query: 374 GNIAHWTENGFSSLIVAAPENDPWNVIEELLPL 472
+ W ENGFSSLI+AAP+ D W++++ LLPL
Sbjct: 338 EALKLWKENGFSSLIIAAPDLDAWSLVKVLLPL 370
>gb|EOY15014.1| Eukaryotic initiation factor 3 gamma subunit family protein
[Theobroma cacao]
Length = 417
Score = 55.1 bits (131), Expect = 1e-05
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = +2
Query: 278 NFSSDKKIEHETRSNIVSEVRKPSKAIRQADAGN---IAHWTENGFSSLIVAAPENDPWN 448
+ SS+ + N +S V K KA + D I W ENGFSSLI+AAPE D W+
Sbjct: 276 HLSSENNVADLVPENELSTVSKTCKAPKAGDKAPKEAIQLWKENGFSSLIIAAPEQDAWS 335
Query: 449 VIEELLPL 472
++++LLPL
Sbjct: 336 LVKDLLPL 343
>gb|EOY15012.1| Eukaryotic initiation factor 3 gamma subunit family protein
[Theobroma cacao]
Length = 451
Score = 55.1 bits (131), Expect = 1e-05
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = +2
Query: 278 NFSSDKKIEHETRSNIVSEVRKPSKAIRQADAGN---IAHWTENGFSSLIVAAPENDPWN 448
+ SS+ + N +S V K KA + D I W ENGFSSLI+AAPE D W+
Sbjct: 310 HLSSENNVADLVPENELSTVSKTCKAPKAGDKAPKEAIQLWKENGFSSLIIAAPEQDAWS 369
Query: 449 VIEELLPL 472
++++LLPL
Sbjct: 370 LVKDLLPL 377
>ref|XP_002882030.1| eukaryotic initiation factor 3 gamma subunit family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297327869|gb|EFH58289.1| eukaryotic initiation factor
3 gamma subunit family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 446
Score = 55.1 bits (131), Expect = 1e-05
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Frame = +2
Query: 293 KKIEHETRSNIVSEVRKPSKAIRQADAG------NIAHWTENGFSSLIVAAPENDPWNVI 454
++I T + +V V SK I+ A AG I W ENGFSSLI+AA + DPW+V
Sbjct: 309 EEISATTEAGVVDIVVPESKVIKAAKAGAKASKETIEMWRENGFSSLIIAAQDQDPWSVA 368
Query: 455 EELLPL 472
+++LPL
Sbjct: 369 KDVLPL 374