BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00023889
         (620 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004498237.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   148   1e-33
ref|XP_004498236.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   148   1e-33
gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]       140   2e-31
emb|CBI26821.3| unnamed protein product [Vitis vinifera]              140   3e-31
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   140   3e-31
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   138   1e-30
ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   137   3e-30
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   135   9e-30
gb|EOY01384.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobro...   134   2e-29
gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum de...   134   2e-29
gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum de...   133   5e-29
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   132   6e-29
ref|XP_006495371.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   132   8e-29
gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tu...   132   8e-29
ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   132   1e-28
ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutr...   132   1e-28
gb|ABI34311.1| RNA dependent RNA polymerase family protein [Sola...   132   1e-28
gb|EOY01387.1| Rna-dependent RNA polymerase, putative [Theobroma...   131   1e-28
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper...   131   1e-28
ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   131   2e-28

>ref|XP_004498237.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Cicer
           arietinum]
          Length = 1100

 Score =  148 bits (373), Expect = 1e-33
 Identities = 76/184 (41%), Positives = 114/184 (61%)
 Frame = -3

Query: 558 LEEKFVHYRKSEQDIALEFCKQFTPNTKNLAILNPPEGCDVPFSVIFKLNALLQCGTISW 379
           + E FVHY+++E    LE    F+ N   + I+ PP+G  +PF ++FK+N+L+Q G +S 
Sbjct: 245 IREYFVHYQENEGQYTLESGSPFSHNLDVVPIVAPPQGIYIPFDILFKVNSLVQHGCLSG 304

Query: 378 PTLDNKFFDFLHSQRNSVAKFKKAFTKLECNAENIVHKPFDWLGEKLKAVENSNENCDTD 199
             LDN F+  +   R +V   + A  K+  + ++  ++P  WL ++ +   NSN    + 
Sbjct: 305 SELDNAFYCLVDPLRINVDFIEHALEKMYYS-KDFCYEPARWLKDQYRMYLNSNYPLQSP 363

Query: 198 DKPLAKGLFYINKVDVTPSRIYFCRPEIQVSNRVLRHFAEHIENFLRVSFVDENRASLHS 19
              L  GL Y+ +V +TP ++YFC PEI VSNRV+RHF EHI+NFLRVSFVDE    L+S
Sbjct: 364 SISLDNGLVYVRRVQITPCKVYFCGPEINVSNRVVRHFHEHIDNFLRVSFVDEELDKLYS 423

Query: 18  SDLS 7
           +DLS
Sbjct: 424 TDLS 427


>ref|XP_004498236.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Cicer
           arietinum]
          Length = 1126

 Score =  148 bits (373), Expect = 1e-33
 Identities = 76/184 (41%), Positives = 114/184 (61%)
 Frame = -3

Query: 558 LEEKFVHYRKSEQDIALEFCKQFTPNTKNLAILNPPEGCDVPFSVIFKLNALLQCGTISW 379
           + E FVHY+++E    LE    F+ N   + I+ PP+G  +PF ++FK+N+L+Q G +S 
Sbjct: 245 IREYFVHYQENEGQYTLESGSPFSHNLDVVPIVAPPQGIYIPFDILFKVNSLVQHGCLSG 304

Query: 378 PTLDNKFFDFLHSQRNSVAKFKKAFTKLECNAENIVHKPFDWLGEKLKAVENSNENCDTD 199
             LDN F+  +   R +V   + A  K+  + ++  ++P  WL ++ +   NSN    + 
Sbjct: 305 SELDNAFYCLVDPLRINVDFIEHALEKMYYS-KDFCYEPARWLKDQYRMYLNSNYPLQSP 363

Query: 198 DKPLAKGLFYINKVDVTPSRIYFCRPEIQVSNRVLRHFAEHIENFLRVSFVDENRASLHS 19
              L  GL Y+ +V +TP ++YFC PEI VSNRV+RHF EHI+NFLRVSFVDE    L+S
Sbjct: 364 SISLDNGLVYVRRVQITPCKVYFCGPEINVSNRVVRHFHEHIDNFLRVSFVDEELDKLYS 423

Query: 18  SDLS 7
           +DLS
Sbjct: 424 TDLS 427


>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
          Length = 1133

 Score =  140 bits (354), Expect = 2e-31
 Identities = 83/204 (40%), Positives = 115/204 (56%), Gaps = 1/204 (0%)
 Frame = -3

