BLASTX nr result
ID: Ephedra28_contig00023546
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00023546
(384 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002515746.1| DNA polymerase delta catalytic subunit, puta... 103 3e-20
ref|XP_002451581.1| hypothetical protein SORBIDRAFT_04g004200 [S... 96 4e-19
ref|XP_002450450.1| hypothetical protein SORBIDRAFT_05g005680 [S... 96 4e-19
gb|AFW65465.1| hypothetical protein ZEAMMB73_774459 [Zea mays] 96 4e-19
ref|XP_004978893.1| PREDICTED: DNA polymerase delta catalytic su... 96 5e-19
ref|XP_001754656.1| predicted protein [Physcomitrella patens] gi... 97 2e-18
ref|XP_002307042.2| hypothetical protein POPTR_0005s06690g [Popu... 97 3e-18
ref|XP_004143345.1| PREDICTED: DNA polymerase delta catalytic su... 93 3e-18
ref|XP_004173293.1| PREDICTED: DNA polymerase delta catalytic su... 93 3e-18
ref|XP_003577757.1| PREDICTED: DNA polymerase delta catalytic su... 94 4e-18
gb|EMT18649.1| DNA polymerase delta catalytic subunit [Aegilops ... 94 4e-18
ref|XP_001762435.1| predicted protein [Physcomitrella patens] gi... 96 5e-18
gb|EMJ14070.1| hypothetical protein PRUPE_ppa021601mg, partial [... 96 6e-18
gb|ADJ55694.1| DNA polymerase delta catalytic subunit, partial [... 96 6e-18
gb|ADJ55695.1| DNA polymerase delta catalytic subunit, partial [... 94 1e-17
gb|ADJ55693.1| DNA polymerase delta catalytic subunit, partial [... 94 1e-17
ref|XP_004502958.1| PREDICTED: DNA polymerase delta catalytic su... 90 2e-17
gb|ADE77944.1| unknown [Picea sitchensis] 94 2e-17
ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic su... 94 2e-17
ref|XP_006663265.1| PREDICTED: DNA polymerase delta catalytic su... 94 2e-17
>ref|XP_002515746.1| DNA polymerase delta catalytic subunit, putative [Ricinus communis]
gi|223545183|gb|EEF46693.1| DNA polymerase delta
catalytic subunit, putative [Ricinus communis]
Length = 1049
Score = 103 bits (256), Expect = 3e-20
Identities = 52/74 (70%), Positives = 62/74 (83%)
Frame = -1
Query: 369 LNSQYYLDNQLSKPLMRIFEPIMKNASKELLHGSHT*SVSISTPTTGGIMKFAKK*LTRF 190
++ QYYL+NQ+SKPL+RIFEPI+KNASKELLHGSHT S+SISTP+ GGIMKFAKK LT F
Sbjct: 884 IDPQYYLENQISKPLLRIFEPILKNASKELLHGSHTRSISISTPSNGGIMKFAKKQLTYF 943
Query: 189 KRSIHITETSAICT 148
+ HI E IC+
Sbjct: 944 LQVRHI-ERHLICS 956
>ref|XP_002451581.1| hypothetical protein SORBIDRAFT_04g004200 [Sorghum bicolor]
gi|241931412|gb|EES04557.1| hypothetical protein
SORBIDRAFT_04g004200 [Sorghum bicolor]
Length = 1101
Score = 95.9 bits (237), Expect(2) = 4e-19
