BLASTX nr result
ID: Ephedra28_contig00023450
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00023450
(552 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006664042.1| PREDICTED: glycine-rich RNA-binding protein ... 79 7e-13
ref|XP_004157450.1| PREDICTED: glycine-rich RNA-binding protein ... 77 2e-12
ref|XP_004137435.1| PREDICTED: glycine-rich RNA-binding protein ... 77 2e-12
ref|NP_001066827.1| Os12g0502200 [Oryza sativa Japonica Group] g... 75 8e-12
gb|EAY83219.1| hypothetical protein OsI_38428 [Oryza sativa Indi... 75 8e-12
gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bamb... 75 1e-11
ref|XP_006585775.1| PREDICTED: glycine-rich RNA-binding protein ... 74 3e-11
ref|XP_004955701.1| PREDICTED: glycine-rich RNA-binding protein ... 74 3e-11
ref|XP_003552565.1| PREDICTED: glycine-rich RNA-binding protein ... 74 3e-11
ref|XP_003531854.1| PREDICTED: glycine-rich RNA-binding protein ... 74 3e-11
gb|ACU23248.1| unknown [Glycine max] 74 3e-11
ref|XP_004971051.1| PREDICTED: glycine-rich RNA-binding protein ... 73 4e-11
gb|ADE76094.1| unknown [Picea sitchensis] 73 5e-11
gb|EMT29403.1| Glycine-rich RNA-binding protein 2, mitochondrial... 72 7e-11
gb|EMS45526.1| Glycine-rich RNA-binding protein 2, mitochondrial... 72 7e-11
ref|XP_004515251.1| PREDICTED: glycine-rich RNA-binding protein ... 72 9e-11
gb|EMT02366.1| Glycine-rich RNA-binding protein 2 [Aegilops taus... 72 9e-11
ref|NP_001045195.1| Os01g0916600 [Oryza sativa Japonica Group] g... 72 9e-11
ref|XP_003564921.1| PREDICTED: glycine-rich RNA-binding protein ... 72 1e-10
emb|CBI30155.3| unnamed protein product [Vitis vinifera] 72 1e-10
>ref|XP_006664042.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
[Oryza brachyantha]
Length = 258
Score = 79.0 bits (193), Expect = 7e-13
Identities = 40/115 (34%), Positives = 71/115 (61%)
Frame = -3
Query: 463 MALAKVLANISQIYTKSSASLLRSFHNTASLNNTKVFVGGLSSDANDKTLTDSFSSYGKI 284
MALA + N+ + T SS SL +S ++++K+FVGGLS ++++L D+F++YG++
Sbjct: 1 MALANKIGNLLKKATSSSPSLYQSIR---CMSSSKLFVGGLSYGTDEQSLRDTFANYGQV 57
Query: 283 VDVYVISQKKTKDPKGFGFIKFSXXXXXXXXXXEMHGKEIDGRKISVKRATIRAA 119
++ +I+ ++T +GFGFI ++ + GK++DGR I V AT R +
Sbjct: 58 IEARIITDRETGRSRGFGFITYTSSEEASAAITALDGKDLDGRNIRVNTATERTS 112
>ref|XP_004157450.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 173
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 9/118 (7%)
Frame = -3
Query: 445 LANISQIYTKSSASLLRS---------FHNTASLNNTKVFVGGLSSDANDKTLTDSFSSY 293
L+ + +I+++SSAS +RS F ++++KVFVGGLS +D+ LT++F+ Y
Sbjct: 4 LSKVGKIFSQSSASGIRSHFQPSNLSVFQTLRFMSSSKVFVGGLSYGTDDQRLTEAFTKY 63
Query: 292 GKIVDVYVISQKKTKDPKGFGFIKFSXXXXXXXXXXEMHGKEIDGRKISVKRATIRAA 119
G++V+ VI + T +GFGF+ F + G+++DGR+I AT RA+
Sbjct: 64 GEVVEARVIMDRDTGRSRGFGFVTFGASEDASSAIQALDGQDLDGRRIRCSYATDRAS 121