Query: 615 IAKSSFFGWEISKLVNTTFLEEKFVHYRKSEQDIALEFCKQFTPNTKNLAILNPPEGCDV 436
           I  SS    E+   V+   L E FV+Y++SE+   LE    F+ N   + I+ PP G ++
Sbjct: 219 IGHSSALYLELPYGVDLPDLRENFVYYKESEERFILESGSSFSRNLDLVPIVGPPSGINL 278

Query: 435 PFSVIFKLNALLQCGTISWPTLDNKFFDFLHSQR-NSVAKFKKAFTKLECNAENIVHKPF 259
           PF  +FK+N LLQ G +S PTLD  F+  +  QR  +V     A  KL  N +   ++P 
Sbjct: 279 PFETVFKINMLLQNGCLSGPTLDVDFYRLVDPQRIRNVDCINYALEKL-FNLKECPYEPA 337

Query: 258 DWLGEKLKAVENSNENCDTDDKPLAKGLFYINKVDVTPSRIYFCRPEIQVSNRVLRHFAE 79
            WL E+ +    +          L  GL Y+ +V VTPS++YFC PEI VSNRVLR + +
Sbjct: 338 AWLNEQYRKYLTAPRPPKPPAIALDSGLVYVRRVQVTPSKVYFCGPEINVSNRVLREYID 397

Query: 78  HIENFLRVSFVDENRASLHSSDLS 7
           +I+ FLRVSFVDE    L S+DLS
Sbjct: 398 YIDYFLRVSFVDEELEKLFSTDLS 421


>emb|CBI26821.3| unnamed protein product [Vitis vinifera]
          Length = 943

 Score =  140 bits (353), Expect = 3e-31
 Identities = 71/182 (39%), Positives = 112/182 (61%)
 Frame = -3

Query: 552 EKFVHYRKSEQDIALEFCKQFTPNTKNLAILNPPEGCDVPFSVIFKLNALLQCGTISWPT 373
           E F  Y+++++   LE    F+ N   + I+ PP+G ++PF ++FK+N L+Q G +S PT
Sbjct: 197 ENFARYKENDRKFILESGASFSGNLHLVPIVGPPQGSNLPFKILFKINTLVQNGCLSGPT 256

Query: 372 LDNKFFDFLHSQRNSVAKFKKAFTKLECNAENIVHKPFDWLGEKLKAVENSNENCDTDDK 193
           LD  FF ++  QR +++  + A  KL    E   ++P  WL E+ +    S +   +   
Sbjct: 257 LDTNFFRWVDPQRINISFIEHALEKLYY-LEECCYEPVRWLHEQYRTYI-SKQVAGSPAI 314

Query: 192 PLAKGLFYINKVDVTPSRIYFCRPEIQVSNRVLRHFAEHIENFLRVSFVDENRASLHSSD 13
            L  GL Y+ +V +TP ++YFC PE+ VSNRVLR++ E I+NFLRVSF+DEN   +HS+ 
Sbjct: 315 SLDTGLVYVRRVQITPCKVYFCGPEVNVSNRVLRNYPEDIDNFLRVSFLDENSEKIHSTV 374

Query: 12  LS 7
           +S
Sbjct: 375 IS 376


>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
          Length = 1109

 Score =  140 bits (353), Expect = 3e-31
 Identities = 71/182 (39%), Positives = 112/182 (61%)
 Frame = -3

Query: 552 EKFVHYRKSEQDIALEFCKQFTPNTKNLAILNPPEGCDVPFSVIFKLNALLQCGTISWPT 373
           E F  Y+++++   LE    F+ N   + I+ PP+G ++PF ++FK+N L+Q G +S PT
Sbjct: 230 ENFARYKENDRKFILESGASFSGNLHLVPIVGPPQGSNLPFKILFKINTLVQNGCLSGPT 289

Query: 372 LDNKFFDFLHSQRNSVAKFKKAFTKLECNAENIVHKPFDWLGEKLKAVENSNENCDTDDK 193
           LD  FF ++  QR +++  + A  KL    E   ++P  WL E+ +    S +   +   
Sbjct: 290 LDTNFFRWVDPQRINISFIEHALEKLYY-LEECCYEPVRWLHEQYRTYI-SKQVAGSPAI 347