Identities = 46/58 (79%), Positives = 53/58 (91%)
Frame = -1
Query: 369 LNSQYYLDNQLSKPLMRIFEPIMKNASKELLHGSHT*SVSISTPTTGGIMKFAKK*LT 196
++ QYYL+NQ+SKPL+RIFEPI+KNASKELLHGSHT SVSISTP+ GIMKFAKK LT
Sbjct: 953 IDPQYYLENQISKPLLRIFEPILKNASKELLHGSHTRSVSISTPSNSGIMKFAKKQLT 1010
Score = 24.3 bits (51), Expect(2) = 4e-19
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -2
Query: 143 VSDISFF*GRLWFDCFLLKAP-HPALICQRRRAP 45
VSD+ GRLW C + H ++C R P
Sbjct: 1044 VSDLEMLFGRLWTQCQECQGSLHQDVLCTSRDCP 1077
>ref|XP_002450450.1| hypothetical protein SORBIDRAFT_05g005680 [Sorghum bicolor]
gi|241936293|gb|EES09438.1| hypothetical protein
SORBIDRAFT_05g005680 [Sorghum bicolor]
Length = 1099
Score = 95.9 bits (237), Expect(2) = 4e-19
Identities = 46/58 (79%), Positives = 53/58 (91%)
Frame = -1
Query: 369 LNSQYYLDNQLSKPLMRIFEPIMKNASKELLHGSHT*SVSISTPTTGGIMKFAKK*LT 196
++ QYYL+NQ+SKPL+RIFEPI+KNASKELLHGSHT SVSISTP+ GIMKFAKK LT
Sbjct: 951 IDPQYYLENQISKPLLRIFEPILKNASKELLHGSHTRSVSISTPSNSGIMKFAKKQLT 1008
Score = 24.3 bits (51), Expect(2) = 4e-19
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -2
Query: 143 VSDISFF*GRLWFDCFLLKAP-HPALICQRRRAP 45
VSD+ GRLW C + H ++C R P
Sbjct: 1042 VSDLEMLFGRLWTQCQECQGSLHQDVLCTSRDCP 1075
>gb|AFW65465.1| hypothetical protein ZEAMMB73_774459 [Zea mays]
Length = 373
Score = 95.9 bits (237), Expect(2) = 4e-19
Identities = 46/58 (79%), Positives = 53/58 (91%)
Frame = -1
Query: 369 LNSQYYLDNQLSKPLMRIFEPIMKNASKELLHGSHT*SVSISTPTTGGIMKFAKK*LT 196
++ QYYL+NQ+SKPL+RIFEPI+KNASKELLHGSHT SVSISTP+ GIMKFAKK LT
Sbjct: 225 IDPQYYLENQISKPLLRIFEPILKNASKELLHGSHTRSVSISTPSNSGIMKFAKKQLT 282
Score = 24.3 bits (51), Expect(2) = 4e-19
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -2
Query: 143 VSDISFF*GRLWFDCFLLKAP-HPALICQRRRAP 45
VSD+ GRLW C + H ++C R P
Sbjct: 316 VSDLEMLFGRLWTQCQECQGSLHQDVLCTSRDCP 349
>ref|XP_004978893.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Setaria
italica]
Length = 1105
Score = 95.9 bits (237), Expect(2) = 5e-19
Identities = 46/58 (79%), Positives = 53/58 (91%)
Frame = -1
Query: 369 LNSQYYLDNQLSKPLMRIFEPIMKNASKELLHGSHT*SVSISTPTTGGIMKFAKK*LT 196
++ QYYL+NQ+SKPL+RIFEPI+KNASKELLHGSHT SVSISTP+ GIMKFAKK LT
Sbjct: 957 IDPQYYLENQISKPLLRIFEPILKNASKELLHGSHTRSVSISTPSNSGIMKFAKKQLT 1014
Score = 23.9 bits (50), Expect(2) = 5e-19
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -2
Query: 143 VSDISFF*GRLWFDCFLLKAP-HPALICQRRRAP 45
VSD+ GRLW C + H ++C R P
Sbjct: 1048 VSDLEVLFGRLWTQCQECQGSLHQDVLCTSRDCP 1081