>ref|XP_004137435.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 171
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 9/118 (7%)
Frame = -3
Query: 445 LANISQIYTKSSASLLRS---------FHNTASLNNTKVFVGGLSSDANDKTLTDSFSSY 293
L+ + +I+++SSAS +RS F ++++KVFVGGLS +D+ LT++F+ Y
Sbjct: 4 LSKVGKIFSQSSASGIRSHFQPSNLSVFQTLRFMSSSKVFVGGLSYGTDDQRLTEAFTKY 63
Query: 292 GKIVDVYVISQKKTKDPKGFGFIKFSXXXXXXXXXXEMHGKEIDGRKISVKRATIRAA 119
G++V+ VI + T +GFGF+ F + G+++DGR+I AT RA+
Sbjct: 64 GEVVEARVIMDRDTGRSRGFGFVTFGASEDASSAIQALDGQDLDGRRIRCSYATDRAS 121
>ref|NP_001066827.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|77555842|gb|ABA98638.1| RNA recognition motif family
protein, expressed [Oryza sativa Japonica Group]
gi|113649334|dbj|BAF29846.1| Os12g0502200 [Oryza sativa
Japonica Group] gi|125579440|gb|EAZ20586.1| hypothetical
protein OsJ_36195 [Oryza sativa Japonica Group]
gi|215694288|dbj|BAG89281.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215708787|dbj|BAG94056.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 258
Score = 75.5 bits (184), Expect = 8e-12
Identities = 38/113 (33%), Positives = 69/113 (61%)
Frame = -3
Query: 463 MALAKVLANISQIYTKSSASLLRSFHNTASLNNTKVFVGGLSSDANDKTLTDSFSSYGKI 284
MALA + N+ + T SS +L +S ++++K+FVGGLS ++++L D+F++YG++
Sbjct: 1 MALANKIGNLLKRATSSSPALYQSIR---CMSSSKLFVGGLSYGTDEQSLRDTFANYGQV 57
Query: 283 VDVYVISQKKTKDPKGFGFIKFSXXXXXXXXXXEMHGKEIDGRKISVKRATIR 125
++ +I+ ++T +GFGFI ++ + GK++DGR I V A R
Sbjct: 58 IEAKIINDRETGRSRGFGFITYASSEEASAAITALDGKDLDGRNIRVNTANER 110
>gb|EAY83219.1| hypothetical protein OsI_38428 [Oryza sativa Indica Group]
Length = 257
Score = 75.5 bits (184), Expect = 8e-12
Identities = 38/113 (33%), Positives = 69/113 (61%)
Frame = -3
Query: 463 MALAKVLANISQIYTKSSASLLRSFHNTASLNNTKVFVGGLSSDANDKTLTDSFSSYGKI 284
MALA + N+ + T SS +L +S ++++K+FVGGLS ++++L D+F++YG++
Sbjct: 1 MALANKIGNLLKRATSSSPALYQSIR---CMSSSKLFVGGLSYGTDEQSLRDTFANYGQV 57
Query: 283 VDVYVISQKKTKDPKGFGFIKFSXXXXXXXXXXEMHGKEIDGRKISVKRATIR 125
++ +I+ ++T +GFGFI ++ + GK++DGR I V A R
Sbjct: 58 IEAKIINDRETGRSRGFGFITYASSEEASAAITALDGKDLDGRNIRVNTANER 110
>gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bambusa oldhamii]
Length = 162
Score = 75.1 bits (183), Expect = 1e-11
Identities = 39/105 (37%), Positives = 61/105 (58%)
Frame = -3
Query: 433 SQIYTKSSASLLRSFHNTASLNNTKVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQKK 254
S + + +S + N A L +TK+FVGGLS +D++L D+F+S+G++V+ VI+ +
Sbjct: 14 SALASSASTGSTPAMFNAARLMSTKLFVGGLSWGTDDQSLKDAFTSFGEVVEARVITDRD 73
Query: 253 TKDPKGFGFIKFSXXXXXXXXXXEMHGKEIDGRKISVKRATIRAA 119
T +GFGF+ FS M G+E++GR I V A R A
Sbjct: 74 TGKSRGFGFVSFSNGDDAKNAMSSMDGQELEGRNIHVNFANERPA 118
>ref|XP_006585775.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
isoform X2 [Glycine max]
gi|571472960|ref|XP_006585776.1| PREDICTED: glycine-rich