Query: 192 PLAKGLFYINKVDVTPSRIYFCRPEIQVSNRVLRHFAEHIENFLRVSFVDENRASLHSSD 13
            L  GL Y+ +V +TP ++YFC PE+ VSNRVLR++ E I+NFLRVSF+DEN   +HS+ 
Sbjct: 348 SLDTGLVYVRRVQITPCKVYFCGPEVNVSNRVLRNYPEDIDNFLRVSFLDENSEKIHSTV 407

Query: 12  LS 7
           +S
Sbjct: 408 IS 409


>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score =  138 bits (348), Expect = 1e-30
 Identities = 73/205 (35%), Positives = 119/205 (58%), Gaps = 2/205 (0%)
 Frame = -3

Query: 615 IAKSSFFGWEISKLVNTTFLEEKFVHYRKSEQDIALEFCKQFTPNTKNLAILNPPEGCDV 436
           I +S+    E+   +     +E F +Y++SE    LE    ++ +   + I+ PP+G  +
Sbjct: 221 IGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPDGIAL 280

Query: 435 PFSVIFKLNALLQCGTISWPTLDNKFFDFLHSQRN--SVAKFKKAFTKLECNAENIVHKP 262
           P+ ++FK+N L+Q G ++ P LD+ F+  +   R   S++  + A  KL  + +   ++P
Sbjct: 281 PYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSISCIEHALDKLY-HLKECCYEP 339

Query: 261 FDWLGEKLKAVENSNENCDTDDKPLAKGLFYINKVDVTPSRIYFCRPEIQVSNRVLRHFA 82
             WL ++ +    S     +    L  GL Y+++V VTPSR+YFC PEI VSNRVLRHF 
Sbjct: 340 SRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFR 399

Query: 81  EHIENFLRVSFVDENRASLHSSDLS 7
             I+NFLR+SF+DE+   +HS+DLS
Sbjct: 400 RDIDNFLRISFIDEDLDKIHSTDLS 424


>ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Fragaria vesca
           subsp. vesca]
          Length = 1119

 Score =  137 bits (344), Expect = 3e-30
 Identities = 72/183 (39%), Positives = 108/183 (59%)
 Frame = -3

Query: 555 EEKFVHYRKSEQDIALEFCKQFTPNTKNLAILNPPEGCDVPFSVIFKLNALLQCGTISWP 376
           EE F +Y+K++    LE    F+ N   + I+  P G D+P+ ++FK+N L+Q G +S P
Sbjct: 234 EENFAYYKKTDGQFILENGSTFSRNRDLVPIVGSPAGIDLPYDILFKINLLVQQGCLSGP 293

Query: 375 TLDNKFFDFLHSQRNSVAKFKKAFTKLECNAENIVHKPFDWLGEKLKAVENSNENCDTDD 196
           TLDN F+  +  +R S    + A  KL  N +   ++P  WL E+ +    S +      
Sbjct: 294 TLDNNFYRLVDPRRISRPCIEFALDKLS-NLKESCYEPAVWLNEEYRKYMMSKKPPKPAL 352

Query: 195 KPLAKGLFYINKVDVTPSRIYFCRPEIQVSNRVLRHFAEHIENFLRVSFVDENRASLHSS 16
             L  GL Y+ +V +TPS++YF  PE+ VSNR+LR ++  I+NFLRVSFVDE    L+S+
Sbjct: 353 ISLDSGLVYVRRVQITPSKVYFSGPEVNVSNRILRQYSSDIDNFLRVSFVDEEMEKLYST 412

Query: 15  DLS 7
           DLS
Sbjct: 413 DLS 415


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  135 bits (340), Expect = 9e-30
 Identities = 68/182 (37%), Positives = 108/182 (59%)
 Frame = -3

Query: 552 EKFVHYRKSEQDIALEFCKQFTPNTKNLAILNPPEGCDVPFSVIFKLNALLQCGTISWPT 373
           E F +Y++++    LE    ++ N   + IL PP+G  +PF ++FK+N L+Q G +S PT
Sbjct: 232 ENFAYYKENDGKFILESGSSYSHNLHLVPILGPPQGSSLPFQILFKINTLVQNGCLSGPT 291

Query: 372 LDNKFFDFLHSQRNSVAKFKKAFTKLECNAENIVHKPFDWLGEKLKAVENSNENCDTDDK 193
           LD  FF  +  +R  ++  + A  KL  + +   ++P  WL E+ +          +   
Sbjct: 292 LDTSFFRLVDPERFPISFIEHALEKLY-HLKECCYEPVRWLSEQYRTYVKKPV-AGSPAI 349