>ref|XP_001754656.1| predicted protein [Physcomitrella patens] gi|162694277|gb|EDQ80626.1|
predicted protein [Physcomitrella patens]
Length = 1156
Score = 97.1 bits (240), Expect = 2e-18
Identities = 45/55 (81%), Positives = 53/55 (96%)
Frame = -1
Query: 369 LNSQYYLDNQLSKPLMRIFEPIMKNASKELLHGSHT*SVSISTPTTGGIMKFAKK 205
++ QYYL+NQLSKPL+R+F+PI+KNASKELLHGSHT SVSISTP+TGGIMKFAKK
Sbjct: 1008 IDPQYYLENQLSKPLLRLFDPILKNASKELLHGSHTRSVSISTPSTGGIMKFAKK 1062
>ref|XP_002307042.2| hypothetical protein POPTR_0005s06690g [Populus trichocarpa]
gi|550338272|gb|EEE94038.2| hypothetical protein
POPTR_0005s06690g [Populus trichocarpa]
Length = 1088
Score = 96.7 bits (239), Expect = 3e-18
Identities = 46/58 (79%), Positives = 54/58 (93%)
Frame = -1
Query: 369 LNSQYYLDNQLSKPLMRIFEPIMKNASKELLHGSHT*SVSISTPTTGGIMKFAKK*LT 196
++ QYYL+NQ+SKPL+RIFEPI+KNASKELL GSHT S+SISTP+TGGIMKFAKK LT
Sbjct: 940 IDPQYYLENQISKPLLRIFEPILKNASKELLQGSHTRSISISTPSTGGIMKFAKKQLT 997
>ref|XP_004143345.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cucumis
sativus]
Length = 1086
Score = 93.2 bits (230), Expect(2) = 3e-18
Identities = 44/58 (75%), Positives = 52/58 (89%)
Frame = -1
Query: 369 LNSQYYLDNQLSKPLMRIFEPIMKNASKELLHGSHT*SVSISTPTTGGIMKFAKK*LT 196
++ QYYL+NQ+SKPL+RIFEPI+KNASKELLHGSHT S+ ISTP+ GIMKFAKK LT
Sbjct: 938 IDPQYYLENQISKPLLRIFEPILKNASKELLHGSHTRSIFISTPSNSGIMKFAKKQLT 995
Score = 23.9 bits (50), Expect(2) = 3e-18
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -2
Query: 143 VSDISFF*GRLWFDCFLLKAP-HPALICQRRRAP 45
VSD+ GRLW C + H ++C R P
Sbjct: 1029 VSDLEMVFGRLWTQCQECQGSLHQDVLCTSRDCP 1062
>ref|XP_004173293.1| PREDICTED: DNA polymerase delta catalytic subunit-like, partial
[Cucumis sativus]
Length = 166
Score = 93.2 bits (230), Expect(2) = 3e-18
Identities = 44/58 (75%), Positives = 52/58 (89%)
Frame = -1
Query: 369 LNSQYYLDNQLSKPLMRIFEPIMKNASKELLHGSHT*SVSISTPTTGGIMKFAKK*LT 196
++ QYYL+NQ+SKPL+RIFEPI+KNASKELLHGSHT S+ ISTP+ GIMKFAKK LT
Sbjct: 18 IDPQYYLENQISKPLLRIFEPILKNASKELLHGSHTRSIFISTPSNSGIMKFAKKQLT 75
Score = 23.9 bits (50), Expect(2) = 3e-18
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -2
Query: 143 VSDISFF*GRLWFDCFLLKAP-HPALICQRRRAP 45
VSD+ GRLW C + H ++C R P
Sbjct: 109 VSDLEMVFGRLWTQCQECQGSLHQDVLCTSRDCP 142
>ref|XP_003577757.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Brachypodium
distachyon]
Length = 1106
Score = 93.6 bits (231), Expect(2) = 4e-18
Identities = 44/58 (75%), Positives = 53/58 (91%)
Frame = -1
Query: 369 LNSQYYLDNQLSKPLMRIFEPIMKNASKELLHGSHT*SVSISTPTTGGIMKFAKK*LT 196