RNA-binding protein 3, mitochondrial-like isoform X3
[Glycine max] gi|571472962|ref|XP_006585777.1|
PREDICTED: glycine-rich RNA-binding protein 3,
mitochondrial-like isoform X4 [Glycine max]
Length = 249
Score = 73.6 bits (179), Expect = 3e-11
Identities = 38/106 (35%), Positives = 66/106 (62%)
Frame = -3
Query: 439 NISQIYTKSSASLLRSFHNTASLNNTKVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQ 260
+I+Q ++ S+ SL ++ S+++ K+FVGG+S +D +L +SF+ YG+++DV VI
Sbjct: 22 HINQDFSVSTPSLFQAIR---SMSSAKLFVGGISYSTDDMSLRESFARYGEVIDVKVIMD 78
Query: 259 KKTKDPKGFGFIKFSXXXXXXXXXXEMHGKEIDGRKISVKRATIRA 122
++T +GFGFI F+ M G+++ GR+I V AT R+
Sbjct: 79 RETGRSRGFGFITFATSEDASSAIQGMDGQDLHGRRIRVNYATERS 124
>ref|XP_004955701.1| PREDICTED: glycine-rich RNA-binding protein 7-like [Setaria
italica]
Length = 307
Score = 73.6 bits (179), Expect = 3e-11
Identities = 35/82 (42%), Positives = 49/82 (59%)
Frame = -3
Query: 361 KVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQKKTKDPKGFGFIKFSXXXXXXXXXXE 182
++FVGGLS D + TLT +F YGK++D V+ ++ T +GFGF+ FS
Sbjct: 8 RIFVGGLSWDTTEGTLTRTFGQYGKVIDAQVVVERDTGRSRGFGFVTFSEPRAVDAAIRG 67
Query: 181 MHGKEIDGRKISVKRATIRAAE 116
MH E+DGR ISV +A R A+
Sbjct: 68 MHNGELDGRNISVNKAQPRNAD 89
>ref|XP_003552565.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
[Glycine max]
Length = 244
Score = 73.6 bits (179), Expect = 3e-11
Identities = 37/106 (34%), Positives = 66/106 (62%)
Frame = -3
Query: 439 NISQIYTKSSASLLRSFHNTASLNNTKVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQ 260
+I+Q ++ S+ SL ++ S+++ K+FVGG+S +D +L +SF+ YG+++DV VI
Sbjct: 18 HINQDFSASTPSLFQAIR---SMSSAKLFVGGISYSTDDMSLRESFARYGEVIDVKVIMD 74
Query: 259 KKTKDPKGFGFIKFSXXXXXXXXXXEMHGKEIDGRKISVKRATIRA 122
++T +GFGF+ F+ M G+++ GR+I V AT R+
Sbjct: 75 RETGRSRGFGFVTFATSEDASSAIQGMDGQDLHGRRIRVNYATERS 120
>ref|XP_003531854.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
isoform X1 [Glycine max]
Length = 245
Score = 73.6 bits (179), Expect = 3e-11
Identities = 38/106 (35%), Positives = 66/106 (62%)
Frame = -3
Query: 439 NISQIYTKSSASLLRSFHNTASLNNTKVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQ 260
+I+Q ++ S+ SL ++ S+++ K+FVGG+S +D +L +SF+ YG+++DV VI
Sbjct: 18 HINQDFSVSTPSLFQAIR---SMSSAKLFVGGISYSTDDMSLRESFARYGEVIDVKVIMD 74
Query: 259 KKTKDPKGFGFIKFSXXXXXXXXXXEMHGKEIDGRKISVKRATIRA 122
++T +GFGFI F+ M G+++ GR+I V AT R+
Sbjct: 75 RETGRSRGFGFITFATSEDASSAIQGMDGQDLHGRRIRVNYATERS 120
>gb|ACU23248.1| unknown [Glycine max]
Length = 243
Score = 73.6 bits (179), Expect = 3e-11
Identities = 37/106 (34%), Positives = 66/106 (62%)
Frame = -3
Query: 439 NISQIYTKSSASLLRSFHNTASLNNTKVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQ 260
+I+Q ++ S+ SL ++ S+++ K+FVGG+S +D +L +SF+ YG+++DV VI
Sbjct: 18 HINQDFSASTPSLFQAIR---SMSSAKLFVGGISYSTDDMSLRESFARYGEVIDVKVIMD 74