Query: 192 PLAKGLFYINKVDVTPSRIYFCRPEIQVSNRVLRHFAEHIENFLRVSFVDENRASLHSSD 13
            L  GL Y+ +V +TP ++YFC PE+ VSNRVLR++ E I+NFLRVSF+DEN   +HS+ 
Sbjct: 350 SLDTGLVYVRRVQITPCKVYFCGPEVNVSNRVLRNYPEDIDNFLRVSFLDENLEKIHSTV 409

Query: 12  LS 7
           +S
Sbjct: 410 IS 411


>gb|EOY01384.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
           gi|508709488|gb|EOY01385.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
           gi|508709489|gb|EOY01386.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score =  134 bits (338), Expect = 2e-29
 Identities = 76/202 (37%), Positives = 109/202 (53%)
 Frame = -3

Query: 615 IAKSSFFGWEISKLVNTTFLEEKFVHYRKSEQDIALEFCKQFTPNTKNLAILNPPEGCDV 436
           I +SS    E+   +      E F +Y++SE    LE    ++ N   + I+ P  G D+
Sbjct: 218 IGQSSVLCLELPYYLQLPNFRENFAYYKESEGKFVLESGSSYSRNLNLVPIVGPSLGIDL 277

Query: 435 PFSVIFKLNALLQCGTISWPTLDNKFFDFLHSQRNSVAKFKKAFTKLECNAENIVHKPFD 256
           P+ ++FK+N L+Q G I  P LD  F+  ++  R        A  KL    E    +P  
Sbjct: 278 PYEILFKINLLVQNGCIPGPALDANFYRLVNPCRIDKVYIDHALEKLYYLKE-CCFEPSK 336

Query: 255 WLGEKLKAVENSNENCDTDDKPLAKGLFYINKVDVTPSRIYFCRPEIQVSNRVLRHFAEH 76
           WL E+ K    S +N  +    L  GL  + +V +TPSR+YFC PEI VSNRVLRHF + 
Sbjct: 337 WLLEQYKGYIASKKNPGSPVISLDDGLVNVRRVQITPSRVYFCGPEINVSNRVLRHFHDD 396

Query: 75  IENFLRVSFVDENRASLHSSDL 10
           I+NFLR++FVDE    +HS+DL
Sbjct: 397 IDNFLRITFVDEELEKIHSTDL 418


>gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1139

 Score =  134 bits (337), Expect = 2e-29
 Identities = 78/204 (38%), Positives = 115/204 (56%), Gaps = 2/204 (0%)
 Frame = -3

Query: 615 IAKSSFFGWEISKLVNTTFLEEKFVHYRKSEQDIALEFCKQFTPNTKNLAILN--PPEGC 442
           I  SS    +  + V+    +E F HY + E +I L+    F  + K+  + N  PPEG 
Sbjct: 199 IGLSSSLCLQFRRGVHLPNFQESFFHYTERENNITLQTGFTFFVSQKSALVPNVQPPEGI 258

Query: 441 DVPFSVIFKLNALLQCGTISWPTLDNKFFDFLHSQRNSVAKFKKAFTKLECNAENIVHKP 262
            +P+ ++FK+++L+Q G I  P LD  FF  +  QR +VA  ++A  KL    E   + P
Sbjct: 259 AIPYKILFKISSLVQHGCIPGPALDVYFFRLVDPQRRNVACIEQALEKLYYLKE-CCYDP 317

Query: 261 FDWLGEKLKAVENSNENCDTDDKPLAKGLFYINKVDVTPSRIYFCRPEIQVSNRVLRHFA 82
             WL E+        +   +    L  GL Y+ +V VTP ++YFC PE+ VSNRVLR+++
Sbjct: 318 VRWLTEQYDGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYS 377

Query: 81  EHIENFLRVSFVDENRASLHSSDL 10
           E I+NFLRVSFVDE    L+S+DL
Sbjct: 378 EDIDNFLRVSFVDEEWEKLYSTDL 401


>gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1180

 Score =  133 bits (334), Expect = 5e-29
 Identities = 78/204 (38%), Positives = 115/204 (56%), Gaps = 2/204 (0%)
 Frame = -3