++ QYYL+NQ+SKPL+RIFEPI+KNAS+ELLHGSHT +VSISTP+ GIMKFAKK LT
Sbjct: 958 IDPQYYLENQISKPLLRIFEPILKNASRELLHGSHTRAVSISTPSNSGIMKFAKKQLT 1015
Score = 23.1 bits (48), Expect(2) = 4e-18
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -2
Query: 143 VSDISFF*GRLWFDCFLLKAP-HPALICQRRRAP 45
VSD+ G+LW C + H ++C R P
Sbjct: 1049 VSDLEMLFGKLWTQCQECQGSLHQDVLCTSRDCP 1082
>gb|EMT18649.1| DNA polymerase delta catalytic subunit [Aegilops tauschii]
Length = 1076
Score = 93.6 bits (231), Expect(2) = 4e-18
Identities = 44/58 (75%), Positives = 53/58 (91%)
Frame = -1
Query: 369 LNSQYYLDNQLSKPLMRIFEPIMKNASKELLHGSHT*SVSISTPTTGGIMKFAKK*LT 196
++ QYYL+NQ+SKPL+RIFEPI+KNAS+ELLHGSHT +VSISTP+ GIMKFAKK LT
Sbjct: 928 IDPQYYLENQISKPLLRIFEPILKNASRELLHGSHTRAVSISTPSNSGIMKFAKKQLT 985
Score = 23.1 bits (48), Expect(2) = 4e-18
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -2
Query: 143 VSDISFF*GRLWFDCFLLKAP-HPALICQRRRAP 45
VSD+ G+LW C + H ++C R P
Sbjct: 1019 VSDLEMLFGKLWTQCQECQGSLHQDVLCTSRDCP 1052
>ref|XP_001762435.1| predicted protein [Physcomitrella patens] gi|162686513|gb|EDQ72902.1|
predicted protein [Physcomitrella patens]
Length = 1173
Score = 95.9 bits (237), Expect = 5e-18
Identities = 45/55 (81%), Positives = 52/55 (94%)
Frame = -1
Query: 369 LNSQYYLDNQLSKPLMRIFEPIMKNASKELLHGSHT*SVSISTPTTGGIMKFAKK 205
++ QYYL+NQLSKPL+RIF+PI+KNASKELLHGSHT SVSISTP+ GGIMKFAKK
Sbjct: 1010 IDPQYYLENQLSKPLLRIFDPILKNASKELLHGSHTRSVSISTPSNGGIMKFAKK 1064
>gb|EMJ14070.1| hypothetical protein PRUPE_ppa021601mg, partial [Prunus persica]
Length = 223
Score = 95.5 bits (236), Expect = 6e-18
Identities = 45/58 (77%), Positives = 53/58 (91%)
Frame = -1
Query: 369 LNSQYYLDNQLSKPLMRIFEPIMKNASKELLHGSHT*SVSISTPTTGGIMKFAKK*LT 196
++ QYYL+NQ+SKPL+RIFEPI+KNASKELLHGSHT S+SISTP+ GIMKFAKK LT
Sbjct: 75 IDPQYYLENQISKPLLRIFEPILKNASKELLHGSHTRSISISTPSNSGIMKFAKKQLT 132
>gb|ADJ55694.1| DNA polymerase delta catalytic subunit, partial [Ensete
ventricosum]
Length = 81
Score = 95.5 bits (236), Expect = 6e-18
Identities = 45/58 (77%), Positives = 54/58 (93%)
Frame = -1
Query: 369 LNSQYYLDNQLSKPLMRIFEPIMKNASKELLHGSHT*SVSISTPTTGGIMKFAKK*LT 196
++ QYYL+NQ+SKPL+RIFEPI+KNASKELLHGSHT +VSISTP+ GGIMKFAKK L+
Sbjct: 18 IDPQYYLENQISKPLLRIFEPILKNASKELLHGSHTRAVSISTPSNGGIMKFAKKQLS 75
>gb|ADJ55695.1| DNA polymerase delta catalytic subunit, partial [Strelitzia
nicolai]
Length = 81
Score = 94.4 bits (233), Expect = 1e-17
Identities = 45/58 (77%), Positives = 53/58 (91%)
Frame = -1