Query: 259 KKTKDPKGFGFIKFSXXXXXXXXXXEMHGKEIDGRKISVKRATIRA 122
++T +GFGF+ F+ M G+++ GR+I V AT R+
Sbjct: 75 RETGRSRGFGFVTFATSEDASSAIQGMDGQDLHGRRIRVNYATERS 120
>ref|XP_004971051.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Setaria italica]
Length = 168
Score = 73.2 bits (178), Expect = 4e-11
Identities = 37/103 (35%), Positives = 60/103 (58%)
Frame = -3
Query: 433 SQIYTKSSASLLRSFHNTASLNNTKVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQKK 254
S + + + AS + N A L +TK+FVGGLS +D+TL +FS++G++ + +I+ ++
Sbjct: 14 SALTSGAPASSAPALFNAARLMSTKLFVGGLSWGTDDQTLRQAFSTFGEVTEARIITDRE 73
Query: 253 TKDPKGFGFIKFSXXXXXXXXXXEMHGKEIDGRKISVKRATIR 125
T +GFGF+ FS M G+E+DGR + V A R
Sbjct: 74 TGRSRGFGFVNFSNSDEAKEAVSSMDGQELDGRSVRVNFANER 116
>gb|ADE76094.1| unknown [Picea sitchensis]
Length = 150
Score = 72.8 bits (177), Expect = 5e-11
Identities = 39/92 (42%), Positives = 54/92 (58%)
Frame = -3
Query: 367 NTKVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQKKTKDPKGFGFIKFSXXXXXXXXX 188
N K+FVGGLS D N+K L D+FS YG+I++V VI + + KGFGF++F+
Sbjct: 34 NKKLFVGGLSFDTNEKVLRDAFSLYGEILEVRVIINRASGLSKGFGFVQFASETDAVNAL 93
Query: 187 XEMHGKEIDGRKISVKRATIRAAEKQKKRRTV 92
EM G+ +DGR I V A RA + + V
Sbjct: 94 KEMDGQSLDGRNIRVNFANTRARQDSAPPKAV 125
>gb|EMT29403.1| Glycine-rich RNA-binding protein 2, mitochondrial [Aegilops
tauschii]
Length = 244
Score = 72.4 bits (176), Expect = 7e-11
Identities = 39/115 (33%), Positives = 66/115 (57%)
Frame = -3
Query: 463 MALAKVLANISQIYTKSSASLLRSFHNTASLNNTKVFVGGLSSDANDKTLTDSFSSYGKI 284
MAL L N+ + T S+ +L ++ ++++K+FVGGLS + ++ +L D+FS YG+I
Sbjct: 26 MALVNKLGNLLKKATSSNPTLYQAIR---CMSSSKLFVGGLSFNTDEGSLRDAFSHYGEI 82
Query: 283 VDVYVISQKKTKDPKGFGFIKFSXXXXXXXXXXEMHGKEIDGRKISVKRATIRAA 119
+D +I + T +GFGFI ++ + GK++ GR + V AT R A
Sbjct: 83 IDAKIIVDRDTGRSRGFGFITYAAEEQASSAIMALDGKDLHGRNLRVSAATERTA 137
>gb|EMS45526.1| Glycine-rich RNA-binding protein 2, mitochondrial [Triticum urartu]
Length = 247
Score = 72.4 bits (176), Expect = 7e-11
Identities = 39/115 (33%), Positives = 66/115 (57%)
Frame = -3
Query: 463 MALAKVLANISQIYTKSSASLLRSFHNTASLNNTKVFVGGLSSDANDKTLTDSFSSYGKI 284
MAL L N+ + T S+ +L ++ ++++K+FVGGLS + ++ +L D+FS YG+I
Sbjct: 22 MALVNKLGNLLKKATSSNPTLYQAIR---CMSSSKLFVGGLSFNTDEGSLRDAFSHYGEI 78
Query: 283 VDVYVISQKKTKDPKGFGFIKFSXXXXXXXXXXEMHGKEIDGRKISVKRATIRAA 119
+D +I + T +GFGFI ++ + GK++ GR + V AT R A
Sbjct: 79 IDAKIIVDRDTGRSRGFGFITYAAEEQASSAIMALDGKDLHGRNLRVSAATERTA 133
>ref|XP_004515251.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Cicer arietinum]
Length = 183
Score = 72.0 bits (175), Expect = 9e-11
Identities = 36/109 (33%), Positives = 65/109 (59%)
Frame = -3
Query: 433 SQIYTKSSASLLRSFHNTASLNNTKVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQKK 254
S + KSS S+L +++S +TK++V GLS +++L ++F ++G++V+V ++ K
Sbjct: 69 SSLRNKSSCSVLACLPSSSSSPSTKLYVSGLSFRTTEESLRNAFKNFGQLVEVNLVMDKV 128