Query: 615 IAKSSFFGWEISKLVNTTFLEEKFVHYRKSEQDIALEFCKQFTPNTKNLAILN--PPEGC 442
           I  SS    +  + V+    +E F HY + E +I L+    F  + K+  + N  PPEG 
Sbjct: 173 IGLSSSLCLQFRRGVHLPNFQEIFFHYTERENNITLQTGFTFFVSQKSALVPNVQPPEGI 232

Query: 441 DVPFSVIFKLNALLQCGTISWPTLDNKFFDFLHSQRNSVAKFKKAFTKLECNAENIVHKP 262
            +P+ ++FK+++L+Q G I  P LD  FF  +  QR +VA  ++A  KL    E   + P
Sbjct: 233 AIPYKILFKISSLVQHGCIPGPALDVYFFRLVDPQRRNVACIEQALEKLYYLKE-CCYDP 291

Query: 261 FDWLGEKLKAVENSNENCDTDDKPLAKGLFYINKVDVTPSRIYFCRPEIQVSNRVLRHFA 82
             WL E+        +   +    L  GL Y+ +V VTP ++YFC PE+ VSNRVLR+++
Sbjct: 292 VRWLTEQYDGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYS 351

Query: 81  EHIENFLRVSFVDENRASLHSSDL 10
           E I+NFLRVSFVDE    L+S+DL
Sbjct: 352 EDIDNFLRVSFVDEEWEKLYSTDL 375


>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
          Length = 1115

 Score =  132 bits (333), Expect = 6e-29
 Identities = 77/204 (37%), Positives = 115/204 (56%), Gaps = 2/204 (0%)
 Frame = -3

Query: 615 IAKSSFFGWEISKLVNTTFLEEKFVHYRKSEQDIALEFCKQFTPNTKNLAILN--PPEGC 442
           I  SS    +  + V+    +E F HY + E +I L+    F  + K+  + N  PPEG 
Sbjct: 207 IGLSSSLCLQFRRGVHLPNFQESFFHYAERENNITLQTGFTFFVSQKSALVPNVQPPEGI 266

Query: 441 DVPFSVIFKLNALLQCGTISWPTLDNKFFDFLHSQRNSVAKFKKAFTKLECNAENIVHKP 262
            +P+ ++FK+++L+Q G I  P L+  FF  +  QR +VA  ++A  KL    E   + P
Sbjct: 267 AIPYKILFKISSLVQHGCIPGPALNVNFFRLVDPQRRNVACIEQALEKLYYLKE-CCYDP 325

Query: 261 FDWLGEKLKAVENSNENCDTDDKPLAKGLFYINKVDVTPSRIYFCRPEIQVSNRVLRHFA 82
             WL E+        +   +    L  GL Y+ +V VTP ++YFC PE+ VSNRVLR+++
Sbjct: 326 VRWLTEQYDGYLKGRQPPKSPSINLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYS 385

Query: 81  EHIENFLRVSFVDENRASLHSSDL 10
           E I+NFLRVSFVDE    L+S+DL
Sbjct: 386 EDIDNFLRVSFVDEEWEKLYSTDL 409


>ref|XP_006495371.1| PREDICTED: RNA-dependent RNA polymerase 1-like, partial [Citrus
           sinensis]
          Length = 633

 Score =  132 bits (332), Expect = 8e-29
 Identities = 75/204 (36%), Positives = 115/204 (56%)
 Frame = -3

Query: 618 SIAKSSFFGWEISKLVNTTFLEEKFVHYRKSEQDIALEFCKQFTPNTKNLAILNPPEGCD 439
           SI +SS    E+ +  +     + F +Y++S     L     F+ NT  + +++PP G  
Sbjct: 50  SIGQSSAMCLELPRGAHIPKALKDFFYYKESPLQFTLVRGSGFSSNTDLVPMISPPHGIK 109

Query: 438 VPFSVIFKLNALLQCGTISWPTLDNKFFDFLHSQRNSVAKFKKAFTKLECNAENIVHKPF 259
           +PF ++FK+N+L+Q G I  P LD KFF  +   R  +   + A   L  +     ++P 
Sbjct: 110 LPFKILFKINSLVQHGCIPGPALDAKFFCLVDPSRIKMECIEHALETL-FHLRECCYEPV 168

