BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00023885
         (359 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285818.1| PREDICTED: uncharacterized protein LOC100260...    60   4e-07
ref|NP_192594.2| DNA-directed RNA polymerase II protein [Arabido...    59   9e-07
gb|AAL59980.1| unknown protein [Arabidopsis thaliana]                  59   9e-07

>ref|XP_002285818.1| PREDICTED: uncharacterized protein LOC100260778 [Vitis vinifera]
           gi|302141899|emb|CBI19102.3| unnamed protein product
           [Vitis vinifera]
          Length = 478

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
 Frame = +1

Query: 1   KAKANEQKYWRHIEEEKVSQXXXXXXXXXXXXIHGEAKLLAKTNGINARKDMLDGLFDLL 180
           K KA++Q  WR ++ EK+++            + G+AK+   +N +  +  +L+    +L
Sbjct: 56  KGKADDQINWRVLQNEKLARLREKLRHRKEQYLDGKAKVEKMSNDLKLKYGLLESAMSML 115

Query: 181 QEKRME-LHKFYSDLICXXXXXXXXXXXXXXXMQSVVIRHLLRAYPLQRISFGKGKRD 351
           ++ R+E L KFY +LIC                QSVVI+ + + +P +R++    K+D
Sbjct: 116 EKNRVEQLEKFYPNLICTQNLGLMAITSERFHKQSVVIKQICKLFPQRRVNIDGEKKD 173


>ref|NP_192594.2| DNA-directed RNA polymerase II protein [Arabidopsis thaliana]
           gi|23297675|gb|AAN13006.1| unknown protein [Arabidopsis
           thaliana] gi|332657255|gb|AEE82655.1| DNA-directed RNA
           polymerase II protein [Arabidopsis thaliana]
          Length = 473

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
 Frame = +1

Query: 1   KAKANEQKYWRHIEEEKVSQXXXXXXXXXXXXIHGEAKLLAKTNGINARKDMLDGLFDLL 180
           K KA++QK WR I+ EK+S+              G+ K+   ++ +  +  +LD     L
Sbjct: 56  KGKADDQKNWRLIQNEKISKLKKKLKSNKELVTQGKVKIERGSSDLKVKYGVLDSARSTL 115

Query: 181 QEKRME-LHKFYSDLICXXXXXXXXXXXXXXXMQSVVIRHLLRAYPLQRISF 333
           ++ R+E + K++ +LIC                QSVV++ + + +PL+R+SF
Sbjct: 116 EKTRVEQVEKYFPNLICTQSLGHMAISSERLHKQSVVVKQICKLFPLRRVSF 167


>gb|AAL59980.1| unknown protein [Arabidopsis thaliana]
          Length = 473

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
 Frame = +1

Query: 1   KAKANEQKYWRHIEEEKVSQXXXXXXXXXXXXIHGEAKLLAKTNGINARKDMLDGLFDLL 180
           K KA++QK WR I+ EK+S+              G+ K+   ++ +  +  +LD     L
Sbjct: 56  KGKADDQKNWRLIQNEKISKLKKKLKSNKELVTQGKVKIERGSSDLKVKYGVLDSARSTL 115

Query: 181 QEKRME-LHKFYSDLICXXXXXXXXXXXXXXXMQSVVIRHLLRAYPLQRISF 333
           ++ R+E + K++ +LIC                QSVV++ + + +PL+R+SF
Sbjct: 116 EKTRVEQVEKYFPNLICTQSLGHMAISSERLHKQSVVVKQICKLFPLRRVSF 167