Query: 253 TKDPKGFGFIKFSXXXXXXXXXXEMHGKEIDGRKISVKRATIRAAEKQK 107
P+GFGF+++ MHGK +DGR I V+ A R+ +Q+
Sbjct: 129 ANRPRGFGFLRYETEEESKKAIEGMHGKFLDGRVIFVEVAKPRSKIQQR 177
>gb|EMT02366.1| Glycine-rich RNA-binding protein 2 [Aegilops tauschii]
Length = 318
Score = 72.0 bits (175), Expect = 9e-11
Identities = 33/82 (40%), Positives = 51/82 (62%)
Frame = -3
Query: 379 ASLNNTKVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQKKTKDPKGFGFIKFSXXXXX 200
A ++++FVGGLS +++ L D+F +GK+VD ++ ++ T +GFGF+ FS
Sbjct: 2 AGKEDSRIFVGGLSFHTDERKLEDAFRRFGKVVDTQIMLERHTNRHRGFGFVTFSDPRAV 61
Query: 199 XXXXXEMHGKEIDGRKISVKRA 134
+MH KE+DGR ISV RA
Sbjct: 62 ETAINDMHNKELDGRTISVNRA 83
>ref|NP_001045195.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|2624328|emb|CAA05729.1| OsGRP2 [Oryza sativa Japonica
Group] gi|19386753|dbj|BAB86134.1| OsGRP2 [Oryza sativa
Japonica Group] gi|20805007|dbj|BAB92683.1| OsGRP2
[Oryza sativa Japonica Group]
gi|113534726|dbj|BAF07109.1| Os01g0916600 [Oryza sativa
Japonica Group] gi|125528847|gb|EAY76961.1| hypothetical
protein OsI_04919 [Oryza sativa Indica Group]
gi|125573102|gb|EAZ14617.1| hypothetical protein
OsJ_04542 [Oryza sativa Japonica Group]
gi|215765299|dbj|BAG86996.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215768370|dbj|BAH00599.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 150
Score = 72.0 bits (175), Expect = 9e-11
Identities = 37/103 (35%), Positives = 60/103 (58%)
Frame = -3
Query: 433 SQIYTKSSASLLRSFHNTASLNNTKVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQKK 254
S + + +SA + N A L +TK+FVGGLS + ND +L ++F+S+G + + VI+ ++
Sbjct: 14 SGLTSSASAGSSPAMFNAARLMSTKLFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDRE 73
Query: 253 TKDPKGFGFIKFSXXXXXXXXXXEMHGKEIDGRKISVKRATIR 125
+ +GFGF+ F+ M GKE++GR I V A R
Sbjct: 74 SGRSRGFGFVSFANGDDAKSAMDAMDGKELEGRSIRVNFANER 116
>ref|XP_003564921.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 156
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/98 (37%), Positives = 56/98 (57%)
Frame = -3
Query: 412 SASLLRSFHNTASLNNTKVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQKKTKDPKGF 233
SA + N A + K+FVGGLS ND +L ++FSS+G++ + VI+ ++T +GF
Sbjct: 21 SAGSAPAMFNAARFMSNKLFVGGLSWGTNDGSLKEAFSSFGEVYEARVITDRETGRSRGF 80
Query: 232 GFIKFSXXXXXXXXXXEMHGKEIDGRKISVKRATIRAA 119
GF++FS M G+E+DGR + V A R A
Sbjct: 81 GFVEFSNEEDAKKAASSMDGQELDGRSVRVNFANERPA 118
>emb|CBI30155.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/76 (44%), Positives = 51/76 (67%)
Frame = -3
Query: 361 KVFVGGLSSDANDKTLTDSFSSYGKIVDVYVISQKKTKDPKGFGFIKFSXXXXXXXXXXE 182
++FVGGL + +++ L D+FS YGKI++ V+ ++ T P+GFGFI F+ E
Sbjct: 8 RIFVGGLGWNTSERHLEDAFSRYGKILESLVMMERDTGRPRGFGFITFADHRAMEDAIRE 67
Query: 181 MHGKEIDGRKISVKRA 134
MHG+E+DGR ISV +A
Sbjct: 68 MHGRELDGRVISVNKA 83