Query: 258 DWLGEKLKAVENSNENCDTDDKPLAKGLFYINKVDVTPSRIYFCRPEIQVSNRVLRHFAE 79
            WL E+ +    S    ++    L  GL Y+NKV VTPS++YFC PEI +SNRVLR + +
Sbjct: 169 SWLAEQYRKYVLSGRLLNSPAVALDDGLVYVNKVLVTPSKVYFCGPEISLSNRVLRSYPD 228

Query: 78  HIENFLRVSFVDENRASLHSSDLS 7
            I+NFLR+SFVDE+   L+S+ LS
Sbjct: 229 EIDNFLRLSFVDEDLDKLYSTVLS 252


>gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 841

 Score =  132 bits (332), Expect = 8e-29
 Identities = 77/204 (37%), Positives = 115/204 (56%), Gaps = 2/204 (0%)
 Frame = -3

Query: 615 IAKSSFFGWEISKLVNTTFLEEKFVHYRKSEQDIALEFCKQFTPNTKNLAILN--PPEGC 442
           I  SS    +  + V+    +E F HY + E +I L+    F  + K+  + N  PPEG 
Sbjct: 207 IGLSSSLCLQFRRGVHLPNFQESFFHYTERENNITLQTGFTFFVSQKSALVPNVQPPEGI 266

Query: 441 DVPFSVIFKLNALLQCGTISWPTLDNKFFDFLHSQRNSVAKFKKAFTKLECNAENIVHKP 262
            +P+ ++FK+++L+Q G I  P L+  FF  +  QR +VA  ++A  KL    E   + P
Sbjct: 267 AIPYKILFKISSLVQHGCIPGPALNVYFFRLVDPQRRNVACIEQALEKLYYLKE-CCYDP 325

Query: 261 FDWLGEKLKAVENSNENCDTDDKPLAKGLFYINKVDVTPSRIYFCRPEIQVSNRVLRHFA 82
             WL E+        +   +    L  GL Y+ +V VTP ++YFC PE+ VSNRVLR+++
Sbjct: 326 VRWLTEQYDGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYS 385

Query: 81  EHIENFLRVSFVDENRASLHSSDL 10
           E I+NFLRVSFVDE    L+S+DL
Sbjct: 386 EDIDNFLRVSFVDEEWEKLYSTDL 409


>ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Solanum
           tuberosum] gi|565401229|ref|XP_006366110.1| PREDICTED:
           RNA-dependent RNA polymerase 1-like isoform X2 [Solanum
           tuberosum]
          Length = 1115

 Score =  132 bits (331), Expect = 1e-28
 Identities = 77/204 (37%), Positives = 115/204 (56%), Gaps = 2/204 (0%)
 Frame = -3

Query: 615 IAKSSFFGWEISKLVNTTFLEEKFVHYRKSEQDIALEFCKQFTPNTKNLAILN--PPEGC 442
           I  SS    +  + V+    +E F HY + E +I L+    F  + K+  + N  PPEG 
Sbjct: 207 IGLSSSLCLQFRRGVHLPNFQESFFHYAERENNITLQTGFTFFVSQKSALVPNVQPPEGI 266

Query: 441 DVPFSVIFKLNALLQCGTISWPTLDNKFFDFLHSQRNSVAKFKKAFTKLECNAENIVHKP 262
            +P+ ++FK+++L+Q G I  P L+  FF  +  QR +VA  ++A  KL    E   + P
Sbjct: 267 AIPYKILFKISSLVQHGCIPGPALNVYFFRLVDPQRRNVACIEQALEKLYYLKE-CCYDP 325

Query: 261 FDWLGEKLKAVENSNENCDTDDKPLAKGLFYINKVDVTPSRIYFCRPEIQVSNRVLRHFA 82
             WL E+        +   +    L  GL Y+ +V VTP ++YFC PE+ VSNRVLR+++
Sbjct: 326 VRWLTEQYDGYLKGRQPPKSPSINLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYS 385

Query: 81  EHIENFLRVSFVDENRASLHSSDL 10
           E I+NFLRVSFVDE    L+S+DL
Sbjct: 386 EDIDNFLRVSFVDEEWEKLYSTDL 409


>ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutrema salsugineum]
           gi|557094740|gb|ESQ35322.1| hypothetical protein
           EUTSA_v10006629mg [Eutrema salsugineum]
          Length = 1108

 Score =  132 bits (331), Expect = 1e-28
 Identities = 78/205 (38%), Positives = 115/205 (56%), Gaps = 2/205 (0%)
 Frame = -3