Query: 369 LNSQYYLDNQLSKPLMRIFEPIMKNASKELLHGSHT*SVSISTPTTGGIMKFAKK*LT 196
++ QYYL+NQ+SKPL+RIFEPI+KNASKELLHGSHT SVSISTP+ GIMKFAKK L+
Sbjct: 18 IDPQYYLENQISKPLLRIFEPILKNASKELLHGSHTRSVSISTPSNSGIMKFAKKQLS 75
>gb|ADJ55693.1| DNA polymerase delta catalytic subunit, partial [Musella
lasiocarpa]
Length = 81
Score = 94.4 bits (233), Expect = 1e-17
Identities = 45/58 (77%), Positives = 53/58 (91%)
Frame = -1
Query: 369 LNSQYYLDNQLSKPLMRIFEPIMKNASKELLHGSHT*SVSISTPTTGGIMKFAKK*LT 196
++ QYYL+NQ+SKPL+RIFEPI+KNASKELLHGSHT SVSISTP+ GIMKFAKK L+
Sbjct: 18 IDPQYYLENQISKPLLRIFEPILKNASKELLHGSHTRSVSISTPSNSGIMKFAKKQLS 75
>ref|XP_004502958.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cicer
arietinum]
Length = 1087
Score = 90.1 bits (222), Expect(2) = 2e-17
Identities = 40/55 (72%), Positives = 51/55 (92%)
Frame = -1
Query: 369 LNSQYYLDNQLSKPLMRIFEPIMKNASKELLHGSHT*SVSISTPTTGGIMKFAKK 205
++ QYYL+NQ+SKP++RIFEPI+KNASKELLHGSHT S+SISTP+ GIM+FA+K
Sbjct: 939 IDPQYYLENQISKPILRIFEPILKNASKELLHGSHTRSISISTPSNSGIMRFAQK 993
Score = 24.6 bits (52), Expect(2) = 2e-17
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -2
Query: 158 QSAQMVSDISFF*GRLWFDCFLLKAP-HPALICQRRRAP 45
++ VSD+ GRLW C + H ++C R P
Sbjct: 1025 KTVAQVSDLEILFGRLWTQCQECQGSLHQDVLCTSRDCP 1063
>gb|ADE77944.1| unknown [Picea sitchensis]
Length = 228
Score = 94.0 bits (232), Expect = 2e-17
Identities = 45/58 (77%), Positives = 53/58 (91%)
Frame = -1
Query: 369 LNSQYYLDNQLSKPLMRIFEPIMKNASKELLHGSHT*SVSISTPTTGGIMKFAKK*LT 196
++ QYYL+NQLSKPL+RIFEPI+KNASKELLHGSHT +VSISTP+ GIMKFAKK L+
Sbjct: 80 IDPQYYLENQLSKPLLRIFEPILKNASKELLHGSHTRAVSISTPSNSGIMKFAKKQLS 137
>ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic subunit [Vitis vinifera]
gi|296088521|emb|CBI37512.3| unnamed protein product
[Vitis vinifera]
Length = 1089
Score = 94.0 bits (232), Expect = 2e-17
Identities = 44/58 (75%), Positives = 53/58 (91%)
Frame = -1
Query: 369 LNSQYYLDNQLSKPLMRIFEPIMKNASKELLHGSHT*SVSISTPTTGGIMKFAKK*LT 196
++ QYYL+NQ+SKPL+RIFEPI+KNASKELLHGSHT S+SISTP+ GIMKFAKK L+
Sbjct: 941 IDPQYYLENQISKPLLRIFEPILKNASKELLHGSHTRSISISTPSNSGIMKFAKKQLS 998
>ref|XP_006663265.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Oryza
brachyantha]
Length = 1122
Score = 93.6 bits (231), Expect = 2e-17
Identities = 44/58 (75%), Positives = 53/58 (91%)
Frame = -1
Query: 369 LNSQYYLDNQLSKPLMRIFEPIMKNASKELLHGSHT*SVSISTPTTGGIMKFAKK*LT 196
++ QYYL+NQ+SKPL+RIFEPI+KNASKELLHGSHT +VSISTP+ GIM+FAKK LT
Sbjct: 974 IDPQYYLENQISKPLLRIFEPILKNASKELLHGSHTRAVSISTPSNSGIMRFAKKQLT 1031