Query: 615 IAKSSFFGWEISKLVNTTFLEEKFVHYRKSEQDIAL-EFCKQFTPNTKNLA-ILNPPEGC 442
           I +SS F  E+ + +N     E F +Y + E    L E    ++ +  NL  +++PP G 
Sbjct: 217 IGQSSSFCLELPRQLNVPDFRENFANYAEHEAGTFLIESGSSYSSDATNLVPVVDPPPGF 276

Query: 441 DVPFSVIFKLNALLQCGTISWPTLDNKFFDFLHSQRNSVAKFKKAFTKLECNAENIVHKP 262
           D+PF ++FK+NAL+Q   I  P LD  F+  L  Q++  A    +  KL    E   ++P
Sbjct: 277 DLPFEILFKVNALVQSACIPGPVLDLDFYQLLDPQKHERALIDHSLEKLFYLKE-CCYEP 335

Query: 261 FDWLGEKLKAVENSNENCDTDDKPLAKGLFYINKVDVTPSRIYFCRPEIQVSNRVLRHFA 82
             WL E  K      +  ++    L  GL Y+++V VTP+RIYF  PE+ VSNRVLRH++
Sbjct: 336 ARWLREGYKEWTTKEKLPESPMISLDDGLVYMHRVQVTPTRIYFQGPEVNVSNRVLRHYS 395

Query: 81  EHIENFLRVSFVDENRASLHSSDLS 7
            +I NFLR+SFVDE+   + S DLS
Sbjct: 396 NYINNFLRISFVDEDLEKIRSMDLS 420


>gb|ABI34311.1| RNA dependent RNA polymerase family protein [Solanum demissum]
          Length = 963

 Score =  132 bits (331), Expect = 1e-28
 Identities = 77/204 (37%), Positives = 116/204 (56%), Gaps = 2/204 (0%)
 Frame = -3

Query: 615 IAKSSFFGWEISKLVNTTFLEEKFVHYRKSEQDIALEFCKQFTPNTKNLAILN--PPEGC 442
           I  SS    +  + V+    +EKF HY + E +I L+    F  + K+  + N  PPEG 
Sbjct: 55  IGLSSSLCLQFRRGVHLPNFQEKFFHYAERENNITLQTGFTFFISQKSSLVPNVQPPEGI 114

Query: 441 DVPFSVIFKLNALLQCGTISWPTLDNKFFDFLHSQRNSVAKFKKAFTKLECNAENIVHKP 262
            +P+ ++FK+++L+Q G I  P L+  FF  +  QR +VA  ++A  KL    E   + P
Sbjct: 115 AIPYKILFKISSLVQHGCIPGPALNVYFFRLVDPQRRNVACIEQALEKLYYLKE-CCYDP 173

Query: 261 FDWLGEKLKAVENSNENCDTDDKPLAKGLFYINKVDVTPSRIYFCRPEIQVSNRVLRHFA 82
             WL E+        +   +    L  GL Y+ +V VTP ++YFC PE+ VSNRVLR+++
Sbjct: 174 VRWLTEQYDGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYS 233

Query: 81  EHIENFLRVSFVDENRASLHSSDL 10
           E I+NFLRVSFVDE    L+S++L
Sbjct: 234 EDIDNFLRVSFVDEEWEKLYSTEL 257


>gb|EOY01387.1| Rna-dependent RNA polymerase, putative [Theobroma cacao]
          Length = 1125

 Score =  131 bits (330), Expect = 1e-28
 Identities = 72/194 (37%), Positives = 111/194 (57%)
 Frame = -3

Query: 588 EISKLVNTTFLEEKFVHYRKSEQDIALEFCKQFTPNTKNLAILNPPEGCDVPFSVIFKLN 409
           E+ + V     +E F +YRK E +  LE    F+ N   + ++ PPEG D+P+ V+FK+N
Sbjct: 225 ELPRGVKLPKFDESF-YYRKVEDNFILENGSSFSCNPDLVPMITPPEGFDLPYGVLFKVN 283

Query: 408 ALLQCGTISWPTLDNKFFDFLHSQRNSVAKFKKAFTKLECNAENIVHKPFDWLGEKLKAV 229
           +L+Q G +  PTLD  F+  +  +R  +A  ++A  K     E   ++P  WL E+ +  
Sbjct: 284 SLVQHGCLLPPTLDADFYQLVDPRRIDIAFIERALEKAYSFKE-YCYEPAKWLAEQYEKY 342

Query: 228 ENSNENCDTDDKPLAKGLFYINKVDVTPSRIYFCRPEIQVSNRVLRHFAEHIENFLRVSF 49
                       P   G+  + +V VTPS++YF  PE+ +SNRVLR++ + I+NFLRVSF
Sbjct: 343 RKLERPLRPPILPSNDGIVAVRRVQVTPSKVYFSGPELNLSNRVLRNYIKDIDNFLRVSF 402

Query: 48  VDENRASLHSSDLS 7
           VDE    +HS+DLS
Sbjct: 403 VDEELGKMHSTDLS 416


>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
           gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
           [Solanum lycopersicum]
          Length = 1114

 Score =  131 bits (330), Expect = 1e-28
 Identities = 77/204 (37%), Positives = 113/204 (55%), Gaps = 2/204 (0%)
 Frame = -3

Query: 615 IAKSSFFGWEISKLVNTTFLEEKFVHYRKSEQDIALEFCKQFTPNTKNLAILN--PPEGC 442
           I  SS    +  + V     EE F HY + E +I L+    F  + K+  + N  PPEG 
Sbjct: 207 IGLSSSLCLQFRRGVRLPNFEESFFHYAERENNITLQTGFTFFVSQKSALVPNVQPPEGI 266

Query: 441 DVPFSVIFKLNALLQCGTISWPTLDNKFFDFLHSQRNSVAKFKKAFTKLECNAENIVHKP 262
            +P+ ++FK+++L+Q G I  P L+  FF  +  +R +VA  + A  KL    E   + P
Sbjct: 267 SIPYKILFKISSLVQHGCIPGPALNVYFFRLVDPRRRNVACIEHALEKLYYIKE-CCYDP 325

Query: 261 FDWLGEKLKAVENSNENCDTDDKPLAKGLFYINKVDVTPSRIYFCRPEIQVSNRVLRHFA 82
             WL E+        +   +    L  GL Y+ +V VTP ++YFC PE+ VSNRVLR+++
Sbjct: 326 VRWLTEQYDGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYS 385

Query: 81  EHIENFLRVSFVDENRASLHSSDL 10
           E I+NFLRVSFVDE    L+S+DL
Sbjct: 386 EDIDNFLRVSFVDEEWEKLYSTDL 409


>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Glycine
           max] gi|571439308|ref|XP_006574822.1| PREDICTED:
           RNA-dependent RNA polymerase 1-like isoform X2 [Glycine
           max] gi|571439310|ref|XP_006574823.1| PREDICTED:
           RNA-dependent RNA polymerase 1-like isoform X3 [Glycine
           max]
          Length = 1125

 Score =  131 bits (329), Expect = 2e-28
 Identities = 69/182 (37%), Positives = 105/182 (57%)
 Frame = -3

Query: 552 EKFVHYRKSEQDIALEFCKQFTPNTKNLAILNPPEGCDVPFSVIFKLNALLQCGTISWPT 373
           E F +Y +SE+   L+    F+ N   + I+ PP G  + + ++FK+N+L+Q   ++ P 
Sbjct: 243 ENFAYYEESERQYTLQTGVPFSQNWGLVPIVAPPLGVKISYDILFKVNSLVQHACLAGPA 302

Query: 372 LDNKFFDFLHSQRNSVAKFKKAFTKLECNAENIVHKPFDWLGEKLKAVENSNENCDTDDK 193
           LD  F+  +  +R      + A  K+  + E   ++P  WL ++ K    S  +  +   
Sbjct: 303 LDGDFYRLVDPRRMPREFIEYALEKIYYSKE-FCYEPTKWLTDQYKTYLESKNHPRSPAI 361

Query: 192 PLAKGLFYINKVDVTPSRIYFCRPEIQVSNRVLRHFAEHIENFLRVSFVDENRASLHSSD 13
            L  GL Y+ +V +TP ++YFC PE+ VSNRVLRHF EHI+NFLRVSFVDE    L S+D
Sbjct: 362 SLDTGLVYVRRVQITPCKVYFCGPEMNVSNRVLRHFREHIDNFLRVSFVDEELDKLFSTD 421

Query: 12  LS 7
           LS
Sbjct: 422 LS 423